Pre_GI: BLASTP Hits

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Query: NC_021182:2536000:2550809 Clostridium pasteurianum BC1, complete genome

Start: 2550809, End: 2551507, Length: 699

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:554000:564461564461565159699Clostridium pasteurianum BC1, complete genomeaspartate racemase5e-130463
NC_003295:199354:234952234952235641690Ralstonia solanacearum GMI1000, complete genomePUTATIVE ASPARTATE RACEMASE PROTEIN5e-49194
NC_013446:2062862:207646020764602077155696Comamonas testosteroni CNB-2, complete genomeaspartate racemase9e-45179
NC_014011:1264165:127799512779951278681687Aminobacterium colombiense DSM 12261 chromosome, complete genomeaspartate racemase2e-40166
NC_003413:1521080:155854015585401559235696Pyrococcus furiosus DSM 3638, complete genomeputative aspartate racemase1e-36153
NC_009712:2092440:210683321068332107555723Candidatus Methanoregula boonei 6A8, complete genomeaspartate racemase2e-36152
NC_016609:6750111:678376867837686784457690Niastella koreensis GR20-10 chromosome, complete genomeaspartate racemase7e-36150
NC_013926:829665:834044834044834721678Aciduliprofundum boonei T469 chromosome, complete genomeaspartate racemase4e-34144
NC_013665:415998:434716434716435417702Methanocella paludicola SANAE, complete genomeaspartate racemase5e-33141
NC_014551:2510000:254602625460262546724699Bacillus amyloliquefaciens DSM 7, complete genomeAspartate racemase5e-33140
NC_020410:2509057:251292025129202513618699Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completePutative aspartate racemase4e-32137
NC_015681:401084:407809407809408528720Thermodesulfatator indicus DSM 15286 chromosome, complete genomeaspartate racemase6e-32137
NC_011026:1681852:169944916994491700183735Chloroherpeton thalassium ATCC 35110, complete genomeaspartate racemase7e-32137
NC_012881:3520956:353218835321883532877690Desulfovibrio salexigens DSM 2638, complete genomeaspartate racemase2e-31135
NC_015500:159199:176739176739177431693Treponema brennaborense DSM 12168 chromosome, complete genomeaspartate racemase6e-31134
NC_013517:4208939:423640342364034237098696Sebaldella termitidis ATCC 33386, complete genomeaspartate racemase1e-30133
NC_019942:987134:101040910104091011083675Aciduliprofundum sp. MAR08-339, complete genomeaspartate racemase1e-30133
NC_014006:924417:936197936197936892696Sphingobium japonicum UT26S chromosome 1, complete genomeputative aspartate/glutamate racemase9e-31133
NC_016147:2266419:226973222697322270424693Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative resistance protein2e-30132
NC_016147:2266419:227886422788642279574711Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative resistance protein1e-29130
NC_009800:2995958:299826429982642998956693Escherichia coli HS, complete genomeaspartate racemase family protein4e-29128
NC_010468:906957:940068940068940760693Escherichia coli ATCC 8739, complete genomeaspartate racemase4e-29128
NC_011748:3196173:319709531970953197787693Escherichia coli 55989, complete genomeputative racemase4e-29128
NC_009801:3175714:317663631766363177328693Escherichia coli E24377A, complete genomeaspartate racemase family protein4e-29128
CP002516:903241:935341935341936033693Escherichia coli KO11, complete genomeaspartate racemase4e-29128
NC_002695:3702344:370234437023443703036693Escherichia coli O157:H7 str. Sakai, complete genomeputative resistance proteins4e-29128
CU928145:3196173:319709531970953197787693Escherichia coli 55989 chromosome, complete genomeputative racemase4e-29128
CP002185:3167738:317004431700443170736693Escherichia coli W, complete genomepredicted racemase4e-29128
CU928160:3030324:303124630312463031938693Escherichia coli IAI1 chromosome, complete genomeputative racemase4e-29128
NC_013353:3474077:347499934749993475691693Escherichia coli O103:H2 str. 12009, complete genomeracemase4e-29128
AP010958:3474077:347499934749993475691693Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted racemase4e-29128
NC_011751:3285646:3286568328656832876351068Escherichia coli UMN026 chromosome, complete genomeputative racemase4e-29128
NC_011353:3805819:380674138067413807433693Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeracemase4e-29128
NC_011415:3217796:321871832187183219410693Escherichia coli SE11 chromosome, complete genomeputative racemase4e-29128
NC_011741:3030324:303124630312463031938693Escherichia coli IAI1 chromosome, complete genomeputative racemase4e-29128
NC_012759:2862807:286511328651132865805693Escherichia coli BW2952 chromosome, complete genomeputative racemase3e-29128
NC_010473:3069529:307183530718353072527693Escherichia coli str. K-12 substr. DH10B, complete genomepredicted racemase3e-29128
NC_000913:2975659:297796529779652978657693Escherichia coli K12, complete genomepredicted racemase3e-29128
AC_000091:2976293:297859929785992979291693Escherichia coli W3110 DNA, complete genomepredicted racemase3e-29128
NC_016048:3611146:362779336277933628488696Oscillibacter valericigenes Sjm18-20, complete genomeaspartate racemase3e-29128
NC_011750:3407500:340847734084773409169693Escherichia coli IAI39 chromosome, complete genomeputative racemase3e-29128
