Pre_GI: BLASTP Hits

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Query: NC_021182:4427468:4430951 Clostridium pasteurianum BC1, complete genome

Start: 4430951, End: 4433158, Length: 2208

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009495:183767:2021422021422043762235Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehelicase, RecD/TraA family0969
NC_003366:2494907:2494907249490724971412235Clostridium perfringens str. 13, complete genomeexodeoxyribonuclease V alpha subunit0870
NC_008261:2708929:2708929270892927111632235Clostridium perfringens ATCC 13124, complete genomehelicase, RecD/TraA family0870
NC_010723:485874:5040445040445062632220Clostridium botulinum E3 str. Alaska E43, complete genomehelicase, RecD/TraA family0788
NC_009633:760872:7692317692317714952265Alkaliphilus metalliredigens QYMF chromosome, complete genomerecombinase D0693
NC_018664:239000:2433912433912456162226Clostridium acidurici 9a chromosome, complete genomeRecD/TraA family helicase RecD0692
NC_009922:2721343:2731601273160127338472247Alkaliphilus oremlandii OhILAs, complete genomehelicase, RecD/TraA family0687
NC_009012:2661795:2675408267540826776482241Clostridium thermocellum ATCC 27405, complete genomehelicase, RecD/TraA family0650
NC_020134:2772500:2784877278487727870902214Clostridium stercorarium subsp. stercorarium DSM 8532, completehelicase, RecD/TraA family7e-164578
NC_012796:4075583:4125454412545441276252172Desulfovibrio magneticus RS-1, complete genomehelicase RecD/TraA family protein2e-156553
NC_012796:2090000:2095549209554920977262178Desulfovibrio magneticus RS-1, complete genomehelicase RecD/TraA family protein5e-155548
NC_010511:6067000:6080978608097860832122235Methylobacterium sp. 4-46 chromosome, complete genomerecombinase D2e-136487
NC_011757:5693584:5700531570053157027832253Methylobacterium chloromethanicum CM4, complete genomehelicase, RecD/TraA family3e-136486
NC_019697:1696000:1699454169945417017062253Chamaesiphon minutus PCC 6605, complete genomehelicase, putative, RecD/TraA family1e-135484
NC_003155:6444500:6456160645616064584362277Streptomyces avermitilis MA-4680, complete genomeexodeoxyribonuclease V3e-135482
NC_010125:2884762:2896416289641628986022187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease4e-135482
NC_008609:1976403:2006218200621820084042187Pelobacter propionicus DSM 2379, complete genomehelicase, RecD/TraA family8e-135481
NC_008554:2308500:2328598232859823307962199Syntrophobacter fumaroxidans MPOB, complete genomehelicase, RecD/TraA family1e-134480
NC_014833:2988814:2995209299520929974672259Ruminococcus albus 7 chromosome, complete genomehelicase, RecD/TraA family3e-134479
NC_011365:1103927:1116217111621711184032187Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehelicase, RecD/TraA family5e-134478
NC_013929:6526745:6536994653699465392552262Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein4e-133475
NC_010125:955863:9835099835099856952187Gluconacetobacter diazotrophicus PAl 5, complete genomeputative exodeoxyribonuclease V alpha chain2e-132473
NC_010793:81219:8427684276864712196Orientia tsutsugamushi str. Ikeda, complete genomeexodeoxyribonuclease V alpha subunit4e-131469
NC_010172:5447189:83038303105042202Methylobacterium extorquens PA1, complete genomehelicase, RecD/TraA family6e-131468
NC_011027:817311:8179938179938201942202Chlorobaculum parvum NCIB 8327, complete genomehelicase, RecD/TraA family6e-128458
NC_014365:2037506:2059009205900920611712163Desulfarculus baarsii DSM 2075 chromosome, complete genomehelicase, RecD/TraA family7e-122438
NC_010337:2339056:2339823233982323419762154Heliobacterium modesticaldum Ice1, complete genomeexodeoxyribonuclease V, alpha chain, RecD1e-117424
NC_015573:776209:7777177777177798042088Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelicase, RecD/TraA family7e-116418
NC_017285:671546:6896006896006917982199Chlamydophila pneumoniae LPCoLN chromosome, complete genomeRecD/TraA family helicase3e-114413
NC_002179:667182:6852326852326874302199Chlamydophila pneumoniae AR39, complete genomeexodeoxyribonuclease V, alpha subunit3e-114413
NC_017200:4191963:4208883420888342112192337Bacillus thuringiensis serovar finitimus YBT-020 chromosome,exodeoxyribonuclease V subunit alpha2e-103377
