Pre_GI: BLASTP Hits

Some Help

Query: NC_021182:2059143:2060229 Clostridium pasteurianum BC1, complete genome

Start: 2060229, End: 2061137, Length: 909

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:1494796:150929615092961510189894Escherichia fergusonii ATCC 35469, complete genomehypothetical protein3e-69261
NC_010498:1700447:171813617181361719029894Escherichia coli SMS-3-5, complete genomePhzF family phenazine biosynthesis protein6e-69261
NC_011750:1809943:180994318099431810836894Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-69261
NC_000913:1517051:153298915329891533882894Escherichia coli K12, complete genomehypothetical protein5e-69261
AC_000091:1521976:153667915366791537572894Escherichia coli W3110 DNA, complete genomehypothetical protein5e-69261
NC_010473:1607646:162358416235841624477894Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein5e-69261
NC_012759:1409086:142504814250481425941894Escherichia coli BW2952 chromosome, complete genomehypothetical protein5e-69261
NC_007946:1586656:160367816036781604571894Escherichia coli UTI89, complete genomehypothetical protein YddE4e-69261
NC_008563:1577879:159259615925961593489894Escherichia coli APEC O1, complete genomeconserved hypothetical protein YddE4e-69261
NC_011742:1528668:154568915456891546582894Escherichia coli S88 chromosome, complete genomehypothetical protein4e-69261
NC_004431:1713141:172973217297321730625894Escherichia coli CFT073, complete genomeHypothetical protein yddE7e-69260
NC_007384:1737885:175974617597461760639894Shigella sonnei Ss046, complete genomehypothetical protein5e-68258
NC_016822:1818897:183773218377321838625894Shigella sonnei 53G, complete genomehypothetical protein5e-68258
NC_011745:1581907:159687915968791597772894Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-68258
NC_010468:2406387:240783824078382408731894Escherichia coli ATCC 8739, complete genomephenazine biosynthesis protein PhzF family7e-68257
NC_007606:1515403:151685515168551517748894Shigella dysenteriae Sd197, complete genomehypothetical protein1e-67256
NC_011751:1714131:173057917305791731472894Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-67256
NC_002655:2015000:203337920333792034272894Escherichia coli O157:H7 EDL933, complete genomehypothetical protein4e-67254
NC_013941:1857724:185866518586651859558894Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-67254
NC_006526:1976779:200075920007592001646888Zymomonas mobilis subsp. mobilis ZM4, complete genomepredicted epimerase9e-40164
NC_015690:2039215:204396620439662044874909Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein9e-39160
NC_016935:2567039:259268325926832593528846Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein4e-38158
NC_009848:3631243:363366736336673634563897Bacillus pumilus SAFR-032, complete genomephenazine biosynthesis protein4e-37155
NC_008686:1383891:141630214163021417177876Paracoccus denitrificans PD1222 chromosome 1, complete sequencephenazine biosynthesis protein PhzF family9e-37154
NC_014221:1518583:153273615327361533635900Truepera radiovictrix DSM 17093 chromosome, complete genomephenazine biosynthesis protein PhzF family5e-32138
NC_009718:518873:519799519799520677879Fervidobacterium nodosum Rt17-B1, complete genomePhzF family phenazine biosynthesis protein2e-29129
NC_017095:269165:275882275882276760879Fervidobacterium pennivorans DSM 9078 chromosome, complete genomephenazine biosynthesis protein PhzF family protein9e-28124
NC_010087:319063:329790329790330668879Burkholderia multivorans ATCC 17616 chromosome 3, completephenazine biosynthesis protein PhzF family4e-26118
NC_010801:550270:594190594190595068879Burkholderia multivorans ATCC 17616 chromosome 3, completepredicted epimerase4e-26118
NC_007511:1780500:178082417808241781729906Burkholderia sp. 383 chromosome 2, complete sequencePhenazine biosynthesis PhzC/PhzF protein5e-25115
NC_015275:3761889:377841137784113779289879Clostridium lentocellum DSM 5427 chromosome, complete genomephenazine biosynthesis protein PhzF family3e-24112
NC_013665:2132000:214887721488772149755879Methanocella paludicola SANAE, complete genomeputative phenazine biosynthesis protein2e-23109
NC_010505:1205747:120810412081041208988885Methylobacterium radiotolerans JCM 2831, complete genomephenazine biosynthesis protein PhzF family4e-23108
NC_003454:2080705:209594220959422096823882Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completePhenazine biosynthesis protein phzF6e-23108
NC_016631:3245501:324794832479483248838891Granulicella mallensis MP5ACTX8 chromosome, complete genomephenazine biosynthesis protein PhzF family9e-21100
