Pre_GI: BLASTP Hits

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Query: NC_020134:845164:853409 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 853409, End: 854509, Length: 1101

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017080:3317701:3319263331926333203631101Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein2e-150532
NC_015588:475723:4816014816014827071107Isoptericola variabilis 225 chromosome, complete genomePfkB domain protein1e-140499
NC_013501:1337489:1347521134752113485491029Rhodothermus marinus DSM 4252, complete genomePfkB domain protein3e-58225
NC_015732:684000:6840476840476850841038Spirochaeta caldaria DSM 7334 chromosome, complete genomePfkB domain-containing protein8e-58224
NC_007644:416000:4217024217024227241023Moorella thermoacetica ATCC 39073, complete genomePfkB1e-51204
NC_013171:1731491:1738524173852417395491026Anaerococcus prevotii DSM 20548, complete genomePfkB domain protein1e-51203
NC_017243:1558000:1568925156892515699471023Brachyspira intermedia PWS/A chromosome, complete genome2-keto-3-deoxygluconate kinase5e-51201
NS_000191:120700:1240501240501250751026Uncultured Termite group 1 bacterium phylotype Rs-D17, complete2-dehydro-3-deoxygluconokinase4e-49195
NC_008536:2717891:2720535272053527215691035Solibacter usitatus Ellin6076, complete genomePfkB domain protein5e-49195
NC_015519:1888917:1894151189415118951761026Tepidanaerobacter sp. Re1 chromosome, complete genomePfkB domain-containing protein1e-48194
NC_007907:3722500:3732054373205437330761023Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-43176
NC_008593:640000:6498956498956509171023Clostridium novyi NT, complete genome2-dehydro-3-deoxygluconokinase4e-40165
NC_014392:2311243:2316315231631523173431029Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomePfkB domain protein2e-39163
NC_014657:2236193:2258232225823222592601029Caldicellulosiruptor owensensis OL chromosome, complete genomepfkb domain protein2e-39163
NC_009437:2889466:2892786289278628938141029Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeribokinase-like domain-containing protein2e-38160
NC_014721:2043910:2048268204826820492961029Caldicellulosiruptor kristjanssonii 177R1B chromosome, completepfkb domain protein3e-38159
NC_014652:163347:1715051715051725331029Caldicellulosiruptor hydrothermalis 108 chromosome, completepfkb domain protein7e-38158
NC_015949:47414:5712157121582031083Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomePfkB domain-containing protein6e-38158
NC_015949:428923:4397244397244408061083Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomePfkB domain-containing protein6e-38158
NC_010516:359310:3714813714813724851005Clostridium botulinum B1 str. Okra, complete genomeputative 2-dehydro-3-deoxygluconokinase5e-38158
NC_014650:2097900:2104582210458221056011020Geobacillus sp. Y4.1MC1 chromosome, complete genomePfkB domain-containing protein4e-35149
NC_015425:841754:8498778498778508961020Clostridium botulinum BKT015925 chromosome, complete genome2-dehydro-3-deoxygluconokinase3e-31136
NC_015389:616430:6818306818306829061077Coriobacterium glomerans PW2 chromosome, complete genomePfkB domain protein1e-30134
NC_004193:3325612:3332555333255533335681014Oceanobacillus iheyensis HTE831, complete genome2-dehydro-3-deoxygluconokinase5e-27122
NC_016010:137658:1376581376581386801023Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete2-keto-3-deoxygluconate kinase6e-27121
NC_011969:4556296:4557021455702145580371017Bacillus cereus Q1 chromosome, complete genome2-dehydro-3-deoxygluconokinase2e-25117
NC_014008:114000:129457129457130428972Coraliomargarita akajimensis DSM 45221 chromosome, complete genomePfkB domain protein1e-25117
NC_016771:4569941:4568932456893245699481017Bacillus cereus NC7401, complete genomecarbohydrate kinase, PfkB family9e-25114
NC_016779:4588000:4588771458877145897871017Bacillus cereus F837/76 chromosome, complete genomecarbohydrate kinase, PfkB family1e-24114
NC_012472:4630485:4635123463512346361391017Bacillus cereus 03BB102, complete genomecarbohydrate kinase, PfkB family1e-24114
NC_014335:4566692:4566692456669245677081017Bacillus cereus biovar anthracis str. CI chromosome, complete2-dehydro-3-deoxygluconokinase2e-24113
NC_004722:4767294:4766285476628547673101026Bacillus cereus ATCC 14579, complete genome2-dehydro-3-deoxygluconokinase4e-24112
