Some Help

Query: NC_021182:2536000:2554208 Clostridium pasteurianum BC1, complete genome

Start: 2554208, End: 2555176, Length: 969

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011837:3272752:327410432741043274958855Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-63243
NC_009706:3341250:334260233426023343456855Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein1e-63243
NC_004557:1141558:115367911536791154602924Clostridium tetani E88, complete genomephage terminase small subunit1e-56220
NC_009495:2479465:250173525017352502586852Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephage terminase small subunit2e-43176
UCMB5137:861734:861734861734862534801Bacillus atrophaeus UCMB-5137PBSX defective prophage terminase (small subunit)2e-42172
NC_021182:554000:571398571398572165768Clostridium pasteurianum BC1, complete genomehypothetical protein3e-28125
NC_008497:1111891:111633811163381117096759Lactobacillus brevis ATCC 367, complete genomehypothetical protein5e-27122
NC_014483:3339926:334996233499623350648687Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein8e-24111
NC_014319:1613611:163053816305381631290753Leuconostoc gasicomitatum LMG 18811, complete genomeprophage terminase small subunit2e-1997.1
NC_009617:1897887:191596319159631916745783Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephage-related terminase small subunit-like protein2e-1583.6
NC_012563:2680246:268024626802462680815570Clostridium botulinum A2 str. Kyoto, complete genomeputative phage terminase, small subunit6e-1271.6
NC_014483:3339926:335089233508923351317426Paenibacillus polymyxa E681 chromosome, complete genomeDNA segregation ATPase FtsK/SpoIIIE2e-1066.6
NC_021171:254000:258661258661259392732Bacillus sp. 1NLA3E, complete genomeputative DNA binding protein1e-0861.2
NC_009706:2023912:203678020367802037562783Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein1e-0860.8
NC_019896:1483073:153011915301191530892774Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-0859.7
NC_006322:2851215:285786428578642858250387Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-0652.4
NC_006270:2850354:285700328570032857389387Bacillus licheniformis ATCC 14580, complete genomehypothetical protein5e-0652.4