NC_014632:1248611:127325512732551274103849Ilyobacter polytropus DSM 2926 chromosome, complete genomephenazine biosynthesis protein PhzF family5e-2098.6
NC_007802:1093785:109904310990431099909867Jannaschia sp. CCS1, complete genomePhenazine biosynthesis PhzC/PhzF protein8e-2097.8
NC_016027:2580477:259893525989352599777843Gluconacetobacter xylinus NBRC 3288, complete genomephenazine biosynthesis PhzC/PhzF protein1e-1997.1
NC_012214:124337:141039141039141890852Erwinia pyrifoliae Ep1/96, complete genomeantibiotic biosynthesis protein2e-1996.3
NC_013947:4602959:461273346127334613575843Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephenazine biosynthesis protein PhzF family2e-1996.3
NC_015564:1199330:119933011993301200115786Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomePhenazine biosynthesis protein PhzF family1e-1894
NC_010512:110932:116198116198117070873Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencephenazine biosynthesis protein PhzF family3e-1892.8
NC_009953:3552738:355273835527383553583846Salinispora arenicola CNS-205 chromosome, complete genomePhzF family phenazine biosynthesis protein5e-1892
NC_016111:1484424:148575814857581486633876Streptomyces cattleya NRRL 8057, complete genomeoxidoreductase5e-1892
NC_005085:2869159:287733528773352878168834Chromobacterium violaceum ATCC 12472, complete genomeprobable phenazine biosynthesis protein6e-1891.7
NC_009925:4044691:406802240680224068858837Acaryochloris marina MBIC11017, complete genomephenazine biosynthesis PhzF family protein2e-1789.7
NC_014391:3103000:312599931259993126856858Micromonospora aurantiaca ATCC 27029 chromosome, complete genomephenazine biosynthesis protein PhzF family4e-1789
NC_008463:4133700:415479341547934155629837Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative phenazine biosynthesis protein2e-1686.7
NC_014210:965130:969925969925970716792Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,phenazine biosynthesis protein PhzF family5e-1685.5
NC_009380:1177316:118172011817201182556837Salinispora tropica CNB-440 chromosome, complete genomePhzF family phenazine biosynthesis protein4e-1685.5
CP002207:1:338903389034666777Bacillus atrophaeus 1942, complete genomePhzF family phenazine biosynthesis protein4e-1685.5
NC_014639:1:338903389034666777Bacillus atrophaeus 1942 chromosome, complete genomePhzF family phenazine biosynthesis protein4e-1685.5
NC_002516:1474000:148021514802151481051837Pseudomonas aeruginosa PAO1, complete genomehypothetical protein5e-1685.1
NC_008570:3777469:379700037970003797803804Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomephenazine biosynthesis protein PhzF family7e-1684.7
NC_013929:4927380:494100849410084941964957Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1584
NC_014394:1626699:164354316435431644322780Gallionella capsiferriformans ES-2 chromosome, complete genomephenazine biosynthesis protein PhzF family4e-1582.4
UCMB5137:1:257102571026486777Bacillus atrophaeus UCMB-5137PhzF family phenazine biosynthesis protein4e-1582.4
NC_018664:3073022:308618430861843087071888Clostridium acidurici 9a chromosome, complete genomePhzF family phenazine biosynthesis protein1e-1480.5
NC_014965:1428902:152169115216911522575885Vibrio vulnificus MO6-24/O chromosome I, complete sequencephenazine biosynthesis protein PhzF like protein7e-1478.2
NC_019673:895418:897363897363898205843Saccharothrix espanaensis DSM 44229 complete genomePhenazine biosynthesis protein, PhzF family1e-1377.8
NC_014817:332000:352598352598353434837Asticcacaulis excentricus CB 48 chromosome 2, complete sequencephenazine biosynthesis protein phzf family8e-1374.7
NC_018679:2541986:255869325586932559484792Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completephenazine biosynthesis protein, PhzF family1e-1274.3
NC_009778:1717458:174960417496041750401798Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1273.2
NC_009665:2602000:260364726036472604447801Shewanella baltica OS185 chromosome, complete genomephenazine biosynthesis PhzC/PhzF protein3e-1169.3
NC_002506:370629:370629370629371468840Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein5e-1168.9
NC_016945:370471:370471370471371286816Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein5e-1168.6
NC_014618:2423661:242453824245382425326789Enterobacter cloacae SCF1 chromosome, complete genomephenazine biosynthesis protein PhzF family protein2e-1066.6
NC_011740:1831845:184737418473741848201828Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative epimerase, PhzC/PhzF homolog6e-0961.6