Pre_GI: BLASTP Hits

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Query: NC_020134:420500:428821 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 428821, End: 429711, Length: 891

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009633:2592000:262468326246832625435753Alkaliphilus metalliredigens QYMF chromosome, complete genomeIstB ATP binding domain-containing protein2e-32139
NC_012034:2623252:262431226243122625097786Anaerocellum thermophilum DSM 6725, complete genomeAAA ATPase7e-24111
NC_006582:2944237:298280129828012983637837Bacillus clausii KSM-K16, complete genomehypothetical protein1e-23110
NC_014657:914071:915005915005915805801Caldicellulosiruptor owensensis OL chromosome, complete genomeaaa atpase5e-23108
NC_014828:541874:544887544887545720834Ethanoligenens harbinense YUAN-3 chromosome, complete genomeIstB domain protein ATP-binding protein8e-23107
NC_012563:2597934:260330226033022604105804Clostridium botulinum A2 str. Kyoto, complete genomeputative DNA replication protein DnaC3e-2099
NC_009495:2479465:251384225138422514645804Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein5e-2098.6
NC_012658:2525931:253601325360132536801789Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein1e-1790.9
NC_016077:702000:711232711232712089858Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein6e-1788.2
NC_012781:1968827:198467519846751985529855Eubacterium rectale ATCC 33656, complete genomehypothetical protein2e-1686.7
NC_015437:1494777:150757615075761508340765Selenomonas sputigena ATCC 35185 chromosome, complete genomeIstB domain protein ATP-binding protein2e-1686.7
NC_009012:2927793:293967029396702940506837Clostridium thermocellum ATCC 27405, complete genomereplicative DNA helicase2e-1686.3
NC_018870:1506918:151971615197161520501786Thermacetogenium phaeum DSM 12270 chromosome, complete genomeIstB-like ATP-binding protein4e-1685.5
NC_014650:2943975:296220929622092962997789Geobacillus sp. Y4.1MC1 chromosome, complete genomeIstB domain-containing protein ATP-binding protein2e-1583.2
NC_014314:576465:5988545988546001731320Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeIstB domain-containing protein ATP-binding protein2e-1582.8
NC_009089:478328:481742481742482593852Clostridium difficile 630, complete genomeputative DNA replication protein1e-1480.9
NC_012891:1277966:129747112974711298322852Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein2e-1480.1
NC_020272:2692746:269274626927462693546801Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein9e-1477.8
NC_014011:1139818:115524511552451156177933Aminobacterium colombiense DSM 12261 chromosome, complete genomeIstB domain protein ATP-binding protein1e-1377.4
NC_013525:1953920:195704119570411957883843Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeIstB domain protein ATP-binding protein2e-1377
NC_013170:311045:337444337444338010567Cryptobacterium curtum DSM 15641, complete genomehypothetical protein1e-1377
NC_016894:3580274:359356735935673594412846Acetobacterium woodii DSM 1030 chromosome, complete genomeputative prophage LambdaBa02 DNA replication protein DnaC23e-1375.9
NC_015214:1853106:186206018620601862971912Lactobacillus acidophilus 30SC chromosome, complete genomehypothetical protein3e-1375.9
NC_015385:2050648:205936020593602060199840Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein3e-1375.9
NC_015977:2874000:290563929056392906496858Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-1273.9
NC_008789:707916:716482716482717255774Halorhodospira halophila SL1, complete genomeIstB domain protein ATP-binding protein2e-1273.6
NC_011415:2153243:215653821565382157416879Escherichia coli SE11 chromosome, complete genomeputative phage replication protein2e-1273.2
NC_014831:8965:267112671127454744Thermaerobacter marianensis DSM 12885 chromosome, complete genomeIstB domain protein ATP-binding protein3e-1272.8
NC_013316:2033906:205772620577262058421696Clostridium difficile R20291, complete genomereplicative dna helicase4e-1272.4
NC_009253:529494:541539541539542381843Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein3e-1272.4
NC_021182:2536000:254500225450022545769768Clostridium pasteurianum BC1, complete genomeDNA replication protein7e-1271.6
NC_006177:3457637:3479451347945134804761026Symbiobacterium thermophilum IAM 14863, complete genomeDNA replication protein DnaC1e-1170.5
NC_017068:2661419:268553526855352686425891Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-1170.1
NC_020272:2748733:278901927890192789759741Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein2e-1170.1
NC_017188:2221705:223765122376512238433783Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein2e-1170.1
NC_014210:5270643:529083852908385291530693Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,IstB domain protein ATP-binding protein2e-1170.1
NC_003212:1248000:125632112563211257184864Listeria innocua Clip11262, complete genomehypothetical protein3e-1169.3
NC_011283:4212000:421836842183684219237870Klebsiella pneumoniae 342 chromosome, complete genomeATP binding protein, IstB family3e-1168.9
