Pre_GI: BLASTP Hits

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Query: NC_020207:2240115:2256660 Enterococcus faecium NRRL B-2354, complete genome

Start: 2256660, End: 2257304, Length: 645

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012563:1348500:134878213487821349408627Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, GntR family1e-29129
NC_015565:1647554:166102916610291661637609Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeGntR family transcriptional regulator4e-2098.2
NC_008262:2498000:251670925167092516918210Clostridium perfringens SM101, complete genomeGntR family transcription regulator4e-1271.2
NC_004369:2968251:299215729921572992531375Corynebacterium efficiens YS-314, complete genomeputative transcription regulator4e-0961.2
NC_010610:1580483:158392515839251584302378Lactobacillus fermentum IFO 3956, complete genometranscriptional regulator2e-0859.3
NC_007929:1290568:129384012938401294538699Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, GntR family6e-0857.4
NC_007492:3180480:322535632253563226087732Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, GntR family8e-0857
NC_008525:1493317:149648314964831497184702Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator2e-0755.8
NC_013716:5020204:504139450413945042170777Citrobacter rodentium ICC168, complete genomeexu regulon transcriptional regulator4e-0755.1
NC_014246:676570:690222690222690977756Mobiluncus curtisii ATCC 43063 chromosome, complete genomeGntR family transcriptional regulator7e-0753.9
NC_003888:4613000:462376646237664624524759Streptomyces coelicolor A3(2), complete genomeGntR-family regulatory protein9e-0753.5
NC_011761:2031876:203762120376212038373753Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeGntR family transcriptional regulator2e-0652.8
NC_011206:1917408:192315319231531923905753Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator, GntR family2e-0652.8
NC_015683:2469481:248863124886312489005375Corynebacterium ulcerans BR-AD22 chromosome, complete genomeGntR family transcription regulator2e-0652.4
NC_011898:1558208:156763615676361568325690Clostridium cellulolyticum H10, complete genomeGntR domain protein3e-0652
NC_014498:99015:117301117301118044744Streptococcus pneumoniae 670-6B chromosome, complete genomeGntR family transcriptional regulator4e-0651.6
NC_010380:124655:142940142940143683744Streptococcus pneumoniae Hungary19A-6, complete genometranscriptional regulator, GntR family protein4e-0651.6
NC_012912:844339:850632850632851399768Dickeya zeae Ech1591, complete genomeGntR domain protein6e-0650.8
NC_015978:412856:431333431333432055723Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completehypothetical protein1e-0550.4