Pre_GI: BLASTP Hits

Some Help

Query: NC_020244:3961337:3964998 Bacillus subtilis XF-1, complete genome

Start: 3964998, End: 3965708, Length: 711

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system. The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000964:4116104:412221741222174122927711Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-113409
NC_016047:4108910:411572641157264116436711Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeCrp/Fnr family transcriptional regulator1e-112405
NC_017195:3919000:392472639247263925436711Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, GntR family9e-112402
NC_014479:3939183:394430239443023945012711Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative GntR family transcriptional regulator2e-111401
NC_018607:290500:304834304834305400567Brachyspira pilosicoli B2904 chromosome, complete genomeUbiC transcription regulator-associated protein4e-26118
NC_020291:5808856:583221158322115832921711Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeHTH-type transcriptional regulator GmuR2e-1995.9
NC_013517:4117666:411846741184674119201735Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, GntR family3e-1478.6
NC_015424:2510764:252788125278812528600720Aeromonas veronii B565 chromosome, complete genometranscriptional regulator of succinyl-CoA synthetase operon1e-1273.6
NC_012984:2681548:269874826987482699473726Lactobacillus plantarum JDM1, complete genometranscription regulator4e-1272
NC_016605:132253:136693136693137394702Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeGntR family transcriptional regulator4e-1271.6
NC_015602:1143038:114488711448871145612726Lactobacillus kefiranofaciens ZW3 chromosome, complete genometranscriptional regulator5e-1271.2
NC_014829:3964616:398018939801893980911723Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, GntR family9e-1270.5
NC_016902:2361628:236672623667262367424699Escherichia coli KO11FL chromosome, complete genomeGntR family transcriptional regulator7e-1167.4
NC_010498:1615980:162269216226921623390699Escherichia coli SMS-3-5, complete genomeGntR family transcriptional regulator7e-1167.4
NC_008563:1651270:166368316636831664381699Escherichia coli APEC O1, complete genomeputative transcriptional regulator7e-1167.4
CP002185:1727493:173843117384311739129699Escherichia coli W, complete genomeputative transcriptional regulator7e-1167.4
CP002516:2361628:236672623667262367424699Escherichia coli KO11, complete genometranscriptional regulator, GntR family7e-1167.4
CU928160:1625535:163647316364731637171699Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator HTH family7e-1167.4
NC_011415:1715644:172658217265821727280699Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator7e-1167.4
NC_011741:1625535:163647316364731637171699Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator HTH family7e-1167.4
NC_009800:1632585:164256316425631643282720Escherichia coli HS, complete genometranscriptional regulator, GntR family9e-1167
NC_015566:2420287:242680924268092427513705Serratia sp. AS12 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain1e-1067
NC_015567:2420169:242669124266912427395705Serratia sp. AS9 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain1e-1067
NC_015376:2061990:208370120837012084468768Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator8e-1063.9
NC_008390:2156188:215618821561882156958771Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, GntR family2e-0962.8
NC_004337:3590323:388820638882063888880675Shigella flexneri 2a str. 301, complete genomeputative transcriptional regulator2e-0962.8
NC_008595:5168941:518281951828195183520702Mycobacterium avium 104, complete genomeGntR-family protein transcriptional regulator6e-0961.2
NC_011751:4795928:480780348078034808528726Escherichia coli UMN026 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF2e-0859.7
NC_008525:1493317:149648314964831497184702Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator2e-0859.3
NC_011750:4719477:473003347300334730758726Escherichia coli IAI39 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF3e-0858.9
NC_017338:470993:484040484040484768729Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetrehalose operon transcription repressor3e-0858.5
NC_021066:4177217:419493041949304195649720Raoultella ornithinolytica B6, complete genome2-aminoethylphosphonate uptake and metabolism regulator3e-0858.5
NC_010468:4305105:431153943115394312264726Escherichia coli ATCC 8739, complete genometranscriptional regulator, GntR family4e-0858.2
CU928160:4395156:440560944056094406334726Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation4e-0858.2
NC_008253:4541915:455430345543034555028726Escherichia coli 536, complete genomeprobable transcriptional regulator PhnF4e-0858.2
NC_010498:4656716:466719446671944667919726Escherichia coli SMS-3-5, complete genomephosphonates metabolism transcriptional regulator PhnF5e-0858.2
NC_011742:4569683:458277245827724583497726Escherichia coli S88 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF5e-0858.2
NC_008563:4656000:466824446682444668975732Escherichia coli APEC O1, complete genomePhnF, putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation5e-0858.2
NC_013941:5013695:502541850254185026143726Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphonates metabolism transcriptional regulator PhnF5e-0858.2