NC_016902:903241:935341935341936033693Escherichia coli KO11FL chromosome, complete genomeaspartate racemase4e-29128
NC_016822:3282654:328496032849603285652693Shigella sonnei 53G, complete genomeputative racemase4e-29128
NC_013941:3540420:354042035404203541112693Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeresistance protein4e-29128
NC_013364:3552284:355320635532063553898693Escherichia coli O111:H- str. 11128, complete genomeputative racemase4e-29128
NC_013361:3867558:386848038684803869172693Escherichia coli O26:H11 str. 11368 chromosome, complete genomeracemase4e-29128
NC_013008:3761467:376146737614673762159693Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeracemase4e-29128
NC_007086:2887875:296496129649612965665705Xanthomonas campestris pv. campestris str. 8004, complete genomeputative resistance protein2e-28125
NC_002655:3769643:376964337696433770335693Escherichia coli O157:H7 EDL933, complete genomeputative resistance proteins3e-28125
NC_013192:1824174:182969618296961830391696Leptotrichia buccalis DSM 1135, complete genomeaspartate racemase9e-28123
NC_015556:515641:524448524448525146699Pseudomonas fulva 12-X chromosome, complete genomeaspartate racemase2e-27122
NC_017075:3165858:319285731928573193573717Rubrivivax gelatinosus IL144, complete genomeaspartate racemase4e-27121
NC_009348:3819271:384248838424883843207720Aeromonas salmonicida subsp. salmonicida A449, complete genomeaspartate racemase1e-25116
NC_000961:597385:597385597385598071687Pyrococcus horikoshii OT3, complete genomeaspartate racemase7e-25114
NC_008392:1029134:105709610570961057800705Burkholderia cepacia AMMD chromosome 3, complete sequenceaspartate racemase3e-24111
NC_007384:3151344:315226631522663152913648Shigella sonnei Ss046, complete genome9e-24110
NC_016612:361417:374528374528375220693Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative racemase2e-22105
NC_010557:679656:725608725608726225618Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceaspartate racemase2e-21102
NC_009142:5647737:565601356560135656768756Saccharopolyspora erythraea NRRL 2338, complete genomeaspartate racemase3e-21102
NC_014500:1646854:166670616667061667422717Dickeya dadantii 3937 chromosome, complete genomeputative aspartate racemase3e-1892
NC_007948:5026122:504146750414675042198732Polaromonas sp. JS666, complete genomeAspartate racemase8e-1787.4
NC_020410:495184:514630514630515310681Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative amino-acid racemase1e-1583.6
NC_014618:4657719:468570046857004686434735Enterobacter cloacae SCF1 chromosome, complete genomeaspartate racemase1e-1583.2
NC_009725:496443:528210528210528890681Bacillus amyloliquefaciens FZB42, complete genomeRacX8e-1580.5
NC_020272:3396800:342665734266573427337681Bacillus amyloliquefaciens IT-45, complete genomeaspartate racemase1e-1480.1
NC_019842:484933:522218522218522898681Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,aspartate racemase1e-1480.1
NC_014551:483773:493886493886494566681Bacillus amyloliquefaciens DSM 7, complete genomeamino acid racemase2e-1479.3
NC_017190:466236:479815479815480495681Bacillus amyloliquefaciens LL3 chromosome, complete genomeamino acid racemase2e-1479.3
NC_017191:467207:487387487387488067681Bacillus amyloliquefaciens XH7 chromosome, complete genomeamino acid racemase6e-1477.8
NC_017188:461177:481365481365482045681Bacillus amyloliquefaciens TA208 chromosome, complete genomeaspartate racemase6e-1477.8
NC_009484:2442923:246428824642882464965678Acidiphilium cryptum JF-5 chromosome, complete genomeAsp/Glu racemase6e-1477.8
NC_015677:1460000:146540814654081466145738Ramlibacter tataouinensis TTB310 chromosome, complete genomeaspartate racemase1e-1273.6
NC_011295:1120584:112754711275471128266720Coprothermobacter proteolyticus DSM 5265, complete genomeaspartate racemase1e-1273.6
NC_012125:4716000:474932047493204750054735Salmonella enterica subsp. enterica serovar Paratyphi C strainaspartate racemase2e-1169.3
NC_006905:4638707:467200546720054672739735Salmonella enterica subsp. enterica serovar Choleraesuis strputative aspartate racemase2e-1169.3
NC_015761:4355335:437758243775824378316735Salmonella bongori NCTC 12419, complete genomeaspartate racemase4e-1168.6
NC_007948:4620661:462609346260934626818726Polaromonas sp. JS666, complete genomeAspartate racemase1e-0963.2
NC_010498:1094000:110588911058891106608720Escherichia coli SMS-3-5, complete genomeaspartate racemase1e-0963.2
NC_016830:4639388:4645685464568546471811497Pseudomonas fluorescens F113 chromosome, complete genomeaspartate racemase2e-0962.8
NC_011744:688000:704687704687705370684Vibrio splendidus LGP32 chromosome 2, complete genomeputative aspartate racemase2e-0962.4
NC_013421:1954915:195752019575201958236717Pectobacterium wasabiae WPP163, complete genomeaspartate racemase1e-0860.1
NC_011883:1182000:119259811925981193314717Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,aspartate racemase4e-0755.1
NC_006270:2850354:286942128694212870236816Bacillus licheniformis ATCC 14580, complete genomeglutamate racemase4e-0652
NC_006322:2851215:286963428696342870452819Bacillus licheniformis ATCC 14580, complete genomeRacE4e-0651.6