Pre_GI: BLASTP Hits

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Query: NC_020829:3434736:3448458 Pseudomonas denitrificans ATCC 13867, complete genome

Start: 3448458, End: 3448736, Length: 279

Host Lineage: Pseudomonas denitrificans; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: An industrial strain known for the production of vitamin B12. Denitrification.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2258800:226479522647952265073279Pseudomonas mendocina NK-01 chromosome, complete genomehistone family protein DNA-binding protein2e-31134
NC_005773:1333863:135101113510111351292282Pseudomonas syringae pv. phaseolicola 1448A, complete genomeDNA-binding protein HU family2e-26117
NC_010125:2884762:288998828899882890281294Gluconacetobacter diazotrophicus PAl 5, complete genomeputative DNA binding protein1e-1478.6
NC_008609:1976403:206114520611452061411267Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein3e-1373.9
NC_011992:1234610:124592112459211246193273Acidovorax ebreus TPSY, complete genomehistone family protein DNA-binding protein6e-1372.8
NC_008782:2781229:279335227933522793624273Acidovorax sp. JS42, complete genomehistone family protein DNA-binding protein6e-1372.8
NC_007517:1792000:180801818080181808308291Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein8e-1372.4
NC_008344:669498:669498669498669770273Nitrosomonas eutropha C91, complete genomehistone family protein DNA-binding protein1e-1272
NC_015422:1694363:171325817132581713530273Alicycliphilus denitrificans K601 chromosome, complete genomehistone family protein DNA-binding protein1e-1271.6
NC_005085:4157257:417384941738494174118270Chromobacterium violaceum ATCC 12472, complete genomeprobable DNA-binding protein hu-beta2e-1271.2
NC_004603:3080614:310021231002123100487276Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeDNA-binding protein HU-27e-1269.3
NC_009615:4304158:431577943157794316066288Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA-binding protein HU-beta9e-1268.9
NC_007626:959684:993045993045993323279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein1e-1168.9
NC_009380:4729340:473195847319584732233276Salinispora tropica CNB-440 chromosome, complete genomehistone family protein DNA-binding protein1e-1168.6
NC_013446:1889500:189372218937221893994273Comamonas testosteroni CNB-2, complete genomehistone-like DNA-binding protein1e-1168.6
NC_007626:1038214:104975510497551050087333Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein2e-1168.2
NC_002927:3827211:386754438675443867825282Bordetella bronchiseptica RB50, complete genomehistone-like DNA-binding protein2e-1168.2
NC_014539:1839840:184259318425931842865273Burkholderia sp. CCGE1003 chromosome 1, complete sequencehistone family protein DNA-binding protein1e-1168.2
NC_007645:2204066:221540322154032215675273Hahella chejuensis KCTC 2396, complete genomeBacterial nucleoid DNA-binding protein1e-1168.2
NC_007626:2204767:225746522574652257743279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein2e-1167.8
NC_016445:2663837:270243927024392702711273Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-binding protein HU2e-1167.8
NC_007930:50801:564885648856763276Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,DNA-binding protein HU2e-1167.8
NC_012691:779826:800490800490800765276Tolumonas auensis DSM 9187, complete genomehistone family protein DNA-binding protein2e-1167.8
NC_008570:2216736:221933122193312219603273Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeDNA-binding protein HU-beta2e-1167.8
NC_007484:1975322:199732119973211997593273Nitrosococcus oceani ATCC 19707, complete genomeHistone-like DNA-binding protein3e-1167
NC_010995:2312901:231914623191462319418273Cellvibrio japonicus Ueda107, complete genomeDNA-binding protein HU superfamily3e-1167
NC_007626:2354260:236467623646762364954279Magnetospirillum magneticum AMB-1, complete genomeBacterial nucleoid DNA-binding protein6e-1166.2
NC_013715:1907503:192805219280521928339288Rothia mucilaginosa DY-18, complete genomebacterial nucleoid DNA-binding protein1e-1065.5
NC_000964:2146000:222453322245332224811279Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-1065.1
