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Query: NC_020134:1328302 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1328302, End: 1348156, Length: 19855

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009012:3324000*3324000334828724288Clostridium thermocellum ATCC 27405, complete genome02650BLASTN svgBLASTP svg
NC_020134:42050042050044762627127Clostridium stercorarium subsp. stercorarium DSM 8532, complete02567BLASTN svgBLASTP svg
NC_020134:845164*84516486862923466Clostridium stercorarium subsp. stercorarium DSM 8532, complete02565BLASTN svgBLASTP svg
NC_020134:19415231941523198006638544Clostridium stercorarium subsp. stercorarium DSM 8532, complete02214BLASTN svgBLASTP svg
NC_009012:3204696*3204696322373319038Clostridium thermocellum ATCC 27405, complete genome01342BLASTN svgBLASTP svg
NC_020134:134875*13487515980324929Clostridium stercorarium subsp. stercorarium DSM 8532, complete01304BLASTN svgBLASTP svg
NC_014721:11437114375007438638Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete9e-77295BLASTN svgBLASTP svg
NC_014657:1775929*1775929179657020642Caldicellulosiruptor owensensis OL chromosome, complete genome8e-65256BLASTN svgBLASTP svg
NC_014657:21275002127500214809920600Caldicellulosiruptor owensensis OL chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_009437:475817*47581749786122045Caldicellulosiruptor saccharolyticus DSM 8903, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009437:283382*28338230213118750Caldicellulosiruptor saccharolyticus DSM 8903, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009437:27780612778061280974231682Caldicellulosiruptor saccharolyticus DSM 8903, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009437:25791612579161262292443764Caldicellulosiruptor saccharolyticus DSM 8903, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015949:24182322418232245692138690Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012034:2676943*2676943271390936967Anaerocellum thermophilum DSM 6725, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009437:16617916617918631320135Caldicellulosiruptor saccharolyticus DSM 8903, complete genome1e-0869.9BLASTN svgBLASTP svg