Pre_GI: BLASTP Hits

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Query: NC_021182:2360500:2367269 Clostridium pasteurianum BC1, complete genome

Start: 2367269, End: 2371261, Length: 3993

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:1202261:1227866122786612316933828Clostridium difficile 630, complete genomeATP-dependent nuclease subunit A01106
NC_013316:1081044:1106579110657911104063828Clostridium difficile R20291, complete genomeATP-dependent nuclease subunit A01103
NC_020291:1:2221022210259413732Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeATP-dependent helicase/nuclease subunit A01015
NC_011969:1181302:1191830119183011955553726Bacillus cereus Q1 chromosome, complete genomeATP-dependent nuclease, subunit a0873
NC_003909:1244000:1254852125485212585773726Bacillus cereus ATCC 10987, complete genomeATP-dependent nuclease, subunit A0872
NC_017208:1147230:1159040115904011627653726Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeATP-dependent nuclease subunit A0868
NC_014335:1094000:1105302110530211090273726Bacillus cereus biovar anthracis str. CI chromosome, completeATP-dependent nuclease subunit A0866
NC_010184:1114000:1121749112174911254743726Bacillus weihenstephanensis KBAB4, complete genomeRecombination helicase AddA0865
NC_011725:1150779:1162548116254811662733726Bacillus cereus B4264 chromosome, complete genomeATP-dependent nuclease subunit A0865
NC_004722:1108649:1120491112049111242163726Bacillus cereus ATCC 14579, complete genomeATP-dependent nuclease subunit A0865
NC_014171:1118000:1128345112834511320703726Bacillus thuringiensis BMB171 chromosome, complete genomeATP-dependent nuclease subunit A0865
NC_005945:1103729:1115543111554311192683726Bacillus anthracis str. Sterne, complete genomeATP-dependent nuclease, subunit A0865
NC_012659:1103737:1115551111555111192763726Bacillus anthracis str. A0248, complete genomeATP-dependent nuclease, subunit A0865
NC_011772:1094534:1106450110645011101753726Bacillus cereus G9842, complete genomeATP-dependent nuclease, subunit A0865
NC_014622:3819495:3827329382732938313484020Paenibacillus polymyxa SC2 chromosome, complete genomerecombination helicase adda0805
NC_014483:3498395:3506660350666035106794020Paenibacillus polymyxa E681 chromosome, complete genomeATP-dependent nuclease subunit A0801
NC_016641:5528826:5539691553969155437884098Paenibacillus terrae HPL-003 chromosome, complete genomeATP-dependent nuclease subunit A0785
NC_015425:369225:3726203726203763543735Clostridium botulinum BKT015925 chromosome, complete genomeATP-dependent nuclease subunit A0705
NC_007907:1940000:1958144195814419623224179Desulfitobacterium hafniense Y51, complete genomehypothetical protein0701
NC_011830:3025437:3043677304367730478554179Desulfitobacterium hafniense DCB-2, complete genomerecombination helicase AddA0700
NC_016627:3972751:3975148397514839789123765Clostridium clariflavum DSM 19732 chromosome, complete genomerecombination helicase AddA0654
NC_016012:16134:1613416134197183585Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeATP-dependent deoxyribonuclease chain A8e-162572
NC_021184:3793285:3798282379828238022203939Desulfotomaculum gibsoniae DSM 7213, complete genomeATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing8e-142505
NC_007644:469181:4920174920174962344218Moorella thermoacetica ATCC 39073, complete genomeUvrD/REP helicase4e-138493
NC_015978:1266196:1262475126247512662033729Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeATP-dependent helicase/nuclease subunit A3e-136486
NC_015428:2291430:2308080230808023118383759Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeATP-dependent helicase/nuclease subunit A1e-133478
NC_016047:1234743:1254214125421412579183705Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completerecombination helicase AddA1e-130468
NC_014614:260782:2675712675712711253555Clostridium sticklandii, complete genomeATP-dependent nuclease, subunit A4e-110400