NC_010184:4219257:4234557423455742368932337Bacillus weihenstephanensis KBAB4, complete genomehelicase, RecD/TraA family8e-103375
NC_005957:4169610:4187265418726541896012337Bacillus thuringiensis serovar konkukian str. 97-27, completeexodeoxyribonuclease V, alpha subunit7e-103375
NC_014335:4113154:4129812412981241321482337Bacillus cereus biovar anthracis str. CI chromosome, completeRecD/TraA family helicase6e-103375
NC_011772:4321117:4336135433613543384712337Bacillus cereus G9842, complete genomeputative helicase5e-103375
NC_011969:4065460:4084245408424540865812337Bacillus cereus Q1 chromosome, complete genomeexodeoxyribonuclease v, alpha subunit1e-102374
NC_011658:4171237:4188885418888541912212337Bacillus cereus AH187 chromosome, complete genomeputative helicase1e-102374
NC_007530:4176462:4198106419810642004182313Bacillus anthracis str. 'Ames Ancestor', complete genomehelicase, putative2e-102373
NC_006448:1568000:1576578157657815790822505Streptococcus thermophilus LMG 18311, complete genomeexodeoxyribonuclease V2e-88327
NC_006449:1572000:1580139158013915826432505Streptococcus thermophilus CNRZ1066, complete genomeexodeoxyribonuclease V1e-87325
NC_012925:191501:2111252111252136142490Streptococcus suis P1/7, complete genomehypothetical protein1e-84314
NC_014365:2037506:2040817204081720430452229Desulfarculus baarsii DSM 2075 chromosome, complete genomeATP-dependent RecD/TraA family DNA helicase5e-81302
NC_017187:1305805:1319745131974513220722328Arcobacter butzleri ED-1, complete genomeexodeoxyribonuclease V subunit alpha3e-59230
NC_017955:2494640:2540042254004225419881947Modestobacter marinus, complete genomeATP-dependent exoDNAse subunit alpha/helicase superfamily I protein1e-47191
NC_014117:442616:4932384932384955112274Burkholderia sp. CCGE1002 chromosome chromosome 1, completeAAA ATPase2e-45184
NC_008435:2658986:2722151272215127243102160Rhodopseudomonas palustris BisA53, complete genomehypothetical protein3e-37157
NC_014394:2577949:2590285259028525926032319Gallionella capsiferriformans ES-2 chromosome, complete genomeAAA ATPase3e-32140
NC_015725:926824:9456689456689479382271Mycoplasma bovis Hubei-1 chromosome, complete genomeexodeoxyribonuclease V subunit alpha5e-32140
NC_008740:2563278:2574464257446425767072244Marinobacter aquaeolei VT8, complete genomeAAA ATPase3e-31137
NC_019940:2546500:2565827256582725677221896Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit alpha3e-30134
NC_018645:4945698:4951424495142449534392016Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit alpha3e-30134
NC_008639:1573971:1590428159042815921731746Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, alpha subunit3e-30134
NC_010803:1436397:1452865145286514546311767Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, alpha subunit4e-30133
NC_004459:1794540:1794540179454017966542115Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse alpha subunit2e-29131
NC_010498:3023442:3039266303926630410921827Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, alpha subunit1e-26122
NC_017271:4852351:4871059487105948733682310Xanthomonas campestris pv. raphani 756C chromosome, completeexodeoxyribonuclease V subunit alpha2e-26121
NC_008577:3485878:3495433349543334975982166Shewanella sp. ANA-3 chromosome 1, complete sequenceAAA ATPase2e-26121
NC_003910:187630:2001942001942025602367Colwellia psychrerythraea 34H, complete genomeputative helicase5e-26120
NC_010694:3055403:3053556305355630554061851Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V alpha chain8e-26119
NC_007712:3382000:3399933339993334017921860Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V alpha subunit8e-26119
NC_007613:2699500:2713369271336927151951827Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit2e-25118
NC_013361:3823347:3839171383917138409971827Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit alpha2e-25118
NC_007946:3125577:3141071314107131428971827Escherichia coli UTI89, complete genomeexodeoxyribonuclease V alpha chain1e-25118
NC_011742:3057444:3072950307295030747761827Escherichia coli S88 chromosome, complete genomeexonuclease V subunit alpha1e-25118
