Pre_GI: BLASTP Hits

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Query: NC_021182:3438601:3453143 Clostridium pasteurianum BC1, complete genome

Start: 3453143, End: 3453961, Length: 819

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:1077721:109436110943611095182822Clostridium pasteurianum BC1, complete genomenitrogenase iron protein1e-145515
NC_021182:3438601:345170334517033452524822Clostridium pasteurianum BC1, complete genomenitrogenase iron protein1e-144511
NC_014328:522045:526644526644527462819Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein9e-135479
NC_011837:3052000:306813730681373068955819Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-131468
NC_015687:279641:283890283890284708819Clostridium acetobutylicum DSM 1731 chromosome, complete genomenitrogenase iron protein, nitrogenase component II, nifH1e-130466
NC_003030:279643:283892283892284710819Clostridium acetobutylicum ATCC 824, complete genomeNitrogenase iron protein (nitrogenase component II) gene nifH1e-130466
NC_017295:279633:283882283882284700819Clostridium acetobutylicum EA 2018 chromosome, complete genomeNitrogenase iron protein (nitrogenase component II) gene nifH1e-130466
NC_015275:521436:552805552805553623819Clostridium lentocellum DSM 5427 chromosome, complete genomenitrogenase iron protein5e-130463
NC_011837:1056888:106932810693281070164837Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-129462
NC_014328:2588994:258899425889942589821828Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein1e-128459
NC_016627:1452688:145674114567411457562822Clostridium clariflavum DSM 19732 chromosome, complete genomeMo-nitrogenase iron protein subunit NifH7e-124443
NC_009012:1901492:190149219014921902346855Clostridium thermocellum ATCC 27405, complete genomenitrogenase iron protein2e-122438
NC_014632:1514500:152536715253671526206840Ilyobacter polytropus DSM 2926 chromosome, complete genomeMo-nitrogenase iron protein subunit NifH3e-119428
NC_013410:1285857:132961413296141330459846Fibrobacter succinogenes subsp. succinogenes S85 chromosome,nitrogenase iron protein3e-119427
NC_011565:777929:782754782754783578825Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,nitrogenase iron protein NifH2e-114411
NC_011027:1763952:177015317701531770977825Chlorobaculum parvum NCIB 8327, complete genomenitrogenase iron protein3e-114411
NC_009437:2579161:261322226132222614043822Caldicellulosiruptor saccharolyticus DSM 8903, complete genomenitrogenase iron protein6e-114410
NC_014216:2860342:286034228603422861169828Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomenitrogenase iron protein1e-111402
NC_003552:4782635:478928147892814790102822Methanosarcina acetivorans C2A, complete genomenitrogenase (iron protein)1e-110399
NC_003901:860242:866092866092866913822Methanosarcina mazei Go1, complete genomenitrogenase reductase1e-110399
NC_020389:714178:718602718602719423822Methanosarcina mazei Tuc01, complete genomeNitrogenase (molybdenum-iron) reductase and maturation protein NifH3e-110397
NC_012881:478042:488297488297489124828Desulfovibrio salexigens DSM 2638, complete genomenitrogenase iron protein2e-109395
NC_015416:525018:539892539892540707816Methanosaeta concilii GP-6 chromosome, complete genomeNitrogenase iron protein 22e-109394
NC_011296:1636242:164824116482411649065825Thermodesulfovibrio yellowstonii DSM 11347, complete genomenitrogenase iron protein2e-108391
NC_013959:826868:871214871214872092879Sideroxydans lithotrophicus ES-1 chromosome, complete genomenitrogenase iron protein8e-108390
NC_009767:5230790:524411752441175244938822Roseiflexus castenholzii DSM 13941, complete genomenitrogenase iron protein5e-107387
NC_013799:1012884:103549210354921036331840Hydrogenobacter thermophilus TK-6, complete genomenitrogenase iron protein3e-106384
NC_017161:1012874:103548210354821036321840Hydrogenobacter thermophilus TK-6 chromosome, complete genomenitrogenase iron protein3e-106384