NC_007946:3683371:370576937057693706041273Escherichia coli UTI89, complete genomeDNA-binding protein HU-alpha (HU-2)1e-1065.1
NC_004463:9087290:910034791003479100625279Bradyrhizobium japonicum USDA 110, complete genomeHNS-type DNA binding protein2e-1064.7
NC_016632:1049510:106168310616831061955273Serratia symbiotica str. 'Cinara cedri' chromosome, completehistone family protein DNA-binding protein2e-1064.3
NC_017190:2130651:222540922254092225684276Bacillus amyloliquefaciens LL3 chromosome, complete genomeSPBc2 prophage-derived DNA-binding protein HU 23e-1063.5
NC_007298:1824335:184224018422401842512273Dechloromonas aromatica RCB, complete genomeHistone-like bacterial DNA-binding protein4e-1063.5
NC_016025:65923:693886938869780393Candidatus Chloracidobacterium thermophilum B chromosome chromosomenucleoid DNA-binding protein6e-1062.8
NC_008577:1885809:189988018998801900155276Shewanella sp. ANA-3 chromosome 1, complete sequencehistone family protein DNA-binding protein9e-1062.4
NC_008609:1976403:204347420434742043854381Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein1e-0962
NC_004129:4596040:460138246013824601654273Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein HU, beta subunit2e-0961.6
NC_020209:4643901:465937146593714659646276Pseudomonas poae RE*1-1-14, complete genomenucleoid protein HU subunit alpha1e-0961.6
NC_016629:3396500:342726034272603427532273Desulfovibrio africanus str. Walvis Bay chromosome, completehistone family protein DNA-binding protein1e-0961.6
NC_011725:1486635:149603414960341496306273Bacillus cereus B4264 chromosome, complete genomeDNA-binding protein HU1e-0961.6
NC_014934:3809845:382531538253153825587273Cellulophaga algicola DSM 14237 chromosome, complete genomehistone family protein DNA-binding protein2e-0961.2
NC_008322:1898000:190407619040761904351276Shewanella sp. MR-7, complete genomehistone family protein DNA-binding protein2e-0961.2
NC_004061:31500:357213572135993273Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeDNA-binding protein hu-alpha2e-0960.8
NC_004545:15650:374933749337771279Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeDNA-binding protein HU2e-0960.8
NC_009257:1023696:104281710428171043089273Francisella tularensis subsp. tularensis WY96-3418 chromosome,DNA-binding protein HU-beta3e-0960.5
NC_013939:1417750:143906514390651439358294Deferribacter desulfuricans SSM1, complete genomeintegration host factor, subunit beta3e-0960.5
NC_012560:2348202:236469223646922364964273Azotobacter vinelandii DJ, complete genomehistone-like bacterial DNA-binding protein3e-0960.5
NC_021150:2348214:236470423647042364976273Azotobacter vinelandii CA6, complete genomehistone-like DNA-binding protein3e-0960.5
NC_008601:1094041:111318411131841113456273Francisella tularensis subsp. novicida U112, complete genomeDNA-binding protein HU-beta4e-0960.1
NC_003909:3483244:350545735054573505729273Bacillus cereus ATCC 10987, complete genomeDNA-binding protein HU5e-0959.7
NC_011773:3547507:356972435697243569996273Bacillus cereus AH820 chromosome, complete genomeDNA-binding protein HU5e-0959.7
NC_002947:2589951:263308226330822633354273Pseudomonas putida KT2440, complete genomeDNA-binding protein HU-beta8e-0959.3
NC_008609:142471:182937182937183212276Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein1e-0858.9
NC_011761:1357799:137366013736601373935276Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA-binding protein HU family protein9e-0958.9
NC_015571:411156:429426429426429692267Porphyromonas gingivalis TDC60, complete genomeDNA-binding protein HU9e-0958.9
NC_007517:1561466:158627615862761586551276Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein9e-0958.9
NC_014152:191200:195060195060195332273Thermincola sp. JR, complete genomehistone family protein DNA-binding protein1e-0858.5
NC_014623:4999032:500264050026405003044405Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeintegration host factor subunit alpha2e-0858.2
NC_008609:2446246:248416824841682484461294Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein2e-0858.2
NC_016626:1699500:173783817378381738116279Burkholderia sp. YI23 plasmid byi_1p, complete sequencehistone family protein DNA-binding protein2e-0858.2
NC_002737:1207880:122263712226371222912276Streptococcus pyogenes M1 GAS, complete genomehistone-like DNA-binding protein2e-0858.2
