Pre_GI: BLASTP Hits

Some Help

Query: NC_021182:2536000:2537889 Clostridium pasteurianum BC1, complete genome

Start: 2537889, End: 2538323, Length: 435

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012658:1810640:181110518111051811530426Clostridium botulinum Ba4 str. 657 chromosome, complete genomeimmunity repressor protein9e-29125
NC_017190:3166000:317850431785043178935432Bacillus amyloliquefaciens LL3 chromosome, complete genomeSPBc2 prophage-derived HTH-type transcriptional regulator yonR2e-23107
NC_009674:2985878:301907730190773019499423Bacillus cytotoxicus NVH 391-98 chromosome, complete genomehelix-turn-helix domain-containing protein9e-22102
NC_003212:1248000:124920512492051249633429Listeria innocua Clip11262, complete genomehypothetical protein2e-1787.8
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein4e-1476.6
NC_016048:4047922:407797940779794078410432Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein7e-1475.9
NC_009513:1184000:119832711983271198764438Lactobacillus reuteri F275, complete genomehelix-turn-helix domain protein7e-1475.9
NC_013198:1095591:110846011084601108798339Lactobacillus rhamnosus GG, complete genomeprophage protein, DNA-binding protein7e-1475.9
NC_021184:3533500:353518535351853535601417Desulfotomaculum gibsoniae DSM 7213, complete genomeputative transcriptional regulator5e-1269.7
NC_015428:1483768:150354015035401503917378Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1269.3
NC_015573:2463123:248569424856942485930237Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein9e-1268.9
NC_013798:1778758:179057017905701790932363Streptococcus gallolyticus UCN34, complete genomeputative transcriptional regulator, Cro/CI family2e-1167.8
NC_010516:2328288:234697823469782347427450Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator7e-1165.9
NC_016894:3988180:400563340056334006028396Acetobacterium woodii DSM 1030 chromosome, complete genomeputative phage repressor8e-1165.9
NC_015601:627217:628845628845629261417Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeXRE family transcriptional regulator8e-1165.9
NC_015573:2040500:204189420418942042295402Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1065.5
NC_017179:1683199:168719916871991687747549Clostridium difficile BI1, complete genomephage regulatory protein1e-1065.1
NC_014964:2272413:229248922924892292878390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein2e-1064.7
NC_017179:1683199:168775916877591688100342Clostridium difficile BI1, complete genomephage repressor2e-1064.3
NC_015975:923812:941399941399941818420Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein3e-1063.9
NC_009012:2927793:293408629340862934514429Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family3e-1063.9
NC_015573:2463123:248983824898382490296459Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1063.5
NC_014538:2158131:218091821809182181331414Thermoanaerobacter sp. X513 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1063.5
NC_012563:2597934:260915726091572609615459Clostridium botulinum A2 str. Kyoto, complete genomeimmunity repressor protein5e-1063.2
NC_015913:117966:119554119554119772219Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeXRE family transcriptional regulator5e-1063.2
NC_009922:1917271:191727119172711917642372Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, XRE family6e-1062.8
NC_009332:1050353:106756510675651067915351Streptococcus pyogenes str. Manfredo chromosome, complete genomephage DNA-binding protein8e-1062.4
NC_011375:749693:751627751627751977351Streptococcus pyogenes NZ131 chromosome, complete genomerepressor-phage associated8e-1062.4
NC_012471:2080902:210324921032492103599351Streptococcus equi subsp. equi 4047, complete genomephage DNA-binding protein8e-1062.4
NC_015519:1081539:108566910856691086064396Tepidanaerobacter sp. Re1 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0962
NC_011837:3272752:329170232917023292304603Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0962
NC_009706:3341250:336020033602003360802603Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator1e-0962
NC_015558:905227:925182925182925535354Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative repressor - phage associated1e-0961.6
NC_000964:521975:530691530691531074384Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-0960.5
NC_010610:755000:763466763466763780315Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-0960.5
