Pre_GI: BLASTP Hits

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Query: NC_021182:2536000:2549002 Clostridium pasteurianum BC1, complete genome

Start: 2549002, End: 2549733, Length: 732

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:1200993:121347112134711214031561Cronobacter turicensis, complete genomehypothetical protein2e-1686.3
NC_009255:1369200:137188513718851372367483Burkholderia vietnamiensis G4 chromosome 2, complete sequencepathogenesis-related transcriptional factor and ERF protein1e-1480.1
NC_014313:165490:171132171132171617486Hyphomicrobium denitrificans ATCC 51888 chromosome, completePathogenesis-related transcriptional factor and ERF protein2e-1376.3
NC_017328:335160:342492342492343031540Shigella flexneri 2002017 chromosome, complete genomeHNH endonuclease1e-1273.2
NC_007964:328825:334182334182334670489Nitrobacter hamburgensis X14, complete genomeHNH endonuclease1e-1170.5
NC_011035:541560:542831542831543349519Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein1e-1170.5
NC_010002:3509506:352074335207433521243501Delftia acidovorans SPH-1, complete genomePathogenesis-related transcriptional factor and ERF protein1e-1170.1
NC_002695:3468873:348963034896303490196567Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1169.7
NC_013008:3525428:354861535486153549181567Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1169.7
NC_002655:3538656:355695335569533557558606Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933Y1e-1169.7
NC_013361:3112023:312237631223763122942567Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-1169.7
NC_013364:2645438:264601526460152646581567Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-1169.7
NC_013364:2898964:291234129123412912907567Escherichia coli O111:H- str. 11128, complete genomeputative endonuclease1e-1169.7
NC_011601:717072:735907735907736335429Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendonuclease5e-1168.2
NC_007493:1672163:168911316891131689598486Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative endonuclease1e-1067
NC_012914:1851102:186774018677401868279540Paenibacillus sp. JDR-2, complete genomePathogenesis-related transcriptional factor and ERF protein1e-1067
NC_003210:2362306:236313523631352363632498Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-1066.2
NC_002946:1020175:106320710632071063725519Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein3e-1065.9
NC_014246:1457992:146055114605511461048498Mobiluncus curtisii ATCC 43063 chromosome, complete genomebacteriophage protein3e-1065.5
NC_011770:860944:871763871763872272510Pseudomonas aeruginosa LESB58, complete genomeEndY1e-0963.2
NC_012808:4078459:408567340856734086149477Methylobacterium extorquens AM1, complete genomeHNH endonuclease family protein5e-0961.6
NC_009049:2131017:214029221402922140522231Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencePathogenesis-related transcriptional factor and ERF protein1e-0860.5
NC_011001:2085986:210140821014082101989582Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative phage-related endonuclease6e-0857.8
NC_009255:1369200:137403913740391374575537Burkholderia vietnamiensis G4 chromosome 2, complete sequenceHNH endonuclease2e-0755.8
NC_010002:3509506:354012335401233540641519Delftia acidovorans SPH-1, complete genomehypothetical protein3e-0755.5
NC_011770:2690501:272554427255442726101558Pseudomonas aeruginosa LESB58, complete genomehypothetical protein4e-0755.1
NC_016818:859181:872860872860873357498Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeHNH endonuclease8e-0754.3
NC_014624:2912527:292674529267452927386642Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0653.9
NC_010002:3509506:352002335200233520547525Delftia acidovorans SPH-1, complete genomePathogenesis-related transcriptional factor and ERF protein1e-0653.5
NC_017223:3608749:362717336271733627673501Bordetella pertussis CS chromosome, complete genomehypothetical protein1e-0653.5
NC_002929:3568106:358698835869883587488501Bordetella pertussis Tohama I, complete genomehypothetical protein1e-0653.5
NC_002927:3716894:373800537380053738505501Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-0652.8
NC_002927:2338549:236126123612612361761501Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-0652.8
NC_007493:1672163:169739016973901697896507Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePossible Endonuclease3e-0652.4