NC_013008:5196080:520781352078135208538726Escherichia coli O157:H7 str. TW14359 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF5e-0858.2
NC_011353:5240020:525175252517525252477726Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF5e-0858.2
CP002185:4566150:458018845801884580913726Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation5e-0858.2
NC_002655:5194804:520653752065375207262726Escherichia coli O157:H7 EDL933, complete genomeputative transcriptional regulator5e-0858.2
NC_007613:4156841:417088841708884171613726Shigella boydii Sb227, complete genomeputative transcriptional regulator5e-0858.2
NC_002695:5164819:517655251765525177277726Escherichia coli O157:H7 str. Sakai, complete genomePhnF5e-0858.2
NC_007606:3842708:385069838506983851423726Shigella dysenteriae Sd197, complete genomeputative transcriptional regulator5e-0858.2
NC_009801:4643000:465358346535834654308726Escherichia coli E24377A, complete genomephosphonates metabolism transcriptional regulator PhnF4e-0858.2
CP002516:4431235:443817644381764438901726Escherichia coli KO11, complete genomephosphonate C-P lyase system transcriptional regulator PhnF, GntR family4e-0858.2
NC_016902:4431235:443817644381764438901726Escherichia coli KO11FL chromosome, complete genomephosphonate C-P lyase system transcriptional regulator PhnF4e-0858.2
NC_013364:5040268:505430650543065055031726Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation PhnF4e-0858.2
NC_013353:5022196:503278650327865033511726Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional regulator of phosphonate uptake and biodegradation PhnF4e-0858.2
NC_012967:4289929:430051943005194301244726Escherichia coli B str. REL606 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF4e-0858.2
NC_012947:4106031:411286441128644113589726Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephosphonate metabolism transcriptional regulator PhnF4e-0858.2
NC_012759:4247865:425845542584554259180726Escherichia coli BW2952 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF4e-0858.2
NC_011741:4395156:440560944056094406334726Escherichia coli IAI1 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF4e-0858.2
NC_011415:4582388:459297945929794593704726Escherichia coli SE11 chromosome, complete genomephosphonate metabolism transcriptional regulator PhnF4e-0858.2
NC_010473:4409492:442008244200824420807726Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation4e-0858.2
AC_000091:4313167:432637543263754327100726Escherichia coli W3110 DNA, complete genometranscriptional regulator of phosphonate uptake and biodegradation4e-0858.2
NC_000913:4307471:431972043197204320445726Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation4e-0858.2
NC_011748:4695932:470645147064514707176726Escherichia coli 55989, complete genomephosphonate metabolism transcriptional regulator PhnF4e-0858.2
AP010958:5022196:503278650327865033511726Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation PhnF4e-0858.2
CU928145:4695932:470645147064514707176726Escherichia coli 55989 chromosome, complete genomeputative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation4e-0858.2
NC_017337:498688:512387512387513115729Staphylococcus aureus subsp. aureus ED133 chromosome, completetrehalose operon repressor6e-0857.8
NC_004431:4867648:488073748807374881471735Escherichia coli CFT073, complete genomeProbable transcriptional regulator phnF6e-0857.8
NC_002952:494500:508595508595509323729Staphylococcus aureus subsp. aureus MRSA252, complete genomeGntR family regulatory protein6e-0857.8
NC_008497:556365:574068574068574769702Lactobacillus brevis ATCC 367, complete genomeTranscriptional regulator6e-0857.8
NC_007384:4530000:454049745404974541222726Shigella sonnei Ss046, complete genomeputative transcriptional regulator6e-0857.8
NC_002758:511247:524944524944525672729Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to trehalose operon transcription repressor treR6e-0857.8
NC_002745:487500:500630500630501358729Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein6e-0857.8
NC_003923:473743:486009486009486737729Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein6e-0857.8
NC_009487:522193:535890535890536618729Staphylococcus aureus subsp. aureus JH9 chromosome, completeGntR family transcriptional regulator6e-0857.8
NC_009632:522264:535961535961536689729Staphylococcus aureus subsp. aureus JH1 chromosome, completetrehalose operon repressor6e-0857.8
NC_013450:448054:461751461751462479729Staphylococcus aureus subsp. aureus ED98, complete genomeGntR family transcriptional regulator6e-0857.8
NC_016822:4686971:469742446974244698149726Shigella sonnei 53G, complete genomephosphonate metabolism transcriptional regulator PhnF6e-0857.8
NC_016816:2073677:208895120889512089655705Pantoea ananatis LMG 5342, complete genomeGntR family transcriptional regulator2e-0755.8
NC_015389:1977736:198394319839431984632690Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family4e-0755.5
NC_008095:7614000:761995076199507620693744Myxococcus xanthus DK 1622, complete genometranscriptional regulator, GntR family3e-0755.5
NC_009800:4332229:434626743462674346992726Escherichia coli HS, complete genomephosphonates metabolism transcriptional regulator PhnF3e-0755.5
NC_015275:3761889:377743137774313778168738Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, GntR family with UTRA sensor domain5e-0754.7
NC_015975:380500:405127405127405825699Lactobacillus ruminis ATCC 27782 chromosome, complete genomeGntR family transcriptional regulator6e-0754.7