NC_009253:3017280:302629030262903026709420Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator3e-0960.5
NC_016641:2735054:274219227421922742404213Paenibacillus terrae HPL-003 chromosome, complete genomeXRE family transcriptional regulator4e-0960.1
NC_009617:1897887:190150219015021901873372Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0960.1
NC_015573:2463123:248662424866242486842219Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0858.9
NC_015930:18969:326753267533028354Lactococcus garvieae ATCC 49156, complete genomehypothetical protein1e-0858.9
NC_014206:3355156:337460433746043375011408Geobacillus sp. C56-T3 chromosome, complete genomeXRE family transcriptional regulator9e-0958.9
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein8e-0958.9
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator8e-0958.9
NC_016791:3891272:391212439121243912540417Clostridium sp. BNL1100 chromosome, complete genomeputative transcriptional regulator1e-0858.5
NC_000964:2049899:205548820554882055826339Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-0858.5
NC_012891:1100726:111421611142161114566351Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,putative phage DNA-binding protein1e-0858.5
NC_012781:1968827:199127319912731991599327Eubacterium rectale ATCC 33656, complete genomehypothetical protein1e-0858.5
NC_012891:1277966:129143912914391292212774Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein1e-0858.5
NC_013171:896802:898431898431899051621Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, XRE family1e-0858.5
NC_019896:1989997:200906620090662009404339Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetranscription regulator YobD1e-0858.2
NC_016641:2735054:274161127416112741856246Paenibacillus terrae HPL-003 chromosome, complete genomeXRE family transcriptional regulator1e-0858.2
NC_014479:509919:530075530075530860786Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehelix-turn-helix domain-containing protein2e-0858.2
NC_009633:2592000:263151726315172631879363Alkaliphilus metalliredigens QYMF chromosome, complete genomehelix-turn-helix domain-containing protein2e-0857.8
NC_016052:842762:846086846086846415330Tetragenococcus halophilus NBRC 12172, complete genomeputative Xre family DNA-binding protein2e-0857.8
NC_009513:870837:873129873129873464336Lactobacillus reuteri F275, complete genometranscriptional regulator, XRE family3e-0857.4
NC_013411:3314799:335015933501593350566408Geobacillus sp. Y412MC61, complete genometranscriptional regulator, XRE family4e-0857
NC_014915:3320768:335612833561283356535408Geobacillus sp. Y412MC52 chromosome, complete genomehelix-turn-helix domain protein4e-0857
NC_017167:2298962:237640023764002376648249Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1XRE family transcriptional regulator4e-0857
NC_012034:2555447:257988525798852580199315Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, XRE family4e-0857
NC_020210:3246839:326198032619803262387408Geobacillus sp. GHH01, complete genometranscriptional regulator5e-0856.6
NC_014657:2127500:214037221403722140905534Caldicellulosiruptor owensensis OL chromosome, complete genomehelix-turn-helix domain protein4e-0856.6
NC_014554:2159782:217852921785292179032504Lactobacillus plantarum subsp. plantarum ST-III chromosome,immunity repressor protein (phage-related protein)8e-0855.8
NC_003919:1716831:172547517254751725804330Xanthomonas axonopodis pv. citri str. 306, complete genometranscriptional regulator1e-0755.5
NC_011830:720756:738182738182738397216Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, XRE family1e-0755.5
NC_007907:808893:840301840301840516216Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0755.5
NC_004070:747146:751867751867752256390Streptococcus pyogenes MGAS315, complete genomeputative repressor - phage associated1e-0755.5
NC_016048:2907702:292277429227742922983210Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein1e-0755.5
NC_017208:1831918:183596118359611836299339Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional regulator1e-0755.5
NC_003485:296140:296536296536296886351Streptococcus pyogenes MGAS8232, complete genomeputative repressor protein9e-0855.5
NC_004606:1107500:114453911445391144889351Streptococcus pyogenes SSI-1, complete genomeputative repressor protein9e-0855.5
NC_017294:115500:118873118873119088216Candidatus Arthromitus sp. SFB-mouse-Yit, complete genometranscriptional regulator1e-0755.1