NC_014171:4681822:4681822468182246828381017Bacillus thuringiensis BMB171 chromosome, complete genome2-dehydro-3-deoxygluconokinase4e-24112
NC_017200:4632000:4639402463940246404181017Bacillus thuringiensis serovar finitimus YBT-020 chromosome,PfkB family protein carbohydrate kinase3e-24112
NC_014041:3197192:3209017320901732100391023Zunongwangia profunda SM-A87 chromosome, complete genome2-keto-3-deoxygluconate kinase3e-24112
NC_008600:4626464:4631105463110546321301026Bacillus thuringiensis str. Al Hakam, complete genome2-dehydro-3-deoxygluconokinase8e-24111
NC_011772:4763542:4768841476884147698571017Bacillus cereus G9842, complete genomecarbohydrate kinase, PfkB family1e-23110
NC_014829:3964616:3981034398103439820351002Bacillus cellulosilyticus DSM 2522 chromosome, complete genomePfkB domain protein1e-21104
NC_009442:1158268:1169110116911011701111002Streptococcus suis 05ZYH33 chromosome, complete genomeribokinase family sugar kinase5e-1892.4
NC_015589:2447132:244713224471322448082951Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePfkB domain-containing protein3e-1789.7
NC_019978:2532640:254241625424162543366951Halobacteroides halobius DSM 5150, complete genomesugar kinase, ribokinase1e-1687.4
NC_013891:353625:358318358318359295978Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeIolC protein5e-1582.4
NC_003210:403743:408954408954409931978Listeria monocytogenes EGD-e, complete genomehypothetical protein8e-1581.6
NC_013768:418000:423224423224424201978Listeria monocytogenes 08-5923, complete genomehypothetical protein1e-1480.9
NC_013766:417991:423203423203424180978Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-1480.9
NC_013744:159861:165261165261166226966Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completePfkB domain protein1e-1480.9
NC_019978:2506472:2518086251808625191051020Halobacteroides halobius DSM 5150, complete genomesugar kinase, ribokinase2e-1480.1
NC_009328:1903291:1917116191711619181291014Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemyo-inositol catabolism protein iolC/5-dehydro-2-deoxygluconokinase2e-1480.1
NC_009725:3763922:378273937827393783731993Bacillus amyloliquefaciens FZB42, complete genomeIolC2e-1480.1
NC_014206:1618988:163702716370271637986960Geobacillus sp. C56-T3 chromosome, complete genomePfkB domain-containing protein3e-1479.7
NC_006510:1901954:1918708191870819197151008Geobacillus kaustophilus HTA426, complete genomemyo-inositol catabolism protein3e-1479.7
NC_006510:1995916:200091620009162001875960Geobacillus kaustophilus HTA426, complete genome2-keto-3-deoxy-gluconate kinase5e-1479
NC_015425:2072703:2087144208714420881601017Clostridium botulinum BKT015925 chromosome, complete genomePfkB domain-containing protein1e-1377.8
NC_019897:2696587:271954227195422720498957Thermobacillus composti KWC4 chromosome, complete genomesugar kinase1e-1377.8
NC_014650:2143033:2143033214303321440401008Geobacillus sp. Y4.1MC1 chromosome, complete genomePfkB domain-containing protein1e-1274.7
NC_020210:1908000:193004519300451930998954Geobacillus sp. GHH01, complete genome2-dehydro-3-deoxygluconokinase2e-1273.6
NC_009328:1867971:186945518694551870408954Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2-keto-3-deoxygluconate kinase4e-1272.8
NC_008261:64678:9751597515985311017Clostridium perfringens ATCC 13124, complete genomemyo-inositol catabolism protein IolC6e-1272
NC_014206:1745203:174520317452031746156954Geobacillus sp. C56-T3 chromosome, complete genomePfkB domain-containing protein9e-1271.6
NC_003888:3817000:3834741383474138357421002Streptomyces coelicolor A3(2), complete genomesugar kinase3e-1169.7
NC_014915:1880748:188581218858121886765954Geobacillus sp. Y412MC52 chromosome, complete genomePfkB domain protein8e-1168.2
NC_013411:2739989:274587427458742746827954Geobacillus sp. Y412MC61, complete genomePfkB domain protein8e-1168.2
NC_000868:643548:656671656671657588918Pyrococcus abyssi GE5, complete genomefructokinase1e-0861.2
NC_000961:1303446:130708013070801308012933Pyrococcus horikoshii OT3, complete genomefructokinase6e-0858.9
NC_014205:760428:762045762045762983939Staphylothermus hellenicus DSM 12710 chromosome, complete genomePfkB domain protein1e-0758.2
NC_008786:3915000:3935191393519139362131023Verminephrobacter eiseniae EF01-2, complete genomePfkB domain protein1e-0757.8
NC_014934:2985273:298929329892932990174882Cellulophaga algicola DSM 14237 chromosome, complete genomefructokinase3e-0653.1