NC_009332:653474:654160654160654435276Streptococcus pyogenes str. Manfredo chromosome, complete genomeDNA-binding protein HU2e-0858.2
NC_008095:4189082:419269841926984193087390Myxococcus xanthus DK 1622, complete genomeintegration host factor, alpha subunit1e-0858.2
NC_015942:2943127:294616129461612946511351Acidithiobacillus ferrivorans SS3 chromosome, complete genomehistone family protein DNA-binding protein2e-0857.8
NC_014532:3596097:360212336021233602398276Halomonas elongata DSM 2581, complete genomeK03530 DNA-binding protein HU-beta2e-0857.8
NC_011833:31192:353093530935587279Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha3e-0857.4
NC_009437:1556934:156381915638191564106288Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehistone family protein DNA-binding protein4e-0857
NC_008148:2290806:231410923141092314381273Rubrobacter xylanophilus DSM 9941, complete genomehistone-like DNA-binding protein5e-0856.6
NC_002528:31191:353083530835586279Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeDNA-binding protein hu-alpha4e-0856.6
NC_011834:31206:353233532335601279Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha4e-0856.6
NC_017252:31215:353313533135609279Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha4e-0856.6
NC_017253:31192:353093530935587279Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha4e-0856.6
NC_017254:31206:353233532335601279Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha4e-0856.6
NC_017255:31211:353283532835606279Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,DNA-binding protein hu-alpha4e-0856.6
NC_009483:3024115:304724230472423047520279Geobacter uraniireducens Rf4 chromosome, complete genomehistone family protein DNA-binding protein4e-0856.6
NC_013205:1187812:123004312300431230315273Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,histone family protein DNA-binding protein6e-0856.2
NC_012997:1446037:144955514495551449851297Teredinibacter turnerae T7901, complete genomeintegration host factor, beta subunit6e-0856.2
NC_002939:1634843:166893316689331669208276Geobacter sulfurreducens PCA, complete genomeintegration host factor, alpha subunit6e-0856.2
NC_010544:395386:403547403547403834288Candidatus Phytoplasma australiense, complete genomeBacterial nucleoid DNA-binding protein6e-0856.2
NC_013166:1841446:185437918543791854681303Kangiella koreensis DSM 16069, complete genomeintegration host factor, alpha subunit1e-0755.5
NC_009254:74000:792917929179569279Burkholderia vietnamiensis G4 chromosome 3, complete sequencehistone family protein DNA-binding protein1e-0755.5
NC_010815:40357:411964119641477282Geobacter lovleyi SZ plasmid pGLOV01, complete sequencehistone family protein DNA-binding protein1e-0755.1
NC_014365:2037506:205458320545832054888306Desulfarculus baarsii DSM 2075 chromosome, complete genomehistone family protein DNA-binding protein1e-0755.1
NC_007519:3326918:333138833313883331675288Desulfovibrio alaskensis G20 chromosome, complete genomehistone-like DNA-binding protein1e-0755.1
NC_018691:3525430:356799135679913568293303Alcanivorax dieselolei B5 chromosome, complete genomeIntegration host factor subunit alpha2e-0754.7
NC_011894:3319856:333073533307353331007273Methylobacterium nodulans ORS 2060, complete genomehistone family protein DNA-binding protein3e-0754.3
NC_016148:1175999:117808711780871178362276Thermovirga lienii DSM 17291 chromosome, complete genomehistone family protein DNA-binding protein3e-0753.9
NC_015942:763500:773499773499773774276Acidithiobacillus ferrivorans SS3 chromosome, complete genomehistone family protein DNA-binding protein3e-0753.9
NC_017256:30192:353573535735629273Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,DNA-binding protein HU-alpha3e-0753.9
NC_014394:1626699:163382516338251634106282Gallionella capsiferriformans ES-2 chromosome, complete genomehistone family protein DNA-binding protein3e-0753.9
NC_007716:225535:241904241904242194291Aster yellows witches'-broom phytoplasma AYWB, complete genomeDNA-binding protein HU4e-0753.5
NC_007948:1574881:160283616028361603147312Polaromonas sp. JS666, complete genomehistone-like DNA-binding protein4e-0753.5
NC_002488:1099975:114255611425561142840285Xylella fastidiosa 9a5c, complete genomehistone-like protein5e-0753.1
