Pre_GI: BLASTP Hits

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Query: NC_020207:2240115:2245348 Enterococcus faecium NRRL B-2354, complete genome

Start: 2245348, End: 2246646, Length: 1299

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011134:533679:5453435453435467101368Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetransport protein ComB3e-25116
NC_012470:1635516:1646301164630116476681368Streptococcus equi subsp. zooepidemicus, complete genometransport protein ComB6e-25115
NC_010999:2516000:2518578251857825199571380Lactobacillus casei, complete genomeSppE2e-23110
NC_008526:2373190:2375759237575923771381380Lactobacillus casei ATCC 334, complete genomelactococcin A ABC transporter permease protein5e-23108
NC_014334:2307950:2310519231051923118981380Lactobacillus casei str. Zhang chromosome, complete genomelactococcin A ABC transporter permease protein2e-22107
NC_013198:2458080:2460083246008324614621380Lactobacillus rhamnosus GG, complete genomelactococcin A ABC transporter, permease protein8e-21102
NC_004567:343500:3786023786023799781377Lactobacillus plantarum WCFS1, complete genomebacteriocin ABC transporter, accessory factor PlnH4e-21102
NC_014554:337268:3710543710543724301377Lactobacillus plantarum subsp. plantarum ST-III chromosome,bacteriocin ABC transporter, accessory factor PlnH4e-21102
NC_013199:2426686:242869224286922429507816Lactobacillus rhamnosus Lc 705, complete genomepredicted ORF2e-1273.9
NC_014012:1097938:1100244110024411016531410Shewanella violacea DSS12, complete genomeHlyD family secretion protein7e-0962
NC_016627:3972751:3984018398401839855531536Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein3e-0756.6
NC_009633:1058000:1079458107945810809331476Alkaliphilus metalliredigens QYMF chromosome, complete genomesecretion protein HlyD family protein1e-0551.6