Pre_GI: BLASTP Hits

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Query: NC_020207:2240115:2250316 Enterococcus faecium NRRL B-2354, complete genome

Start: 2250316, End: 2251068, Length: 753

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002976:1540794:156046715604671561138672Staphylococcus epidermidis RP62A, complete genomeaccessory gene regulator protein A1e-22106
NC_014633:583858:604072604072604797726Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceLytTR family two component transcriptional regulator7e-0651.2
NC_014328:3823902:383822538382253838944720Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative response regulator receiver domain-containing protein7e-24110
NC_010999:2516000:252425525242552525061807Lactobacillus casei, complete genomeResponse regulator4e-1375.1
NC_009785:387910:407897407897408631735Streptococcus gordonii str. Challis substr. CH1, complete genomeResponse regulator of the LytR/AlgR family1e-1790.1
NC_008526:2373190:238419923841992385005807Lactobacillus casei ATCC 334, complete genomeResponse regulator of the LytR/AlgR family4e-1375.1
NC_014334:2307950:231601723160172316823807Lactobacillus casei str. Zhang chromosome, complete genomeresponse regulator of the LytR/AlgR family4e-1375.1
NC_013199:2426686:243414124341412434917777Lactobacillus rhamnosus Lc 705, complete genomeResponse regulator of the LytR/AlgR family2e-1376.3
NC_014554:337268:365486365486366229744Lactobacillus plantarum subsp. plantarum ST-III chromosome,response regulator PlnC, activator6e-1891.3
NC_004567:343500:373034373034373777744Lactobacillus plantarum WCFS1, complete genomeresponse regulator PlnC, activator6e-1891.3
NC_004567:343500:373896373896374639744Lactobacillus plantarum WCFS1, complete genomeresponse regulator PlnD, repressor5e-25114
NC_014554:337268:366348366348367091744Lactobacillus plantarum subsp. plantarum ST-III chromosome,response regulator PlnD, repressor5e-25114
NC_012004:470492:477357477357478097741Streptococcus uberis 0140J, complete genomeresponse regulator protein7e-1890.9
NC_013198:2458080:246553224655322466320789Lactobacillus rhamnosus GG, complete genomeresponse regulator, LytR/AlgR family1e-1377
NC_012984:3077004:308966030896603090403744Lactobacillus plantarum JDM1, complete genomeresponse regulator; accesory gene regulator protein A6e-25114
NC_014393:1022843:104502710450271045773747Clostridium cellulovorans 743B chromosome, complete genometwo component transcriptional regulator, LytTR family1e-0860.1