NC_008253:2965573:2981289298128929831151827Escherichia coli 536, complete genomeexodeoxyribonuclease V alpha chain1e-25118
NC_011745:3197584:3213407321340732152331827Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit alpha1e-25118
NC_011663:674069:6824066824066845592154Shewanella baltica OS223 chromosome, complete genomeATPase AAA9e-25115
NC_009665:639914:6482456482456503982154Shewanella baltica OS185 chromosome, complete genomeATPase AAA9e-25115
NC_015740:3678342:3676216367621636783452130Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit alpha4e-24113
NC_015573:776209:8021148021148046932580Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein2e-22108
NC_010172:798923:808552808552809130579Methylobacterium extorquens PA1, complete genomehelicase, RecD/TraA family2e-22108
NC_010814:1441327:1446527144652714501713645Geobacter lovleyi SZ, complete genomeExodeoxyribonuclease V9e-21102
NC_015713:2453409:2463825246382524652491425Simkania negevensis Z chromosome gsn.131, complete genomeexodeoxyribonuclease V subunit alpha1e-20102
NC_009481:1365000:1385306138530613869191614Synechococcus sp. WH 7803 chromosome, complete genomeexodeoxyribonuclease V subunit alpha2e-20101
NC_014370:885937:9236959236959272943600Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein5e-1996.7
NC_004061:498483:5020345020345038421809Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 67 kDa polypeptide1e-1895.1
NC_002663:564958:5936695936695956421974Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecD2e-1894.7
NC_010688:4991410:5009134500913450113682235Xanthomonas campestris pv. campestris, complete genomeexodeoxyribonuclease V alpha chain3e-1791.3
NC_003902:4989855:5006813500681350090502238Xanthomonas campestris pv. campestris str. ATCC 33913, completeexodeoxyribonuclease V alpha chain3e-1790.9
NC_007086:5064053:5079498507949850817352238Xanthomonas campestris pv. campestris str. 8004, complete genomeexodeoxyribonuclease V alpha chain3e-1790.9
NC_015562:1413264:1422784142278414260893306Methanotorris igneus Kol 5 chromosome, complete genomeexodeoxyribonuclease V5e-1687
NC_017259:480656:4806564806564824641809Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,exodeoxyribonuclease V 67 kDa polypeptide1e-1585.9
NC_014924:3334386:3352228335222833541021875Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit2e-1585.1
NC_018691:3496420:3496420349642034983661947Alcanivorax dieselolei B5 chromosome, complete genomeExodeoxyribonuclease V alpha chain5e-1583.6
NC_013851:3478153:3493536349353634957582223Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit2e-1378.2
NC_015437:1066014:109637710963771096679303Selenomonas sputigena ATCC 35185 chromosome, complete genome3e-1377.8
NC_016048:522637:5316525316525329381287Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1377.8
NC_011206:2512667:2519649251964925216011953Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, alpha subunit2e-1275.1
NC_015703:4348545:4363702436370243651201419Runella slithyformis DSM 19594 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V)3e-1274.3
NC_015177:258504:2653212653212667121392Pedobacter saltans DSM 12145 chromosome, complete genomeexonuclease V subunit alpha4e-1273.9
NC_012791:4794362:4818231481823148203572127Variovorax paradoxus S110 chromosome 1, complete genomeexodeoxyribonuclease V, alpha subunit1e-1172.4
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA6e-1066.6
NC_012969:2136243:2176677217667721802433567Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) subunit alpha9e-1066.2
NC_015160:2295010:2295010229501022964281419Odoribacter splanchnicus DSM 20712 chromosome, complete genomeexonuclease V subunit alpha7e-1066.2
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA4e-0963.9
NC_020054:3501467:350146735014673502270804Fibrella aestuarina BUZ 2 drat genomeexonuclease V subunit alpha5e-0860.5
NC_014500:2479814:2498288249828825003332046Dickeya dadantii 3937 chromosome, complete genomeexonuclease V (RecBCD complex), subunit alpha5e-0860.5
NC_009718:731670:7465657465657488292265Fervidobacterium nodosum Rt17-B1, complete genomeribonuclease H2e-0655.1
NC_010803:1436397:145115714511571451498342Chlorobium limicola DSM 245, complete genome3e-0654.3