Query: NC_020134:2772500 Clostridium stercorarium subsp. stercorarium DSM 8532, complete
Start: 2772500, End: 2792546, Length: 20047
Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_013205:2610956* | 2610956 | 2661173 | 50218 | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446, | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009922:2721343* | 2721343 | 2763935 | 42593 | Alkaliphilus oremlandii OhILAs, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009725:2859630 | 2859630 | 2900303 | 40674 | Bacillus amyloliquefaciens FZB42, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011772:4875893 | 4875893 | 4911962 | 36070 | Bacillus cereus G9842, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_006270:4014000 | 4014000 | 4036704 | 22705 | Bacillus licheniformis ATCC 14580, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010184:4763932* | 4763932 | 4786144 | 22213 | Bacillus weihenstephanensis KBAB4, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014652:1091610 | 1091610 | 1114612 | 23003 | Caldicellulosiruptor hydrothermalis 108 chromosome, complete | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010674:2930259 | 2930259 | 2949576 | 19318 | Clostridium botulinum B str. Eklund 17B, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010723:2735196 | 2735196 | 2753886 | 18691 | Clostridium botulinum E3 str. Alaska E43, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014376:3732547* | 3732547 | 3778469 | 45923 | Clostridium saccharolyticum WM1 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_020291:684500* | 684500 | 702717 | 18218 | Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009012:2661795* | 2661795 | 2685908 | 24114 | Clostridium thermocellum ATCC 27405, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014828:2657623* | 2657623 | 2681078 | 23456 | Ethanoligenens harbinense YUAN-3 chromosome, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008576:4130000 | 4130000 | 4151904 | 21905 | Magnetococcus sp. MC-1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015690:75223 | 75223 | 103698 | 28476 | Paenibacillus mucilaginosus KNP414 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_019960:1658657* | 1658657 | 1749852 | 91196 | Prevotella dentalis DSM 3688 chromosome 1, complete sequence | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015519:924000* | 924000 | 942023 | 18024 | Tepidanaerobacter sp. Re1 chromosome, complete genome | 7e-19 | 103 | BLASTN svg | BLASTP svg |
NC_014410:51711* | 51711 | 90034 | 38324 | Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome, | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_019970:35985 | 35985 | 76487 | 40503 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_014377:1546124 | 1546124 | 1572346 | 26223 | Thermosediminibacter oceani DSM 16646 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_000853:771746* | 771746 | 798601 | 26856 | Thermotoga maritima MSB8, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_013642:545464* | 545464 | 572304 | 26841 | Thermotoga naphthophila RKU-10, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |