Pre_GI: BLASTN Hits

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Query: NC_020134:343402 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 343402, End: 363675, Length: 20274

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014219:3254268*3254268329570341436Bacillus selenitireducens MLS10 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021171:45194954519495453887119377Bacillus sp. 1NLA3E, complete genome5e-26127BLASTN svgBLASTP svg
NC_010723:34340003434000345694922950Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018867:11616481161648121259950952Dehalobacter sp. CF chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_012914:97000097000099380123802Paenibacillus sp. JDR-2, complete genome9e-0660BLASTN svgBLASTP svg