Pre_GI: BLASTP Hits

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Query: NC_020207:2240115:2251083 Enterococcus faecium NRRL B-2354, complete genome

Start: 2251083, End: 2252366, Length: 1284

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012984:3077004:3090396309039630916551260Lactobacillus plantarum JDM1, complete genomehistidine protein kinase; sensor protein2e-21103
NC_020164:887510:8875108875108887991290Staphylococcus warneri SG1, complete genomeaccessory gene regulator C1e-20101
NC_002976:1540794:1559116155911615604051290Staphylococcus epidermidis RP62A, complete genomeaccessory gene regulator protein C1e-1894.4
NC_009785:387910:4086624086624099811320Streptococcus gordonii str. Challis substr. CH1, complete genome2e-1894
NC_012004:470492:4781204781204794391320Streptococcus uberis 0140J, complete genomesensor histidine kinase5e-1479.3
NC_014393:1022843:1045758104575810470621305Clostridium cellulovorans 743B chromosome, complete genomeATP-binding region ATPase domain-containing protein5e-1479.3
NC_014328:3823902:3838941383894138402901350Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative two-component sensor histidine kinase1e-1377.8
NC_004567:343500:3717053717053730331329Lactobacillus plantarum WCFS1, complete genomehistidine protein kinase PlnB; sensor protein2e-1273.9
NC_014554:337268:3641573641573654851329Lactobacillus plantarum subsp. plantarum ST-III chromosome,histidine protein kinase PlnB; sensor protein2e-1273.9
NC_008526:2373190:238331623833162384194879Lactobacillus casei ATCC 334, complete genome9e-1271.6
NC_010999:2516000:252340825234082524250843Lactobacillus casei, complete genomeHistidin kinase (Histidine protein kinase PlnB) (Histidine protein kinase PlnB; sensor protein)1e-1171.6
NC_013198:2458080:2464226246422624655391314Lactobacillus rhamnosus GG, complete genomesensor histidine kinase, PrcK5e-1169.3
NC_014334:2307950:2314714231471423160121299Lactobacillus casei str. Zhang chromosome, complete genomeputative sensor histidine kinase PrcK4e-1066.2
NC_013199:2426686:243325824332582434148891Lactobacillus rhamnosus Lc 705, complete genomepredicted ORF9e-1065.1
NC_014829:4016000:403715440371544037987834Bacillus cellulosilyticus DSM 2522 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism3e-0963.2
NC_009922:42696:447554475545642888Alkaliphilus oremlandii OhILAs, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism1e-0861.6