NC_009785:1443500:1456866145686614605163651Streptococcus gordonii str. Challis substr. CH1, complete genomefirst chain of major exonuclease RexA5e-96353
NC_013520:1905554:1912628191262819164943867Veillonella parvula DSM 2008, complete genomerecombination helicase AddA9e-92339
NC_015067:1528984:1554473155447315585884116Bifidobacterium longum subsp. longum JCM 1217, complete genomeATP-dependent nuclease subunit A1e-43179
NC_007604:1183497:1186081118608111892663186Synechococcus elongatus PCC 7942, complete genomehypothetical protein3e-27125
NC_006576:414696:4315394315394347243186Synechococcus elongatus PCC 6301, complete genomehypothetical protein5e-27124
NC_020388:1479568:1527842152784215316603819Natronomonas moolapensis 8.8.11 complete genomeUvrD/REP family helicase7e-27124
NC_009051:1455183:1496202149620214994443243Methanoculleus marisnigri JR1, complete genomeUvrD/REP helicase2e-1999.4
NC_010545:619346:6399726399726430403069Corynebacterium urealyticum DSM 7109, complete genomeputative ATP-dependent DNA helicase II3e-1792
NC_018581:2768743:2778553277855327818073255Gordonia sp. KTR9 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)5e-1687.8
NC_015740:3678342:3678342367834236820223681Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit beta2e-1586.3
NC_015519:2045935:2048474204847420513862913Tepidanaerobacter sp. Re1 chromosome, complete genomeUvrD/REP helicase5e-1584.7
NC_010368:191920:2037122037122073473636Halobacterium salinarum R1 plasmid PHS3, complete sequenceputative helicase8e-1584
NC_020453:7826358:7826358782635878296753318Agromonas oligotrophica S58 DNA, complete genomeUvrD/REP helicase1e-1380.1
NC_015732:30472:6948969489730223534Spirochaeta caldaria DSM 7334 chromosome, complete genomeUvrD/REP helicase2e-1379
NC_011206:2512667:2516056251605625196523597Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, beta subunit3e-1378.6
NC_014365:2037506:2061168206116820646473480Desulfarculus baarsii DSM 2075 chromosome, complete genomeUvrD/REP helicase6e-1377.4
NC_014762:1715190:1715190171519017184983309Sulfuricurvum kujiense DSM 16994 chromosome, complete genomeuvrd/rep helicase8e-1377
NC_014926:795549:7955497955497984252877Thermovibrio ammonificans HB-1 chromosome, complete genomeUvrD/REP helicase1e-1276.6
NC_021171:2562000:2569926256992625731923267Bacillus sp. 1NLA3E, complete genomeUvrD/REP helicase7e-1273.9
NC_009720:870194:8701948701948735173324Xanthobacter autotrophicus Py2, complete genomeUvrD/REP helicase1e-1173.2
NC_015660:3518931:3562042356204235642342193Geobacillus thermoglucosidasius C56-YS93 chromosome, completeATP-dependent DNA helicase PcrA1e-1173.2
NC_018012:3102215:3126846312684631290172172Thiocystis violascens DSM 198 chromosome, complete genomeDNA/RNA helicase6e-1170.9
NC_021171:358456:3625633625633647762214Bacillus sp. 1NLA3E, complete genomeATP-dependent DNA helicase2e-1068.9
NC_009012:3354477:3399024339902434012492226Clostridium thermocellum ATCC 27405, complete genomeATP-dependent DNA helicase PcrA3e-1068.6
NC_012811:317308:3394763394763414762001Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative ATP-dependent DNA helicase4e-1068.2
NC_014614:656000:6578816578816600432163Clostridium sticklandii, complete genomeATP-dependent DNA helicase4e-1068.2
NC_009465:90000:9221992219953893171Candidatus Vesicomyosocius okutanii HA, complete genomeATP-dependent DNA helicase8e-1067.4
NC_018515:3169973:3177608317760831798482241Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeATP-dependent DNA helicase PcrA9e-1067
NC_020210:2133996:2174276217427621763362061Geobacillus sp. GHH01, complete genomeDNA/RNA helicase1e-0967
NC_014924:3334386:3354099335409933577163618Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, beta subunit1e-0966.6
NC_012704:1747539:1752639175263917563193681Corynebacterium kroppenstedtii DSM 44385, complete genomeputative ATP-dependent DNA helicase II1e-0966.6
NC_006322:717953:7179537179537201722220Bacillus licheniformis ATCC 14580, complete genomePcrA2e-0966.2
