Pre_GI: BLASTP Hits

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Query: NC_021182:2536000:2542211 Clostridium pasteurianum BC1, complete genome

Start: 2542211, End: 2543161, Length: 951

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009617:1897887:190585519058551906775921Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeRecT protein2e-83308
NC_010610:755000:7667607667607677881029Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-57222
NC_010609:880196:885352885352886281930Lactobacillus reuteri JCM 1112, complete genomehypothetical protein3e-56219
NC_009513:870837:875993875993876922930Lactobacillus reuteri F275, complete genomeRecT protein3e-56219
NC_008571:2582674:259642225964222597363942Gramella forsetii KT0803, complete genomeRecT family protein2e-54213
NC_016052:842762:848325848325849290966Tetragenococcus halophilus NBRC 12172, complete genomeputative RecT protein1e-51203
NC_002758:2101137:211521621152162116136921Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein4e-51201
NC_010079:2102856:211736821173682118288921Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible recombination protein RecT4e-51201
NC_017338:2034698:206934620693462070266921Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative phage-related DNA recombination protein4e-51201
NC_017351:2074000:210307321030732103993921Staphylococcus aureus subsp. aureus 11819-97 chromosome, completerecombinase, phage RecT family protein4e-51201
NC_017351:643674:651432651432652352921Staphylococcus aureus subsp. aureus 11819-97 chromosome, completerecombinase, phage RecT family protein4e-51201
NC_017341:2127815:214754621475462148466921Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative phage-related DNA recombination protein9e-51200
NC_015428:1483768:150039815003981501345948Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeRecT protein2e-47189
NC_009632:361229:369954369954370874921Staphylococcus aureus subsp. aureus JH1 chromosome, completeRecT protein5e-47188
NC_009487:362475:369884369884370804921Staphylococcus aureus subsp. aureus JH9 chromosome, completeRecT protein5e-47188
NC_009632:2148767:216018321601832161103921Staphylococcus aureus subsp. aureus JH1 chromosome, completeRecT protein5e-47188
NC_009487:2148316:216030921603092161229921Staphylococcus aureus subsp. aureus JH9 chromosome, completeRecT protein5e-47188
NC_009513:1184000:119456111945611195550990Lactobacillus reuteri F275, complete genomeRecT protein7e-46184
NC_014554:2159782:217425821742582175157900Lactobacillus plantarum subsp. plantarum ST-III chromosome,recombination protein RecT3e-42172
NC_015558:1425271:144215114421511443086936Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein3e-40165
NC_013198:1095591:111129111112911112166876Lactobacillus rhamnosus GG, complete genomeRecT protein4e-39161
NC_013199:845000:850121850121850996876Lactobacillus rhamnosus Lc 705, complete genomeprophage protein5e-39161
NC_009699:2733529:273431327343132735116804Clostridium botulinum F str. Langeland chromosome, complete genomerecombinase5e-1478.6
NC_009495:2685646:268643026864302687233804Clostridium botulinum A str. ATCC 3502 chromosome, complete genomerecombinase, phage RecT family5e-1478.6
NC_017208:694500:700832700832701638807Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA-binding phage-related protein5e-1065.5
NC_020134:420500:426773426773427588816Clostridium stercorarium subsp. stercorarium DSM 8532, completeprotein RecT8e-0961.2
NC_002655:2142587:216290221629022163711810Escherichia coli O157:H7 EDL933, complete genomerecombinase, DNA renaturation protein encoded by prophage CP-933R1e-0860.8
NC_016831:1734292:175921117592111760041831Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphage recombination protein7e-0858.2
CP002185:1493280:150252315025231503332810Escherichia coli W, complete genomeRac prophage; recombination and repair protein1e-0757.8
NC_010473:1493983:150140415014041502213810Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; recombination and repair protein1e-0757.8
CP002516:2580774:260251826025182603327810Escherichia coli KO11, complete genomeRecT protein1e-0757.8
NC_000913:1404000:141200814120081412817810Escherichia coli K12, complete genomeRac prophage; recombination and repair protein1e-0757.8
AC_000091:1407693:141569814156981416507810Escherichia coli W3110 DNA, complete genomerecombination and repair protein1e-0757.8
NC_011415:1472500:147741214774121478221810Escherichia coli SE11 chromosome, complete genomerecombination and repair protein RecT1e-0757.8
NC_012759:1296000:130406713040671304876810Escherichia coli BW2952 chromosome, complete genomerecombination and repair protein RecT1e-0757.8
NC_012947:2366000:238242123824212383230810Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completerecombination and repair protein RecT1e-0757.8
NC_012967:1403733:141115414111541411963810Escherichia coli B str. REL606 chromosome, complete genomerecombination and repair protein RecT1e-0757.8
NC_016902:2580774:260251826025182603327810Escherichia coli KO11FL chromosome, complete genomeRecT protein1e-0757.8
NC_010002:2110953:211638421163842117307924Delftia acidovorans SPH-1, complete genomeRecT protein9e-0857.8
NC_011205:1345511:135360813536081354438831Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853recombination and repair protein RecT1e-0757.4
AP010958:2911741:291079429107942911744951Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted DNA recombination protein Bet2e-0757
NC_013353:2911741:291079429107942911744951Escherichia coli O103:H2 str. 12009, complete genomeDNA recombination protein Bet2e-0757
NC_002927:2338549:234097023409702341956987Bordetella bronchiseptica RB50, complete genomephage-related DNA recombination protein2e-0756.6
NC_006270:1415001:143041114304111431232822Bacillus licheniformis ATCC 14580, complete genomeDNA binding, phage related protein2e-0653.1
NC_006322:1415863:143127414312741432095822Bacillus licheniformis ATCC 14580, complete genomeYqaK2e-0653.1
NC_008258:269806:282892282892283794903Shigella flexneri 5 str. 8401, complete genomeputative phage-related DNA recombination protein4e-0652.4
NC_009800:289000:298005298005298907903Escherichia coli HS, complete genomeRecT family protein4e-0652.4
NC_017328:303987:314833314833315735903Shigella flexneri 2002017 chromosome, complete genomeputative phage-related DNA recombination protein6e-0652