Pre_GI: BLASTN Hits

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Query: NC_020134:420500 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 420500, End: 447626, Length: 27127

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:2927793*2927793295011722325Clostridium thermocellum ATCC 27405, complete genome02880BLASTN svgBLASTP svg
NC_020134:13283021328302134815619855Clostridium stercorarium subsp. stercorarium DSM 8532, complete02567BLASTN svgBLASTP svg
NC_020134:845164*84516486862923466Clostridium stercorarium subsp. stercorarium DSM 8532, complete02565BLASTN svgBLASTP svg
NC_020134:19415231941523198006638544Clostridium stercorarium subsp. stercorarium DSM 8532, complete02220BLASTN svgBLASTP svg
NC_009012:3204696*3204696322373319038Clostridium thermocellum ATCC 27405, complete genome7e-143515BLASTN svgBLASTP svg
NC_014721:11437114375007438638Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete1e-76295BLASTN svgBLASTP svg
NC_014657:1775929*1775929179657020642Caldicellulosiruptor owensensis OL chromosome, complete genome1e-64256BLASTN svgBLASTP svg
NC_009012:2953638*2953638301754363906Clostridium thermocellum ATCC 27405, complete genome6e-57230BLASTN svgBLASTP svg
NC_014657:21275002127500214809920600Caldicellulosiruptor owensensis OL chromosome, complete genome9e-56226BLASTN svgBLASTP svg
NC_015519:1081539*1081539110572524187Tepidanaerobacter sp. Re1 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_006138:3355028*3355028337842323396Desulfotalea psychrophila LSv54, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_014829:178000*17800020009922100Bacillus cellulosilyticus DSM 2522 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_019897:329945*32994537695547011Thermobacillus composti KWC4 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_019978:178277*17827721455436278Halobacteroides halobius DSM 5150, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_006138:1245944*1245944128539239449Desulfotalea psychrophila LSv54, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_013205:289291*28929131395124661Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,3e-1281.8BLASTN svgBLASTP svg
NC_009437:25791612579161262292443764Caldicellulosiruptor saccharolyticus DSM 8903, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009437:27780612778061280974231682Caldicellulosiruptor saccharolyticus DSM 8903, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009437:283382*28338230213118750Caldicellulosiruptor saccharolyticus DSM 8903, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_009437:475817*47581749786122045Caldicellulosiruptor saccharolyticus DSM 8903, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007645:6350079*6350079637233822260Hahella chejuensis KCTC 2396, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015949:24182322418232245692138690Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012034:2676943*2676943271390936967Anaerocellum thermophilum DSM 6725, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009437:16617916617918631320135Caldicellulosiruptor saccharolyticus DSM 8903, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012467:916000*91600093809922100Streptococcus pneumoniae P1031, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014376:1472304*1472304152278950486Clostridium saccharolyticum WM1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014448:626909*62690964844221534Mycoplasma hyorhinis HUB-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014551:157418*15741818251925102Bacillus amyloliquefaciens DSM 7, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015711:5479879*5479879550459924721Myxococcus fulvus HW-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018750:5828000*5828000585027722278Streptomyces venezuelae ATCC 10712, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020126:4430142*4430142445344823307Myxococcus stipitatus DSM 14675, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013216:293571*29357131635022780Desulfotomaculum acetoxidans DSM 771, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015921:387451*38745140893921489Borrelia bissettii DN127 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011567:139598*13959816123721640Anoxybacillus flavithermus WK1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003888:5042283*5042283508756145279Streptomyces coelicolor A3(2), complete genome3e-0661.9BLASTN svgBLASTP svg