Pre_GI: BLASTP Hits

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Query: NC_020207:1346579:1378628 Enterococcus faecium NRRL B-2354, complete genome

Start: 1378628, End: 1379641, Length: 1014

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:2435241:2447956244795624490201065Clostridium botulinum B str. Eklund 17B, complete genomeputative carbohydrate diacid regulator9e-30131
NC_010723:2231834:2245939224593922470031065Clostridium botulinum E3 str. Alaska E43, complete genomesugar diacid utilization regulator6e-29128
NC_015565:824448:8333528333528345121161Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetranscriptional regulator CdaR5e-24112
NC_007644:2452244:2470892247089224720641173Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, CdaR3e-1892.8
NC_016935:2347691:2379588237958823807121125Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transcriptional regulator5e-1479
NC_013521:2924540:2927295292729529283771083Sanguibacter keddieii DSM 10542, complete genomesugar diacid utilization regulator3e-1376.3
NC_009848:3582384:3597045359704535981571113Bacillus pumilus SAFR-032, complete genomesugar diacid utilization regulator5e-1375.5
NC_012779:3570720:3588068358806835891891122Edwardsiella ictaluri 93-146, complete genomecarbohydrate diacid regulator1e-1273.9
NC_015690:1818333:1849573184957318508381266Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative transcriptional regulator3e-1273.2
NC_011184:2421687:2421687242168724228321146Vibrio fischeri MJ11 chromosome I, complete sequencecarbohydrate diacid regulator8e-1271.6
NC_014364:4488875:4514838451483845159981161Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, CdaR8e-1271.2
NC_012912:1200000:1201702120170212028591158Dickeya zeae Ech1591, complete genometranscriptional regulator, CdaR3e-1169.7
NC_014328:3120145:3124197312419731253481152Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sugar diacid regulator3e-0962.8
NC_006351:142788:1658761658761670961221Burkholderia pseudomallei K96243 chromosome 2, complete sequencetranscriptional regulator5e-0858.9
NC_009078:142794:1656301656301670961467Burkholderia pseudomallei 1106a chromosome II, complete sequencecarbohydrate diacid regulator8e-0858.2
NC_007435:1981164:2004189200418920056551467Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative transcriptional regulator8e-0858.2
NC_014831:1763408:1778649177864917808502202Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, PucR family6e-0755.5