Pre_GI: BLASTP Hits

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Query: NC_020134:586840:588686 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 588686, End: 589237, Length: 552

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015687:2145452:216564921656492166257609Clostridium acetobutylicum DSM 1731 chromosome, complete genomesegregation and condensation protein B6e-35146
NC_010674:2435241:245660024566002457193594Clostridium botulinum B str. Eklund 17B, complete genomesegregation and condensation protein B2e-33142
NC_010321:1177238:118023511802351180741507Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completechromosome segregation and condensation protein ScpB3e-33141
NC_010320:1585974:158669515866951587201507Thermoanaerobacter sp. X514 chromosome, complete genomeputative transcriptional regulator3e-33141
NC_014964:1169925:117242611724261172932507Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completesegregation and condensation protein B3e-33141
NC_014538:1311500:132718113271811327687507Thermoanaerobacter sp. X513 chromosome, complete genomechromosome segregation and condensation protein, ScpB3e-33141
NC_014484:1163576:119227111922711192807537Spirochaeta thermophila DSM 6192 chromosome, complete genomeputative transcriptional regulator1e-25115
NC_014032:1911500:192430519243051925051747Salinibacter ruber M8 chromosome, complete genomesegregation and condensation protein B1e-25115
NC_016148:1175999:118696911869691187553585Thermovirga lienii DSM 17291 chromosome, complete genomechromosome segregation and condensation protein ScpB3e-25114
NC_007677:1847913:186091118609111861657747Salinibacter ruber DSM 13855, complete genomesegregation and condensation protein B4e-25114
NC_014315:2177277:217897721789772179645669Nitrosococcus watsoni C-113 chromosome, complete genomechromosome segregation and condensation protein ScpB2e-24112
NC_013521:2193203:221276922127692213443675Sanguibacter keddieii DSM 10542, complete genomecondensin subunit ScpB1e-23109
NC_014654:1529500:154441615444161545072657Halanaerobium sp. 'sapolanicus' chromosome, complete genomechromosome segregation and condensation protein, ScpB1e-23108
NC_004432:32500:477854778548378594Mycoplasma penetrans HF-2, complete genomesegregation and condensation protein B8e-23106
NC_013169:1545890:156043415604341561195762Kytococcus sedentarius DSM 20547, complete genomecondensin subunit ScpB8e-23106
NC_015558:1485762:150792015079201508471552Streptococcus parauberis KCTC 11537 chromosome, complete genomesegregation and condensation protein B2e-22105
NC_013729:5497814:5514765551476555167862022Kribbella flavida DSM 17836, complete genomechromosome segregation and condensation protein, ScpB3e-22104
NC_014836:2325559:233844123384412339055615Desulfurispirillum indicum S5 chromosome, complete genomesegregation and condensation protein B5e-22103
NC_016940:470163:495932495932496501570Saprospira grandis str. Lewin chromosome, complete genomecondensin subunit scpb1e-21102
NC_014391:2579919:2581977258197725829781002Micromonospora aurantiaca ATCC 27029 chromosome, complete genomesegregation and condensation protein B1e-21102
NC_000908:253979:253979253979254602624Mycoplasma genitalium G37, complete genomesegregation and condensation protein B1e-21102
NC_018497:252374:253788253788254411624Mycoplasma genitalium M6320 chromosome, complete genomesegregation and condensation protein B1e-21102
NC_007517:2165657:218353221835322184119588Geobacter metallireducens GS-15, complete genomeputative transcriptional regulator9e-22102
NC_020133:2421965:242196524219652422672708Mycobacterium liflandii 128FXT, complete genometranscriptional regulator9e-22102
NC_015424:3112637:317430431743043174876573Aeromonas veronii B565 chromosome, complete genomeSegregation and condensation protein B4e-21100
NC_008570:3220539:327996032799603280556597Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesegregation and condensation protein B5e-21100
NC_012806:105133:122626122626123195570Mycoplasma conjunctivae, complete genomeSegregation and condensation protein B2e-1995.5