NC_006270:718169:7181697181697203882220Bacillus licheniformis ATCC 14580, complete genomeATP-dependent DNA helicase2e-0966.2
NC_014315:2239725:2236289223628922397323444Nitrosococcus watsoni C-113 chromosome, complete genomeUvrD/REP helicase2e-0966.2
NC_019814:320260:3202603202603236193360Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein2e-0966.2
NC_011832:619874:6202246202246232833060Candidatus Methanosphaerula palustris E1-9c, complete genomeUvrD/REP helicase1e-0966.2
NC_015859:1069116:1089451108945110925733123Corynebacterium variabile DSM 44702 chromosome, complete genomeATP-dependent DNA helicase II2e-0965.9
NC_018720:1186058:1186058118605811885712514Bifidobacterium asteroides PRL2011 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-0965.9
NC_015578:2428500:2432809243280924359673159Treponema primitia ZAS-2 chromosome, complete genomeputative UvrD/REP helicase2e-0965.9
NC_017190:2130651:2212720221272022145161797Bacillus amyloliquefaciens LL3 chromosome, complete genomeUvrD/REP helicase2e-0965.5
NC_020209:3797830:3794159379415937978333675Pseudomonas poae RE*1-1-14, complete genomeexodeoxyribonuclease V subunit beta4e-0964.7
NC_014408:806720:8331098331098358652757Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent DNA helicase4e-0964.7
NC_020299:149118:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein6e-0964.3
NC_020299:127480:1491181491181524593342Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeUvrD/Rep helicase family protein6e-0964.3
NC_015064:1984662:1989249198924919927463498Acidobacterium sp. MP5ACTX9 chromosome, complete genomeUvrD/REP helicase8e-0963.9
NC_014033:1152994:1154615115461511570442430Prevotella ruminicola 23 chromosome, complete genomeputative ATP-dependent DNA helicase PcrA2e-0863.2
NC_010102:997417:1014640101464010180233384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0862.8
NC_019815:761480:7794157794157827743360Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiUvrD/Rep helicase family protein 22e-0862.8
NC_016776:2956444:2997159299715929995192361Bacteroides fragilis 638R, complete genomeputative helicase2e-0862.8
NC_006347:2899653:2906221290622129085812361Bacteroides fragilis YCH46, complete genomeATP-dependent DNA helicase2e-0862.8
NC_003228:2973266:2979834297983429821942361Bacteroides fragilis NCTC 9343, complete genomeputative helicase2e-0862.8
NC_013889:1740858:1737139173713917408613723Thioalkalivibrio sp. K90mix chromosome, complete genomeexodeoxyribonuclease V, beta subunit3e-0862
NC_019978:2293327:2307011230701123091222112Halobacteroides halobius DSM 5150, complete genomeATP-dependent DNA helicase PcrA3e-0862
NC_014774:293800:2902742902742938133540Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completedouble-strand break repair helicase AddA3e-0862
NC_015573:1671000:1688552168855216907562205Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeATP-dependent DNA helicase PcrA5e-0861.2
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA5e-0861.2
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase5e-0861.2
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II5e-0861.2
NC_010803:1436397:1454628145462814583083681Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, beta subunit9e-0860.5
NC_010513:44886:4643546435486062172Xylella fastidiosa M12 chromosome, complete genomeDNA-dependent helicase II1e-0760.5
NC_015388:269301:2693012693012727143414Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeUvrD/REP helicase1e-0760.1
NC_014829:443500:4665374665374688192283Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeATP-dependent DNA helicase PcrA1e-0760.1
NC_019896:2805098:2819463281946328217422280Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein1e-0759.7
NC_004603:1115134:1135576113557611389953420Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative ATP-dependent DNA helicase1e-0759.7
NC_014720:4170:2938329383316532271Caldicellulosiruptor kronotskyensis 2002 chromosome, completeuvrd/rep helicase2e-0759.3