NC_013061:4286913:4291965429196542929901026Pedobacter heparinus DSM 2366, complete genomeregulatory protein GntR HTH8e-0753.9
NC_015978:412856:431333431333432055723Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein1e-0653.5
NC_016113:803268:812013812013812744732Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceProtein korA1e-0653.5
NC_011740:3739395:374508437450843745848765Escherichia fergusonii ATCC 35469, complete genomeputative GntR-family transcriptional regulator2e-0652.8
NC_015942:63440:819408194082698759Acidithiobacillus ferrivorans SS3 chromosome, complete genomeGntR family transcriptional regulator with UTRA sensor domain2e-0652.8
NC_013510:5115500:512128951212895122107819Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family3e-0652.4
NC_013595:151500:158906158906159691786Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, GntR family4e-0652
NC_014210:723719:733347733347734111765Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family4e-0651.6
NC_004193:375416:640434640434641180747Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator4e-0651.6
NC_007712:433500:437760437760438524765Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator7e-0651.2
NC_013510:5115500:512327551232755124111837Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, GntR family6e-0651.2
NC_015389:905165:911425911425912195771Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, GntR family6e-0651.2
NC_014532:349384:349384349384350133750Halomonas elongata DSM 2581, complete genometranscriptional regulator, GntR family6e-0651.2
NC_006905:3913988:392410639241063924849744Salmonella enterica subsp. enterica serovar Choleraesuis strputative regulatory protein, gntR family6e-0651.2
NC_007929:1290568:129384012938401294538699Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, GntR family6e-0651.2
NC_011147:3755725:376825037682503768993744Salmonella enterica subsp. enterica serovar Paratyphi A strGntR family transcriptional regulator9e-0650.8
NC_011094:3853036:386615138661513866894744Salmonella enterica subsp. enterica serovar Schwarzengrund strGntR family transcriptional regulator9e-0650.8
NC_003198:3855157:386361438636143864357744Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative GntR-family transcriptional regulator9e-0650.8
NC_004631:3841975:384910438491043849847744Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative GntR-family transcriptional regulator9e-0650.8
NC_011083:3985618:399864839986483999391744Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative GntR-family transcriptional regulator9e-0650.8
NC_011149:3895921:390895139089513909694744Salmonella enterica subsp. enterica serovar Agona str. SL483,putative GntR-family transcriptional regulator9e-0650.8
NC_011080:3941909:395502339550233955766744Salmonella enterica subsp. enterica serovar Newport str. SL254,putative GntR-family transcriptional regulator9e-0650.8
NC_006511:3759550:377257137725713773314744Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative GntR-family transcriptional regulator9e-0650.8
NC_010102:3919999:393253339325333933276744Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-0650.8
NC_003197:3971905:398443939844393985182744Salmonella typhimurium LT2, complete genomeputative regulatory protein9e-0650.8
NC_016935:3819500:382680038268003827531732Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator9e-0650.8
NC_016810:3993863:400575240057524006495744Salmonella enterica subsp. enterica serovar Typhimurium strGntR family transcriptional regulator9e-0650.8
NC_016856:3985597:399813139981313998874744Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein9e-0650.8
NC_016857:3993864:400575340057534006496744Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74GntR family transcriptional regulator9e-0650.8
NC_013199:392450:395358395358396098741Lactobacillus rhamnosus Lc 705, complete genometranscriptional regulator, GntR family7e-0650.8
NC_014206:1694330:1708771170877117098651095Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator7e-0650.8
NC_014915:1909275:1929734192973419308281095Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, GntR family with LacI sensor7e-0650.8
NC_013411:2767400:2789798278979827908921095Geobacillus sp. Y412MC61, complete genometranscriptional regulator, GntR family with LacI sensor7e-0650.8
NC_016593:2015321:2015321201532120164151095Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completearabinose metabolism transcriptional repressor8e-0650.8
NC_006510:1921541:1944770194477019458641095Geobacillus kaustophilus HTA426, complete genomearabinose metabolism transcriptional repressor8e-0650.8
NC_020210:1951746:1968428196842819695221095Geobacillus sp. GHH01, complete genomearabinose metabolism transcriptional repressor8e-0650.8
NC_015690:3269000:327636032763603277091732Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator8e-0650.8
NC_011899:1603500:1607699160769916088051107Halothermothrix orenii H 168, complete genomeregulatory protein GntR HTH8e-0650.8
NC_017046:3991551:400458040045804005323744Salmonella enterica subsp. enterica serovar Typhimurium str. 798GntR family transcriptional regulator9e-0650.8
NC_016863:3933848:394573839457383946481744Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein9e-0650.8
NC_009674:3344000:335662333566233357240618Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeregulatory protein GntR HTH1e-0550.4