NC_019842:1172944:118169111816911182431741Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein8e-1167.8
UCMB5137:120656:124650124650125252603Bacillus atrophaeus UCMB-5137hypothetical protein2e-1066.6
NC_016928:1538901:156300215630021563781780Staphylococcus aureus subsp. aureus M013 chromosome, completeDNA replication protein DnaC3e-1066.2
NC_009641:327325:331185331185331964780Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein3e-1066.2
NC_009641:1105075:110940011094001110179780Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein3e-1066.2
NC_009632:921759:930716930716931495780Staphylococcus aureus subsp. aureus JH1 chromosome, completephage DnaC-like protein3e-1066.2
NC_009487:921884:930841930841931620780Staphylococcus aureus subsp. aureus JH9 chromosome, completeDNA replication protein-like protein3e-1066.2
NC_007795:2034000:206322020632202063999780Staphylococcus aureus subsp. aureus NCTC 8325, complete genomephage DnaC-like protein3e-1066.2
NC_011206:123791:126173126173127027855Acidithiobacillus ferrooxidans ATCC 53993, complete genomeIstB domain protein ATP-binding protein3e-1065.9
NC_011206:1233985:123812412381241238978855Acidithiobacillus ferrooxidans ATCC 53993, complete genomeIstB domain protein ATP-binding protein4e-1065.9
NC_017191:2223740:223968622396862240213528Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein5e-1065.5
NC_014121:1682638:168837016883701689110741Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeDNA replication protein DnaC6e-1065.1
NC_012471:719000:723433723433724137705Streptococcus equi subsp. equi 4047, complete genomeDNA replication protein9e-1064.3
NC_013450:854790:865987865987866760774Staphylococcus aureus subsp. aureus ED98, complete genomeDnaC2e-0963.5
NC_009648:1541699:155584315558431556592750Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative replication protein2e-0963.2
NC_014925:578759:592641592641593414774Staphylococcus pseudintermedius HKU10-03 chromosome, completeDNA replication protein DnaC3e-0962.4
NC_013850:2182337:219778921977892198538750Klebsiella variicola At-22 chromosome, complete genomeIstB domain protein ATP-binding protein7e-0961.6
NC_014551:576000:583573583573584544972Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein7e-0961.2
NC_016111:2932495:294058129405812941279699Streptomyces cattleya NRRL 8057, complete genomeDNA replication protein1e-0860.8
NC_016582:7033000:706203670620367062554519Streptomyces bingchenggensis BCW-1 chromosome, complete genomeIstB domain-containing protein ATP-binding protein2e-0859.7
NC_006322:1415863:143296714329671433782816Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-0858.2
NC_017167:1648913:165272716527271653611885Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1DNA replication protein-like protein7e-0858.2
NC_006270:1415001:143193914319391432919981Bacillus licheniformis ATCC 14580, complete genomehypothetical protein8e-0857.8
NC_010501:4379920:438299643829964383778783Pseudomonas putida W619, complete genomeIstB domain protein ATP-binding protein2e-0757
NC_013204:989103:1005551100555110065821032Eggerthella lenta DSM 2243, complete genomeAAA ATPase2e-0756.6
NC_014915:2963500:299504529950452995872828Geobacillus sp. Y412MC52 chromosome, complete genomeIstB domain protein ATP-binding protein3e-0755.8
NC_013411:597235:608063608063608890828Geobacillus sp. Y412MC61, complete genomeIstB domain protein ATP-binding protein3e-0755.8
NC_015275:1034230:103867210386721039493822Clostridium lentocellum DSM 5427 chromosome, complete genomehypothetical protein3e-0755.8
NC_008527:740060:741211741211742092882Lactococcus lactis subsp. cremoris SK11, complete genomeDNA replication protein9e-0754.7
NC_009782:920272:929584929584930369786Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein7e-0754.7
NC_002758:918827:928139928139928924786Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein7e-0754.7
NC_002662:447236:455606455606456490885Lactococcus lactis subsp. lactis Il1403, complete genomeDNA replication protein7e-0754.7
NC_019435:747162:748313748313749194882Lactococcus lactis subsp. cremoris UC509.9, complete genomeprimosomal protein DnaI7e-0754.7
NC_009004:1770497:178909517890951789976882Lactococcus lactis subsp. cremoris MG1363, complete genomePrimosomal protein DnaI1e-0654.3
NC_017353:887581:898332898332899117786Staphylococcus lugdunensis N920143, complete genomehypothetical ATP binding phage protein2e-0653.5
NC_020164:1677452:170457217045721705357786Staphylococcus warneri SG1, complete genomeputative ATP binding phage protein2e-0653.1
NC_003366:1:41041017831374Clostridium perfringens str. 13, complete genomechromosomal replication initiation protein5e-0652
NC_008261:1:41141117841374Clostridium perfringens ATCC 13124, complete genomechromosomal replication initiator protein DnaA5e-0652
NC_008262:1:23623616091374Clostridium perfringens SM101, complete genomechromosomal replication initiator protein DnaA5e-0652
NC_015275:1:282813681341Clostridium lentocellum DSM 5427 chromosome, complete genomechromosomal replication initiator protein DnaA7e-0651.6