Pre_GI: BLASTP Hits

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Query: NC_021182:2667408:2675484 Clostridium pasteurianum BC1, complete genome

Start: 2675484, End: 2675735, Length: 252

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009454:1389974:138997413899741390225252Pelotomaculum thermopropionicum SI, complete genomehypothetical protein4e-22103
NC_018866:611588:613380613380613649270Dehalobacter sp. DCA chromosome, complete genomeRNA-binding protein Hfq7e-22102
NC_018867:677848:677848677848678093246Dehalobacter sp. CF chromosome, complete genomeRNA-binding protein Hfq9e-22102
NC_017167:1405626:141191214119121412172261Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1RNA chaperone Hfq6e-2095.9
NC_016641:4290350:430267443026744302919246Paenibacillus terrae HPL-003 chromosome, complete genomeHfq protein4e-1993.2
NC_014335:3461115:346857534685753468799225Bacillus cereus biovar anthracis str. CI chromosome, completeRNA-binding protein Hfq1e-1685.1
NC_003909:3483244:349117634911763491400225Bacillus cereus ATCC 10987, complete genomeRNA-binding protein Hfq1e-1685.1
NC_011773:3547507:355538035553803555604225Bacillus cereus AH820 chromosome, complete genomeRNA-binding protein Hfq1e-1685.1
NC_012581:709234:722219722219722443225Bacillus anthracis str. CDC 684 chromosome, complete genomeRNA-binding protein Hfq1e-1685.1
NC_008343:1250869:125086912508691251150282Granulibacter bethesdensis CGDNIH1, complete genomeRNA-binding protein, Hfq family8e-1579
NC_014836:312353:318232318232318462231Desulfurispirillum indicum S5 chromosome, complete genomeRNA chaperone Hfq5e-1373.2
NC_008009:5139896:515081651508165151106291Acidobacteria bacterium Ellin345, complete genomeHost factor Hfq1e-1272
NC_014758:1573023:158695215869521587452501Calditerrivibrio nitroreducens DSM 19672 chromosome, completeRNA chaperone hfq1e-1271.6
NC_009257:1023696:103990710399071040236330Francisella tularensis subsp. tularensis WY96-3418 chromosome,host factor I for bacteriophage Q beta replication3e-1270.5
NC_008601:1094041:111027111102711110600330Francisella tularensis subsp. novicida U112, complete genomehost factor I for bacteriophage Q beta replication3e-1270.5
NC_012438:1514376:153820515382051538459255Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeRNA chaperone Hfq4e-1270.1
NC_010995:3640913:365895536589553659221267Cellvibrio japonicus Ueda107, complete genomeHfq protein1e-1168.6
NC_016513:1185241:118658011865801186876297Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeHost factor-I protein1e-1168.6
NC_013416:875758:877097877097877393297Aggregatibacter actinomycetemcomitans D11S-1, complete genomeprotein hfq (Host factor-I protein)1e-1168.6
NC_013939:148706:152329152329152829501Deferribacter desulfuricans SSM1, complete genomesmall nuclear ribonucleoprotein3e-1167
NC_016632:120500:137636137636137944309Serratia symbiotica str. 'Cinara cedri' chromosome, completeRNA-binding protein Hfq3e-1167
NC_015222:2136657:214878821487882149033246Nitrosomonas sp. AL212 chromosome, complete genomeRNA chaperone Hfq8e-1165.9
NC_015276:2804874:281567428156742815919246Marinomonas mediterranea MMB-1 chromosome, complete genomeProtein hfq8e-1165.9
NC_015731:867377:873984873984874229246Nitrosomonas sp. Is79A3 chromosome, complete genomeProtein hfq9e-1165.5
NC_009654:2958316:297630229763022976547246Marinomonas sp. MWYL1, complete genomeRNA chaperone Hfq2e-1064.3