NC_011898:2907017:292558029255802925855276Clostridium cellulolyticum H10, complete genomehistone family protein DNA-binding protein5e-0753.1
NC_002939:2337402:233912623391262339401276Geobacter sulfurreducens PCA, complete genomeintegration host factor, alpha subunit7e-0752.8
NC_002939:2315402:233912623391262339401276Geobacter sulfurreducens PCA, complete genomeintegration host factor, alpha subunit7e-0752.8
NC_012779:1820244:182263618226361822932297Edwardsiella ictaluri 93-146, complete genomeintegration host factor, alpha subunit, putative7e-0752.8
NC_007498:1666242:167333016733301673611282Pelobacter carbinolicus DSM 2380, complete genomeintegration host factor, alpha subunit7e-0752.8
NC_008609:1976403:201336020133602013644285Pelobacter propionicus DSM 2379, complete genomehistone family protein DNA-binding protein7e-0752.8
NC_002937:1233000:123304412330441233331288Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeDNA-binding protein HU, beta subunit6e-0752.8
NC_012438:50845:681496814968424276Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA-binding protein HU 1 (DNA-binding protein II) (HB)6e-0752.8
NC_012912:2216749:224010222401022240401300Dickeya zeae Ech1591, complete genomeintegration host factor, alpha subunit1e-0652
NC_018868:569423:616427616427616732306Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeintegration host factor subunit alpha1e-0652
NC_009483:2201986:222274022227402223015276Geobacter uraniireducens Rf4 chromosome, complete genomehistone family protein DNA-binding protein1e-0652
NC_010544:816672:826737826737827027291Candidatus Phytoplasma australiense, complete genomeDNA-binding protein HU1e-0652
NC_010544:227296:234976234976235266291Candidatus Phytoplasma australiense, complete genomeDNA-binding protein HU1e-0652
NC_010544:313301:343220343220343510291Candidatus Phytoplasma australiense, complete genomeDNA-binding protein HU1e-0652
NC_010544:262000:269253269253269543291Candidatus Phytoplasma australiense, complete genomeDNA-binding protein HU1e-0652
NC_017259:25400:347703477035042273Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,DNA-binding protein HU-alpha1e-0652
NC_007517:3430237:345142234514223451715294Geobacter metallireducens GS-15, complete genomeHistone-like DNA-binding protein1e-0652
NC_014972:3604534:361615136161513616432282Desulfobulbus propionicus DSM 2032 chromosome, complete genomehistone family protein DNA-binding protein1e-0651.6
NC_012880:2425330:242608824260882426387300Dickeya dadantii Ech703, complete genomeintegration host factor, alpha subunit1e-0651.6
NC_010723:173280:174948174948175226279Clostridium botulinum E3 str. Alaska E43, complete genomeDNA-binding protein HU2e-0651.2
NC_008095:4061899:408187440818744082257384Myxococcus xanthus DK 1622, complete genomeintegration host factor, beta subunit2e-0651.2
NC_006832:475290:492133492133492417285Ehrlichia ruminantium str. Welgevonden, complete genomePutative DNA-binding protein HU2e-0651.2
NC_008027:2051821:205420720542072054509303Pseudomonas entomophila L48, complete genomeintegration host factor (IHF), alpha subunit, DNA-binding protein, DNA replication3e-0650.4
NC_018145:1089548:110930811093081109583276Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completehistone family protein DNA-binding protein3e-0650.4
NC_020063:2011019:202932820293282029627300Enterobacteriaceae bacterium strain FGI 57, complete genomeintegration host factor, alpha subunit5e-0650.1
NC_016830:3869572:390932139093213909575255Pseudomonas fluorescens F113 chromosome, complete genomeprotein HupB5e-0650.1
NC_007613:1353500:135795113579511358250300Shigella boydii Sb227, complete genomeintegration host factor, alpha subunit4e-0650.1
NC_010658:1772994:178698617869861787285300Shigella boydii CDC 3083-94, complete genomeintegration host factor, alpha subunit4e-0650.1
NC_014483:39729:512505125051522273Paenibacillus polymyxa E681 chromosome, complete genomeDNA-binding protein HU (DNA-binding protein II)4e-0650.1
NC_016641:1639356:164996216499621650234273Paenibacillus terrae HPL-003 chromosome, complete genomeDNA-binding protein hu-alpha4e-0650.1
NC_012660:4558122:458470745847074585009303Pseudomonas fluorescens SBW25 chromosome, complete genomeintegration host factor subunit alpha4e-0650.1
