Pre_GI: BLASTP Hits

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Query: NC_020453:3950838:3988683 Agromonas oligotrophica S58 DNA, complete genome

Start: 3988683, End: 3990494, Length: 1812

Host Lineage: Bradyrhizobium oligotrophicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing oligotrophic bacterium, which was isolated from paddy field soil. Anoxygenic photosynthesis, Carbon fixation, Denitrification, Nitrogen fixation, Thiosulfate oxidation, Endosymbiont.




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Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007404:1776147:1776147177614717785012355Thiobacillus denitrificans ATCC 25259, complete genomeputative type IV secretory pathway VirD4 components4e-67256
NC_010943:3069082:3098061309806130999351875Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretory protein conjugation protein TraD4e-47189
NC_015850:1006980:1013904101390410157931890Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein8e-40165
NC_012969:2136243:2172129217212921743752247Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein9e-33142
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD1e-26121
NC_008322:1186000:1186944118694411889171974Shewanella sp. MR-7, complete genomehypothetical protein1e-25118
NC_009998:62000:7347873478756042127Shewanella baltica OS195 plasmid pS19501, complete sequencetype IV conjugative transfer system coupling protein TraD3e-25117
NC_016846:24500:5201252012542912280Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer protein TraD8e-25115
NC_010660:175200:1802001802001822452046Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence3e-24113
NC_007385:157516:1664251664251686262202Shigella sonnei Ss046 plasmid pSS_046, complete sequenceTraD protein6e-24112
NC_004460:708416:7124647124647145572094Vibrio vulnificus CMCP6 chromosome II, complete sequenceType IV secretory pathway, VirD4 component3e-23110
NC_007607:87000:9356593565950791515Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein6e-23109
NC_011891:1225000:1245654124565412471831530Anaeromyxobacter dehalogenans 2CP-1, complete genometype IV secretion system protein VirD41e-22108
NC_010606:25090:2655826558287172160Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceType IV secretory pathway, VirD4 component3e-21103
NC_009787:17344:4718471869492232Escherichia coli E24377A plasmid pETEC_35, complete sequencetype IV conjugative transfer system coupling protein TraD1e-20101
NC_009484:2660048:2677156267715626790061851Acidiphilium cryptum JF-5 chromosome, complete genomeType IV secretory pathway VirD4 components-like protein3e-20100
NC_016626:1751159:1754229175422917558721644Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative TraB protein, type IV secretion system8e-2099.4
NC_009007:57804:7373273732760142283Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraG1e-1998.2
NC_007722:2954876:2956825295682529590802256Erythrobacter litoralis HTCC2594, complete genomeTraD3e-1997.1
NC_007722:168937:1869601869601892992340Erythrobacter litoralis HTCC2594, complete genomeTraD2e-1894.7
NC_007722:851129:8667998667998691382340Erythrobacter litoralis HTCC2594, complete genomeTraD2e-1894.4
NC_010170:3908500:3929234392923439308801647Bordetella petrii, complete genometype IV secretion system protein VirD43e-1893.6
NC_016631:3917253:3934403393440339363731971Granulicella mallensis MP5ACTX8 chromosome, complete genomeType IV secretion system, TraD, DNA-binding domain protein4e-1893.6
NC_015458:327009:3591473591473608261680Pusillimonas sp. T7-7 chromosome, complete genomeTrwB1e-1792.4
NC_011916:467106:4915124915124933291818Caulobacter crescentus NA1000 chromosome, complete genomeconjugation protein, ATP binding domain trwB3e-1584.3
NC_014819:25765:4626046260488752616Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein2e-1481.3
NC_017044:702483:7220847220847237781695Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugative transfer protein TraD6e-1376.3
NC_009256:2945059:2957802295780229600452244Burkholderia vietnamiensis G4 chromosome 1, complete sequenceType IV secretory pathway VirD4 components-like protein3e-1273.9
NC_012483:3731542:3752837375283737548311995Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein3e-1273.9
NC_012483:3672768:3674604367460436766042001Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein2e-1171.2
NC_015563:3203012:3212622321262232146522031Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein3e-0964.3
NC_010793:1468849:1468849146884914703841536Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD3e-0963.9
NC_010793:1811401:1863476186347618652301755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-0861.6
NC_009488:89844:1125211125211142781758Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein6e-0859.7
NC_010793:1508974:1513498151349815152521755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-0758.5
NC_010793:1158279:1169124116912411708781755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-0758.5
NC_010793:416849:4208424208424225961755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-0758.5
NC_005090:1033746:1045289104528910471001812Wolinella succinogenes DSM 1740, complete genomeCONJUGAL TRANSFER PROTEIN (TRAG)4e-0757
NC_017372:748097:7818747818747841262253Helicobacter pylori India7 chromosome, complete genomeVirD4 coupling protein4e-0757
NC_010793:1628500:1641810164181016428201011Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD5e-0756.6
NC_009488:1465781:1479205147920514803501146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein9e-0755.8
NC_009488:1391975:1405801140580114069461146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein9e-0755.8
NC_009488:1673756:1685432168543216865771146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein9e-0755.8
NC_009488:1249492:125489812548981255854957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein9e-0755.8
NC_009488:803873:809270809270810226957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein9e-0755.8
NC_017361:1528239:1543901154390115460332133Helicobacter pylori SouthAfrica7 chromosome, complete genomeconjugal transfer protein (traG)1e-0655.5
NC_017044:702483:719163719163719666504Rickettsia parkeri str. Portsmouth chromosome, complete genomeputative conjugative transfer protein TraD1e-0655.1
NC_017028:1030000:104422810442281045058831Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeputative conjugative transfer protein TraD2e-0654.3