NC_000916:1417981:142679614267961427695900Methanothermobacter thermautotrophicus str. Delta H, completenitrogenase NifH subunit7e-104376
NC_010546:553774:565791565791566774984Cyanothece sp. ATCC 51142 chromosome circular, complete sequencenitrogenase iron protein1e-103376
NC_012560:4929683:496022749602274961054828Azotobacter vinelandii DJ, complete genomenitrogenase iron protein9e-103373
NC_021150:4929670:496021449602144961041828Azotobacter vinelandii CA6, complete genomenitrogenase reductase9e-103373
NC_008278:7409711:742064674206467421641996Frankia alni ACN14a, complete genomeNitrogenase iron protein (Nitrogenase component II) (Nitrogenase Fe protein) (Nitrogenase reductase, Dinitrogenase reductase)2e-102372
NC_009135:620312:632911632911633738828Methanococcus maripaludis C5, complete genomenitrogenase iron protein5e-102370
NC_005791:837505:844090844090844917828Methanococcus maripaludis S2, complete genomenitrogenase iron protein (nitrogenase component II)6e-102370
NC_015847:909938:916494916494917321828Methanococcus maripaludis XI chromosome, complete genomenitrogenase reductase6e-102370
NC_011894:4066926:407208240720824072981900Methylobacterium nodulans ORS 2060, complete genomenitrogenase iron protein1e-101369
NC_009975:1682000:169483816948381695665828Methanococcus maripaludis C6, complete genomenitrogenase iron protein3e-101368
NC_013771:684966:694680694680695543864Cyanobacterium UCYN-A, complete genomeMo-nitrogenase iron protein subunit NifH3e-101367
NC_009634:53555:636316363164458828Methanococcus vannielii SB chromosome, complete genomenitrogenase reductase5e-101367
NC_015636:1123053:113701911370191137870852Methanothermococcus okinawensis IH1 chromosome, complete genomeNitrogenase iron protein3e-100364
NC_004463:1898648:192856719285671929451885Bradyrhizobium japonicum USDA 110, complete genomedinitrogenase reductase protein7e-99360
NC_017249:8283701:832504183250418325925885Bradyrhizobium japonicum USDA 6, complete genomedinitrogenase reductase protein7e-99360
NC_010529:296500:333073333073333954882Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNifH nitrogenase Fe protein (Nitrogenase component II)(dinitrogenase reductase)1e-98359
NC_013887:17160:263522635227209858Methanocaldococcus sp. FS406-22 chromosome, complete genomenitrogenase iron protein5e-97353
NC_014166:33138:480634806348977915Arcobacter nitrofigilis DSM 7299 chromosome, complete genomenitrogenase iron protein1e-95349
NC_017192:20404:304673046731381915Arcobacter sp. L, complete genomenitrogenase reductase1e-95349
NC_016641:2815974:282154828215482822414867Paenibacillus terrae HPL-003 chromosome, complete genomenitrogenase iron protein subunit NifH1e-93342
NC_009635:518000:526772526772527644873Methanococcus aeolicus Nankai-3 chromosome, complete genomenitrogenase reductase-like protein7e-76283
NC_018664:2279687:229227122922712293146876Clostridium acidurici 9a chromosome, complete genomenitrogenase iron protein NifH2e-75282
NC_015562:1189111:121275812127581213624867Methanotorris igneus Kol 5 chromosome, complete genomenitrogenase iron protein1e-74279
NC_009635:1283830:129230412923041293140837Methanococcus aeolicus Nankai-3 chromosome, complete genomenitrogenase reductase-like protein4e-74278
NC_013665:849508:905738905738906589852Methanocella paludicola SANAE, complete genomeputative nitrogenase iron protein7e-71267
NC_011830:1923158:194184319418431942598756Desulfitobacterium hafniense DCB-2, complete genomeNitrogenase2e-68258
NC_015573:2187688:218932221893222190308987Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeNitrogenase iron protein5e-68257
NC_007955:1108000:112038211203821121176795Methanococcoides burtonii DSM 6242, complete genomeNitrogenase1e-65249
NC_014002:1408085:141614414161441416941798Methanohalophilus mahii DSM 5219 chromosome, complete genomeMo-nitrogenase iron protein subunit NifH2e-65248
NC_003552:2502689:2521860252186025241272268Methanosarcina acetivorans C2A, complete genomenitrogen fixation protein NifH/NifE4e-63241
