Pre_GI: BLASTP Hits

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Query: NC_021182:1188000:1198616 Clostridium pasteurianum BC1, complete genome

Start: 1198616, End: 1199044, Length: 429

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010516:359310:362087362087362518432Clostridium botulinum B1 str. Okra, complete genomerrf2 family protein5e-49192
NC_019842:484933:507481507481507924444Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-38157
NC_009725:496443:512050512050512493444Bacillus amyloliquefaciens FZB42, complete genomeYwnA14e-38156
NC_020410:495184:510885510885511328444Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative HTH-type transcriptional regulator ywnA1e-37154
NC_006322:3198829:321768432176843218118435Bacillus licheniformis ATCC 14580, complete genomehypothetical protein8e-37152
NC_006582:3949832:395054039505403950968429Bacillus clausii KSM-K16, complete genomehypothetical protein6e-35145
NC_015737:1976000:200201820020182002458441Clostridium sp. SY8519, complete genomehypothetical protein1e-27121
NC_012925:191501:192611192611193030420Streptococcus suis P1/7, complete genometranscriptional regulator protein2e-22104
NC_003212:456214:478256478256478723468Listeria innocua Clip11262, complete genomehypothetical protein5e-2096.3
NC_015172:1255956:125705012570501257517468Syntrophobotulus glycolicus DSM 8271 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family8e-1992.4
NC_012912:1053618:108756610875661088012447Dickeya zeae Ech1591, complete genometranscriptional regulator, BadM/Rrf2 family1e-1892
NC_016582:11878078:119013021190130211901736435Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-1891.3
NC_015578:3561838:357197935719793572464486Treponema primitia ZAS-2 chromosome, complete genomeRRF2 family protein5e-1889.7
NC_014323:3976351:401382540138254014268444Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein9e-1475.5
NC_012984:3077004:309908130990813099506426Lactobacillus plantarum JDM1, complete genometranscription regulator (putative)3e-1373.9
NC_009952:2752500:275702127570212757491471Dinoroseobacter shibae DFL 12, complete genometranscriptional regulator8e-1268.9
NC_006510:1014500:103480610348061035216411Geobacillus kaustophilus HTA426, complete genomehypothetical protein8e-1165.9
NC_007645:2294553:233269523326952333102408Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator2e-1064.3
NC_017297:2635892:265303626530362653221186Clostridium botulinum F str. 230613 chromosome, complete genomerrf2 family protein3e-1063.9
NC_012563:2761570:277871727787172778902186Clostridium botulinum A2 str. Kyoto, complete genome2e-0960.8
NC_020210:901240:927891927891928301411Geobacillus sp. GHH01, complete genometranscriptional regulator BadM/Rrf2 family3e-0960.5
NC_003305:693810:712189712189712611423Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein6e-0959.7
NC_003063:1358738:136208513620851362567483Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein6e-0959.7
NC_014659:4908182:491434449143444914727384Rhodococcus equi 103S, complete genometranscriptional regulator1e-0858.9
NC_008686:1383891:139007213900721390542471Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, BadM/Rrf2 family9e-0958.9
NC_008687:302450:303258303258303755498Paracoccus denitrificans PD1222 chromosome 2, complete sequencetranscriptional regulator, BadM/Rrf2 family9e-0958.9
NC_014217:1352777:136840813684081368872465Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family4e-0753.5
NC_010995:4460413:447790244779024478402501Cellvibrio japonicus Ueda107, complete genomeTranscriptional regulator family8e-0752.4
NC_014840:205723:237346237346237768423Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, BadM/Rrf2 family1e-0652
NC_020244:3681236:370137737013773701847471Bacillus subtilis XF-1, complete genomeputative transcriptional regulator9e-0648.9
NC_015138:2110149:212304021230402123483444Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeBadM/Rrf2 family transcriptional regulator9e-0648.9
NC_010520:3674883:369132836913283691729402Clostridium botulinum A3 str. Loch Maree, complete genomeputative transcriptional regulator1e-0548.9