NC_004129:2328491:233756823375682337870303Pseudomonas fluorescens Pf-5, complete genomeintegration host factor alpha subunit4e-0650.1
NC_007492:2203220:220711122071112207413303Pseudomonas fluorescens PfO-1, complete genomeIntegration host factor, alpha subunit4e-0650.1
NC_009434:2577717:258467925846792584981303Pseudomonas stutzeri A1501, complete genomeintegration host factor subunit alpha4e-0650.1
NC_015740:2407500:244176324417632442065303Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegration host factor subunit alpha4e-0650.1
NC_003197:1401603:141906914190691419368300Salmonella typhimurium LT2, complete genomeintegration host factor alpha subunit5e-0649.7
NC_018080:2288700:229534022953402295642303Pseudomonas aeruginosa DK2 chromosome, complete genomeintegration host factor subunit alpha5e-0649.7
NC_009656:2512733:251937325193732519675303Pseudomonas aeruginosa PA7 chromosome, complete genomeintegration host factor subunit alpha5e-0649.7
NC_002516:3079850:309981030998103100112303Pseudomonas aeruginosa PAO1, complete genomeintegration host factor subunit alpha5e-0649.7
NC_008463:2467219:247385924738592474161303Pseudomonas aeruginosa UCBPP-PA14, complete genomeintegration host factor, alpha subunit5e-0649.7
NC_016510:4343:102691026910577309Flavobacterium columnare ATCC 49512 chromosome, complete genomehistone-like DNA-binding protein HU-alpha5e-0649.7
NC_009512:3618055:363133836313383631640303Pseudomonas putida F1, complete genomeintegration host factor, alpha subunit5e-0649.7
NC_002947:2809591:281624728162472816549303Pseudomonas putida KT2440, complete genomeintegration host factor alpha subunit5e-0649.7
NC_011083:1408202:142411214241121424411300Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,integration host factor, alpha subunit5e-0649.7
NC_004631:1271500:128751212875121287811300Salmonella enterica subsp. enterica serovar Typhi Ty2, completeintegration host factor alpha subunit5e-0649.7
NC_011147:1573470:157465315746531574952300Salmonella enterica subsp. enterica serovar Paratyphi A strintegration host factor subunit alpha5e-0649.7
NC_017046:1358531:137599713759971376296300Salmonella enterica subsp. enterica serovar Typhimurium str. 798integration host factor subunit alpha5e-0649.7
NC_016863:1359769:137723513772351377534300Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1integration host factor subunit alpha5e-0649.7
NC_016860:1399290:141675614167561417055300Salmonella enterica subsp. enterica serovar Typhimurium strintegration host factor subunit alpha5e-0649.7
NC_016857:1358456:137592213759221376221300Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74integration host factor subunit alpha5e-0649.7
NC_016856:1411579:142904514290451429344300Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sintegration host factor subunit alpha5e-0649.7
NC_016832:1269018:128648512864851286784300Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Integration host factor subunit alpha5e-0649.7
NC_016831:1166868:118433111843311184630300Salmonella enterica subsp. enterica serovar Gallinarum/pullorumIntegration host factor alpha-subunit5e-0649.7
NC_016810:1358456:137592213759221376221300Salmonella enterica subsp. enterica serovar Typhimurium strintegration host factor subunit alpha5e-0649.7
NC_015383:368500:376195376195376473279Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequencehistone family protein DNA-binding protein8e-0649.3
NC_014972:2503107:251001825100182510305288Desulfobulbus propionicus DSM 2032 chromosome, complete genomehistone family protein DNA-binding protein7e-0649.3
NC_016631:5378810:539409553940955394448354Granulicella mallensis MP5ACTX8 chromosome, complete genomehistone family protein DNA-binding protein7e-0649.3
NC_015589:2555000:256458325645832564867285Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehistone family protein DNA-binding protein9e-0648.9
NC_017191:1173989:123411912341191234394276Bacillus amyloliquefaciens XH7 chromosome, complete genomehistone-like prokaryotic DNA-binding protein9e-0648.9
NC_017188:1172181:123254212325421232817276Bacillus amyloliquefaciens TA208 chromosome, complete genomeputative HU-related DNA-binding protein; phage SPbeta9e-0648.9