NC_014328:2518081:252805225280522528822771Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein1e-60233
NC_011830:1623452:164160116416011642380780Desulfitobacterium hafniense DCB-2, complete genomeNitrogenase2e-59229
NC_014328:2518081:253584425358442536605762Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein1e-58226
NC_009840:544816:548498548498549385888Prochlorococcus marinus str. MIT 9215, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein1e-39163
NC_005072:508827:512474512474513361888Prochlorococcus marinus subsp. pastoris str. CCMP1986, completeProtochlorophyllide reductase iron-sulfur ATP-binding protein1e-39163
NC_008817:539349:542990542990543877888Prochlorococcus marinus str. MIT 9515, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein3e-39162
NC_005042:513931:517788517788518678891Prochlorococcus marinus subsp. marinus str. CCMP1375, completeChlL2e-39162
NC_007577:503440:507116507116508003888Prochlorococcus marinus str. MIT 9312, complete genomelight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein2e-39162
NC_008816:518895:522570522570523457888Prochlorococcus marinus str. AS9601, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein2e-39162
NC_009091:493302:496978496978497865888Prochlorococcus marinus str. MIT 9301, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein1e-38160
NC_007335:1820332:182274318227431823633891Prochlorococcus marinus str. NATL2A, complete genomelight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein9e-38157
NC_008819:541000:542607542607543497891Prochlorococcus marinus str. NATL1A, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein9e-38157
NC_016024:1099602:111210711121071112991885Candidatus Chloracidobacterium thermophilum B chromosome chromosomechlorophyllide reductase iron protein subunit X7e-35147
NC_019940:3267436:3285102328510232861181017Thioflavicoccus mobilis 8321 chromosome, complete genomechlorophyllide reductase iron protein subunit X7e-32137
NC_000909:597692:612906612906613667762Methanocaldococcus jannaschii DSM 2661, complete genomenitrogenase reductase (nifH2)6e-0755.1
NC_006085:2544421:254955525495552550541987Propionibacterium acnes KPA171202, complete genomechromosome partitioning protein ParA2e-0653.5
NC_014039:2479500:248462024846202485606987Propionibacterium acnes SK137 chromosome, complete genomeCobQ/CobB/MinD/ParA nucleotide binding domain protein2e-0653.5
NC_016511:2482500:248791224879122488898987Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeCobQ/CobB/MinD/ParA nucleotide binding domain-containing protein2e-0653.5
NC_016512:2506898:251203225120322513018987Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeCobQ/CobB/MinD/ParA nucleotide binding domain-containing protein2e-0653.5
NC_016516:2473500:247876924787692479755987Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeCobQ/CobB/MinD/ParA nucleotide binding domain-containing protein2e-0653.5
NC_016609:4997414:5010584501058450116271044Niastella koreensis GR20-10 chromosome, complete genomeCobyrinic acid ac-diamide synthase2e-0653.1
NC_013929:5135285:514608151460815147076996Streptomyces scabiei 87.22 chromosome, complete genomechromosome partitioning protein3e-0652.8
NC_013887:1462918:146445514644551465207753Methanocaldococcus sp. FS406-22 chromosome, complete genomeCobyrinic acid ac-diamide synthase3e-0652.4
NC_013156:573037:579234579234579998765Methanocaldococcus fervens AG86, complete genomeCobyrinic acid ac-diamide synthase5e-0652
NC_014828:1987487:201299620129962013814819Ethanoligenens harbinense YUAN-3 chromosome, complete genomechromosome partitioning protein ParA5e-0651.6
NC_014210:5752651:576285357628535763806954Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Cobyrinic acid ac-diamide synthase7e-0651.2
NC_009952:3596399:363935536393553640161807Dinoroseobacter shibae DFL 12, complete genomechromosome partitioning protein ParA8e-0651.2