Pre_GI: BLASTP Hits

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Query: NC_020134:420500:445979 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 445979, End: 446923, Length: 945

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2953638:296003329600332960977945Clostridium thermocellum ATCC 27405, complete genomehypothetical protein2e-162571
NC_014376:1472304:150500715050071505972966Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein1e-88326
NC_013406:6052913:605467760546776055642966Paenibacillus sp. Y412MC10 chromosome, complete genomephage protein1e-64246
NC_018515:3411276:342670334267033427689987Desulfosporosinus meridiei DSM 13257 chromosome, complete genomePhage late control gene D protein (GPD)6e-59228
NC_017297:2531750:253685125368512537825975Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein3e-56219
NC_011830:1504497:152235715223571523328972Desulfitobacterium hafniense DCB-2, complete genomephage protein7e-56217
NC_013315:1707293:1717093171709317189701878Clostridium difficile CD196 chromosome, complete genomephage cell wall hydrolase8e-54211
NC_020291:795500:851825851825852796972Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage-like element PBSX protein XkdQ3e-52205
NC_015913:117966:147596147596148555960Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomephage cell wall hydrolase1e-50200
NC_010723:915697:927547927547928518972Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein4e-45181
NC_013517:1501276:1513713151371315148251113Sebaldella termitidis ATCC 33386, complete genomehypothetical protein2e-43176
NC_015737:143428:1562601562601582091950Clostridium sp. SY8519, complete genomehypothetical protein3e-39162
NC_010001:3614314:362092136209213621877957Clostridium phytofermentans ISDg, complete genomeputative phage cell wall hydrolase1e-36153
NC_000964:2670288:267028826702882671268981Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-2099
NC_014976:627935:655877655877656857981Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein4e-2099
UCMB5137:861734:876184876184877161978Bacillus atrophaeus UCMB-5137hypothetical protein7e-1994.7
NC_017195:1308730:131650013165001317480981Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein8e-1994.7
NC_019896:2719456:272936627293662730343978Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePhage-like element PBSX protein XkdQ9e-1994.4
NC_014976:3546884:355351035535103554487978Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein9e-1994.4
NC_000964:1330000:133894513389451339922978Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein9e-1994.4
NC_016047:1435961:144588614458861446863978Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-1894
NC_020244:1335531:134276213427621343742981Bacillus subtilis XF-1, complete genomehypothetical protein2e-1893.2
NC_016047:261304:267311267311268291981Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein3e-1892.8
NC_014479:1291500:129780712978071298784978Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein3e-1892.4
NC_009848:2755874:2760320276032027613301011Bacillus pumilus SAFR-032, complete genomehypothetical protein1e-1687.4
NC_016077:1388775:140041114004111401271861Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein1e-0861.2