NC_017195:2027430:204155520415552041794240Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein1e-0755.1
NC_017199:31500:355233552335900378Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28,putative transcriptional regulator1e-0755.1
NC_014551:865254:871752871752872057306Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein2e-0754.7
NC_017068:1327025:133638713363871336686300Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-0754.7
NC_015573:776209:776910776910777461552Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0754.3
NC_008024:548165:548165548165548914750Streptococcus pyogenes MGAS10750, complete genomephage transcriptional repressor2e-0754.3
NC_008021:531730:531730531730532479750Streptococcus pyogenes MGAS9429, complete genomephage transcriptional repressor2e-0754.3
NC_016048:751000:769269769269769643375Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein2e-0754.3
NC_017025:1651870:166594816659481666286339Flavobacterium indicum GPTSA100-9, complete genometranscriptional regulator, XRE family2e-0754.3
NC_015144:900000:908808908808909149342Weeksella virosa DSM 16922 chromosome, complete genomehelix-turn-helix domain protein3e-0753.9
NC_013205:1123280:113410711341071134355249Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family3e-0753.9
NC_004070:1431146:144786114478611448235375Streptococcus pyogenes MGAS315, complete genomeputative repressor - phage associated3e-0753.9
NC_013205:526281:535213535213535704492Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family3e-0753.9
NC_004606:446427:448650448650449024375Streptococcus pyogenes SSI-1, complete genomeputative repressor protein3e-0753.9
NC_006086:35599:378223782238172351Streptococcus pyogenes MGAS10394, complete genomePhage transcriptional regulator, Cro/CI family3e-0753.9
NC_014831:8965:177711777118166396Thermaerobacter marianensis DSM 12885 chromosome, complete genomehelix-turn-helix domain protein4e-0753.5
NC_002570:367000:370443370443370793351Bacillus halodurans C-125, complete genometranscriptional regulator (phage-related)4e-0753.5
NC_004722:1804788:180478818047881805132345Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, MerR family4e-0753.5
NC_013766:679906:683546683546683872327Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator5e-0753.1
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0753.1
NC_009012:1857845:1863582186358218647061125Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family5e-0753.1
NC_006322:1415863:142614914261491426517369Bacillus licheniformis ATCC 14580, complete genomeYqaE5e-0753.1
NC_006270:1415001:142528614252861425654369Bacillus licheniformis ATCC 14580, complete genomeprobable transcriptional regulator (phage-related)5e-0753.1
NC_015875:190041:192949192949193464516Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeXRE family transcriptional regulator5e-0753.1
NC_004722:1804788:180713218071321807470339Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator4e-0753.1
NC_013235:464049:465497465497466090594Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, XRE family7e-0752.8
NC_007644:280000:289097289097289333237Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family7e-0752.8
NC_020272:2748733:279546227954622795836375Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein9e-0752.4
NC_019842:1172944:117596611759661176340375Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein9e-0752.4
NC_008380:2287327:230295523029552303281327Rhizobium leguminosarum bv. viciae 3841, complete genomeputative helix-turn-helix transcriptional regulatory protein8e-0752.4
NC_020995:3300751:330563933056393305863225Enterococcus casseliflavus EC20, complete genomehypothetical protein8e-0752.4
NC_020995:3300751:330534333053433305561219Enterococcus casseliflavus EC20, complete genomehypothetical protein8e-0752.4
NC_013132:5942981:596067259606725961016345Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family8e-0752.4
NC_009332:653474:656458656458656808351Streptococcus pyogenes str. Manfredo chromosome, complete genomeDNA-binding phage protein8e-0752.4
NC_013766:1293144:129361312936131293936324Listeria monocytogenes 08-5578 chromosome, complete genomeputative repressor protein8e-0752.4
NC_013768:1260317:126031712603171260640324Listeria monocytogenes 08-5923, complete genomeputative repressor protein8e-0752.4
NC_015690:7422911:743071274307127430906195Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXRE family transcriptional regulator1e-0652
