Pre_GI: BLASTP Hits

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Query: NC_020134:343402:356520 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 356520, End: 357431, Length: 912

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014364:2751662:2755285275528527563911107Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeXylose isomerase domain protein TIM barrel1e-80299
NC_014652:163347:167928167928168839912Caldicellulosiruptor hydrothermalis 108 chromosome, completexylose isomerase domain protein tim barrel5e-103374
NC_015949:428923:436213436213437124912Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomexylose isomerase domain-containing protein5e-106384
NC_015949:47414:536075360754518912Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomexylose isomerase domain-containing protein5e-106384
NC_014392:2311243:231999023199902320901912Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeXylose isomerase domain-containing protein TIM barrel6e-107387
NC_014721:2043910:205195020519502052861912Caldicellulosiruptor kristjanssonii 177R1B chromosome, completexylose isomerase domain-containing protein tim barrel1e-103376
NC_014657:2236193:226189922618992262810912Caldicellulosiruptor owensensis OL chromosome, complete genomexylose isomerase domain-containing protein tim barrel3e-104378