NC_014837:1144500:1151150115115011545423393Pantoea sp. At-9b chromosome, complete genomeUvrD/REP helicase2e-0758.9
NC_015161:927152:9336859336859359882304Deinococcus proteolyticus MRP chromosome, complete genomeUvrD/REP helicase3e-0758.5
NC_017047:2042346:2042926204292620463183393Rahnella aquatilis HX2 chromosome, complete genomeUvrD/REP helicase3e-0758.5
NC_013410:2179342:2189179218917921924633285Fibrobacter succinogenes subsp. succinogenes S85 chromosome,UvrD/REP helicase3e-0758.5
NC_012982:711122:7184207184207218243405Hirschia baltica ATCC 49814, complete genomeUvrD/REP helicase4e-0758.2
NC_009615:1067603:1087220108722010895622343Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase4e-0758.2
NC_008639:1573971:1592170159217015958353666Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, beta subunit4e-0758.2
NC_017188:1172181:1243369124336912451651797Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-dependent DNA helicase, uvrD-like protein6e-0757.8
NC_017191:1173989:1244946124494612467421797Bacillus amyloliquefaciens XH7 chromosome, complete genomeUvrD/REP helicase6e-0757.8
NC_014218:1437931:1439939143993914424492511Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeUvrD/REP helicase5e-0757.8
NC_002488:45219:4680546805489912187Xylella fastidiosa 9a5c, complete genomeDNA helicase II7e-0757.4
NC_009952:3596399:3620154362015436235313378Dinoroseobacter shibae DFL 12, complete genomedouble-strand break repair helicase AddA7e-0757.4
NC_004061:498483:4984834984835020223540Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 135 kDa polypeptide1e-0657
NC_003063:304962:3068053068053089252121Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein1e-0657
NC_013406:6494079:6494079649407964964092331Paenibacillus sp. Y412MC10 chromosome, complete genomeATP-dependent DNA helicase PcrA1e-0657
NC_009975:1712577:1739721173972117425612841Methanococcus maripaludis C6, complete genomeUvrD/REP helicase1e-0657
NC_003305:1743939:1765832176583217678982067Agrobacterium tumefaciens str. C58 chromosome linear, completeATP-dependent DNA helicase1e-0657
NC_014550:615609:6289646289646313422379Arthrobacter arilaitensis Re117, complete genomeATP-dependent DNA helicase PcrA1e-0656.6
NC_015676:109743:1250711250711278602790Methanosalsum zhilinae DSM 4017 chromosome, complete genomeUvrD/REP helicase2e-0656.2
NC_007519:3527207:3527207352720735293662160Desulfovibrio alaskensis G20 chromosome, complete genomeATP-dependent DNA helicase UvrD2e-0656.2
NC_018645:4945698:4953396495339649571633768Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit beta2e-0656.2
NC_009441:4449500:4470831447083144731942364Flavobacterium johnsoniae UW101 chromosome, complete genomeUvrD/REP helicase2e-0655.8
NC_010718:3039434:3039434303943430416982265Natranaerobius thermophilus JW/NM-WN-LF, complete genomeUvrD/REP helicase2e-0655.8
NC_013525:1953920:1968327196832719706662340Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeUvrD/REP helicase3e-0655.5
NC_017904:2162045:2177783217778321805482766Mycobacterium sp. MOTT36Y chromosome, complete genomeDNA/RNA helicase3e-0655.5
NC_015977:2807782:2831058283105828339462889Roseburia hominis A2-183 chromosome, complete genomeSuperfamily I helicase domain and RecB family exonuclease domain containing protein3e-0655.5
NC_014098:2225174:2258626225862622608482223Bacillus tusciae DSM 2912 chromosome, complete genomeUvrD/REP helicase5e-0654.7
NC_014376:1842290:1845537184553718478252289Clostridium saccharolyticum WM1 chromosome, complete genomeUvrD/REP helicase5e-0654.7
NC_016779:312500:3133533133533156142262Bacillus cereus F837/76 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA6e-0654.3
NC_017200:345502:3455023455023477512250Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ATP-dependent DNA helicase PcrA6e-0654.3
NC_016599:3434996:3434996343499634373742379Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeDNA/RNA helicase8e-0653.9