NC_016935:7512884:752068375206837520877195Paenibacillus mucilaginosus 3016 chromosome, complete genomeXRE family transcriptional regulator1e-0652
NC_008022:771767:776825776825777139315Streptococcus pyogenes MGAS10270, complete genomeTranscriptional regulator, Cro/CI family1e-0652
NC_003212:57061:785057850578981477Listeria innocua Clip11262, complete genomehypothetical protein1e-0652
NC_008024:804157:808092808092808406315Streptococcus pyogenes MGAS10750, complete genomeTranscriptional regulator, Cro/CI family1e-0652
NC_013132:5942981:595278159527815953122342Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family1e-0652
NC_014136:329484:330462330462330773312Leuconostoc kimchii IMSNU11154 chromosome, complete genometranscription regulator1e-0652
NC_011660:2924397:292631729263172926793477Listeria monocytogenes HCC23 chromosome, complete genomegp331e-0651.6
NC_015634:2492771:249595924959592496378420Bacillus coagulans 2-6 chromosome, complete genomeXRE family transcriptional regulator2e-0651.2
NC_009706:2003194:202021320202132020998786Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein2e-0651.2
NC_011837:1935294:195171619517161952501786Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0651.2
NC_016048:1930089:194775419477541948359606Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein2e-0651.2
NC_014650:603500:617995617995618441447Geobacillus sp. Y4.1MC1 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0651.2
NC_018870:757416:801826801826802275450Thermacetogenium phaeum DSM 12270 chromosome, complete genomehypothetical protein2e-0651.2
NC_009442:867625:874740874740874961222Streptococcus suis 05ZYH33 chromosome, complete genomeCro/CI family transcriptional regulator2e-0651.2
NC_013921:1915377:192814219281421928690549Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, XRE family2e-0651.2
NC_013205:526281:536672536672536920249Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family2e-0651.2
NC_009706:1972000:199149419914941992135642Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-0650.8
NC_017188:2221705:224299122429912243377387Bacillus amyloliquefaciens TA208 chromosome, complete genomeDNA-binding protein2e-0650.8
NC_009253:529494:536731536731537033303Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator2e-0650.8
NC_012791:2590500:260157026015702602160591Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family2e-0650.8
NC_009706:1935418:195186219518621952668807Clostridium kluyveri DSM 555 chromosome, complete genomephage transcriptional regulator3e-0650.4
NC_009328:293000:362637362637363419783Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein3e-0650.4
NC_017243:58000:701837018370998816Brachyspira intermedia PWS/A chromosome, complete genomephage repressor4e-0650.1
NC_012471:781063:786052786052786402351Streptococcus equi subsp. equi 4047, complete genomephage repressor4e-0650.1
NC_007644:280000:287262287262287648387Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family4e-0650.1
NC_013316:2033906:207919720791972080003807Clostridium difficile R20291, complete genomehypothetical protein4e-0650.1
NC_014483:1179286:118168111816811182154474Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator6e-0649.7
NC_004606:877707:885071885071885385315Streptococcus pyogenes SSI-1, complete genomehypothetical protein6e-0649.7
NC_011660:2541632:257988525798852580220336Listeria monocytogenes HCC23 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0649.7
NC_009253:3017280:302680730268073027181375Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator5e-0649.7
NC_015385:2050648:206670720667072067507801Treponema succinifaciens DSM 2489 chromosome, complete genomehelix-turn-helix domain protein6e-0649.3
NC_013316:2033906:206067020606702061518849Clostridium difficile R20291, complete genometranscription regulator (yobd protein)7e-0649.3
NC_020134:420500:424294424294424635342Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative transcriptional regulator8e-0649.3
NC_015558:1485762:148904014890401489570531Streptococcus parauberis KCTC 11537 chromosome, complete genomeDNA-binding phage protein8e-0649.3
NC_002737:780857:780857780857781603747Streptococcus pyogenes M1 GAS, complete genomeputative repressor protein - phage associated8e-0649.3
NC_021175:2063611:207187220718722072216345Streptococcus oligofermentans AS 1.3089, complete genomeCro/CI family transcriptional regulator1e-0548.9