NC_013947:4695000:471914947191494719934786Stackebrandtia nassauensis DSM 44728 chromosome, complete genomechromosome segregation and condensation protein, ScpB3e-1994.7
NC_018607:2578433:258720125872012587836636Brachyspira pilosicoli B2904 chromosome, complete genomesegregation and condesation protein B3e-1891.7
NC_014330:1541874:155011415501141550749636Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative segregation and condesation protein B3e-1891.7
NC_018604:233769:241654241654242289636Brachyspira pilosicoli WesB complete genomeputative segregation and condesation protein B3e-1891.7
NC_008781:1973826:198988219898821990547666Polaromonas naphthalenivorans CJ2, complete genomeputative transcriptional regulator2e-1788.6
NC_017317:1143378:114337811433781144010633Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein9e-1786.3
NC_014253:2113233:2118468211846821195891122Methanohalobium evestigatum Z-7303 chromosome, complete genomechromosome segregation and condensation protein ScpB1e-1685.9
NC_013192:2381901:240112724011272401750624Leptotrichia buccalis DSM 1135, complete genomechromosome segregation and condensation protein, ScpB2e-1685.1
NC_016781:1039716:105182210518221052445624Corynebacterium pseudotuberculosis 3/99-5 chromosome, completesegregation and condensation protein B7e-1683.6
NC_014329:1041556:105183110518311052454624Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein7e-1683.6
NC_017031:1039548:105165410516541052277624Corynebacterium pseudotuberculosis P54B96 chromosome, completeSegregation and condensation protein B7e-1683.6
NC_017300:1045555:104930410493041049927624Corynebacterium pseudotuberculosis 1002 chromosome, completeSegregation and condensation protein B7e-1683.6
NC_017301:1037519:105146710514671052090624Corynebacterium pseudotuberculosis C231 chromosome, completeSegregation and condensation protein B7e-1683.6
NC_017303:1039562:105166810516681052291624Corynebacterium pseudotuberculosis I19 chromosome, complete genomeSegregation and condensation protein B7e-1683.6
NC_017305:1037133:104923910492391049862624Corynebacterium pseudotuberculosis PAT10 chromosome, completeSegregation and condensation protein B7e-1683.6
NC_016932:1041306:104345310434531044076624Corynebacterium pseudotuberculosis 316 chromosome, complete genomeSegregation and condensation protein B6e-1683.6
NC_014958:1268559:127515612751561275674519Deinococcus maricopensis DSM 21211 chromosome, complete genomechromosome segregation and condensation protein ScpB8e-1683.2
NC_007633:696604:714745714745715374630Mycoplasma capricolum subsp. capricolum ATCC 27343, completechromosomal segregation and condensation protein B2e-1582
NC_016783:1169821:119138611913861191940555Corynebacterium diphtheriae INCA 402 chromosome, complete genomesegregation and condensation protein B3e-1478.2
NC_013515:1483471:149930614993061499839534Streptobacillus moniliformis DSM 12112, complete genomechromosome segregation and condensation protein, ScpB2e-1271.6
NC_014002:1772060:1786572178657217876871116Methanohalophilus mahii DSM 5219 chromosome, complete genomecondensin subunit ScpB4e-1271.2
NC_007955:1566189:1573100157310015742031104Methanococcoides burtonii DSM 6242, complete genomechromosome segregation and condensation protein ScpB1e-1169.3
NC_018876:1489895:1494678149467814957811104Methanolobus psychrophilus R15 chromosome, complete genomecondensin subunit ScpB3e-1168.2
NC_015676:2099930:2105251210525121063451095Methanosalsum zhilinae DSM 4017 chromosome, complete genomechromosome segregation and condensation protein ScpB2e-0962.4
NC_000868:269923:292486292486293064579Pyrococcus abyssi GE5, complete genomehypothetical protein2e-0858.9
NC_013741:27353:318093180932303495Archaeoglobus profundus DSM 5631, complete genomechromosome segregation and condensation protein, ScpB3e-0755.1
NC_012883:636560:652229652229652807579Thermococcus sibiricus MM 739, complete genomePredicted transcription regulator, YpuH-like family3e-0754.7
NC_019977:65205:7761677616787311116Methanomethylovorans hollandica DSM 15978, complete genomesegregation and condensation protein B1e-0653.1