Pre_GI: BLASTP Hits

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Query: NC_021182:3771523:3775854 Clostridium pasteurianum BC1, complete genome

Start: 3775854, End: 3776483, Length: 630

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016894:3935161:393829339382933938850558Acetobacterium woodii DSM 1030 chromosome, complete genometranscriptional regulator TetR family5e-1581.3
NC_015160:3301938:331932233193223319924603Odoribacter splanchnicus DSM 20712 chromosome, complete genomeregulatory protein TetR2e-1272.4
NC_019673:1988853:199991619999162000491576Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family6e-1167.4
NC_013517:3948500:395255239525523953115564Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, TetR family1e-1066.2
NC_016023:755237:772087772087772674588Bacillus coagulans 36D1 chromosome, complete genomeTetR family transcriptional regulator2e-1065.9
NC_017186:7480714:749817374981737498775603Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator4e-0961.6
NC_014318:7480669:749812874981287498730603Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator4e-0961.6
NC_014960:115614:129255129255129923669Anaerolinea thermophila UNI-1, complete genomeTetR family transcriptional regulator9e-0960.5
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family8e-0960.5
NC_010814:155834:180041180041180643603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family1e-0859.7
NC_016609:6177651:619097561909756191586612Niastella koreensis GR20-10 chromosome, complete genomeTetR family transcriptional regulator2e-0859.3
NC_015578:465814:467379467379467957579Treponema primitia ZAS-2 chromosome, complete genomeTetR family transcriptional regulator3e-0858.5
NC_002570:1041342:106282010628201063431612Bacillus halodurans C-125, complete genometranscriptional regulator (TetR/AcrR family)4e-0858.2
NC_015690:1186545:126198612619861262594609Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator TetR7e-0857.4
NC_013740:1081454:109380010938001094408609Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, TetR family7e-0857.4
NC_018870:81396:813968139682133738Thermacetogenium phaeum DSM 12270 chromosome, complete genomeTetR-like transcriptional regulator6e-0857.4
NC_016641:3058571:307113930711393071465327Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator1e-0756.2
NC_015738:220000:232217232217232804588Eggerthella sp. YY7918, complete genometranscriptional regulator2e-0755.8
NC_011983:1746000:174603617460361746614579Agrobacterium radiobacter K84 chromosome 2, complete genometranscriptional regulator protein2e-0755.5
NC_013510:5499447:554217355421735542841669Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family3e-0755.1
NC_004461:205068:209357209357209896540Staphylococcus epidermidis ATCC 12228, complete genometranscriptional regulator4e-0754.7
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator4e-0754.7
NC_010002:4256651:428231342823134282894582Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family5e-0754.3
NC_013854:1277106:128092412809241281535612Azospirillum sp. B510, complete genometranscriptional regulator1e-0653.5
NC_019896:3311000:333368833336883334557870Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeHTH-type transcriptional regulator YerO1e-0653.5
NC_004193:375416:664955664955665572618Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0653.5
NC_008595:1176658:118911011891101189715606Mycobacterium avium 104, complete genometranscriptional regulator1e-0653.5
NC_014479:700281:700281700281701126846Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative TetR/AcrR family transcriptional regulator1e-0653.5
NC_020244:747762:747762747762748610849Bacillus subtilis XF-1, complete genomeputative transcriptional regulator1e-0653.5
NC_015690:3477573:348976134897613490366606Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_015738:1971211:198791219879121988565654Eggerthella sp. YY7918, complete genomehypothetical protein1e-0653.1
NC_003869:74836:778127781278402591Thermoanaerobacter tengcongensis MB4, complete genomeTranscriptional regulator1e-0653.1
NC_010067:4149298:416320141632014163884684Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0653.1
NC_004461:73390:913299132991874546Staphylococcus epidermidis ATCC 12228, complete genometranscriptional regulator tetR-family1e-0653.1
NC_016935:4038265:404800040480004048605606Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator1e-0652.8
NC_015953:3159234:316659831665983167191594Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_018515:3108755:313167231316723132274603Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator2e-0652.8
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome2e-0652.4
NC_014831:1843835:186181618618161862391576Thermaerobacter marianensis DSM 12885 chromosome, complete genomeregulatory protein TetR2e-0652.4
NC_003212:2293425:229890822989082299471564Listeria innocua Clip11262, complete genomehypothetical protein3e-0652
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR3e-0652
NC_003888:4377000:438203043820304382620591Streptomyces coelicolor A3(2), complete genomeTetR-family transcriptional regulator2e-0652
NC_018691:2254566:226531422653142265982669Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator4e-0651.6
NC_016935:3819500:384780138478013848349549Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_015172:1120000:112611211261121126714603Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, TetR family5e-0651.2
NC_010001:1702350:170682917068291707374546Clostridium phytofermentans ISDg, complete genometranscriptional regulator, TetR family4e-0651.2
NC_015567:1127780:116122211612221161902681Serratia sp. AS9 chromosome, complete genomeTetR family transcriptional regulator4e-0651.2
NC_015566:1127595:116103711610371161717681Serratia sp. AS12 chromosome, complete genomeTetR family transcriptional regulator4e-0651.2
NC_012881:1062629:107115510711551071790636Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, TetR family6e-0650.8
NC_014209:81643:119504119504120079576Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, TetR family8e-0650.4
NC_014364:667841:686921686921687466546Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, TetR family8e-0650.4
NC_014551:691594:691594691594692448855Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (TetR/AcrR family)9e-0650.1