Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:343402:354552 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 354552, End: 356357, Length: 1806

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014538:1075720:1094845109484510961341290Thermoanaerobacter sp. X513 chromosome, complete genomeCRISPR-associated protein, TM1812 family5e-67255
NC_010321:947233:9675989675989688871290Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeCRISPR-associated TM1812 family protein6e-66252
NC_014964:923681:9597919597919610801290Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeCRISPR-associated protein6e-66252
NC_014915:332784:3538873538873552271341Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein DxTHG motif protein2e-55217
NC_008554:1664131:1677254167725416785851332Syntrophobacter fumaroxidans MPOB, complete genomeCRISPR-associated protein, TM1812 family1e-52207
NC_015388:1913118:1927678192767819289551278Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeCRISPR-associated protein, TM1812 family7e-51202
NC_011899:1603500:1611114161111416124031290Halothermothrix orenii H 168, complete genomeCRISPR-associated protein, TM1812 family2e-50201
NC_013407:1205747:1205747120574712070091263Methanocaldococcus vulcanius M7, complete genomeCRISPR-associated protein, TM1812 family1e-48194
NC_015703:5013615:5029137502913750302011065Runella slithyformis DSM 19594 chromosome, complete genomeCRISPR-associated protein, TM1812 family1e-43178
NC_007503:1885571:1905956190595619073291374Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein4e-42173
NC_015562:1230532:1257048125704812583101263Methanotorris igneus Kol 5 chromosome, complete genomeCRISPR-associated protein DxTHG motif protein1e-38161
NC_016610:2489415:2505211250521125064551245Tannerella forsythia ATCC 43037 chromosome, complete genomeCRISPR-associated protein2e-38160
NC_015577:3364985:3373850337385033751721323Treponema azotonutricium ZAS-9 chromosome, complete genomeputative crispr-associated protein, family1e-36155
NC_014098:2735500:2748617274861727499121296Bacillus tusciae DSM 2912 chromosome, complete genomeCRISPR-associated protein, TM1812 family2e-34147
NC_009767:4267266:4270864427086442721141251Roseiflexus castenholzii DSM 13941, complete genomeCRISPR-associated protein, TM1812 family5e-28126
NC_014836:1108919:112874511287451129128384Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein2e-27124
NC_010321:947233:967185967185967595411Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein3e-24114
NC_014964:923681:959378959378959788411Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein3e-24114
NC_014538:1075720:109443210944321094842411Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein3e-24113
NC_015966:1316901:1336067133606713373171251Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated protein, TM1812 family2e-23111
NC_014501:5419958:5441644544164454428851242Cyanothece sp. PCC 7822 chromosome, complete genomeCRISPR-associated protein2e-23111
NC_016940:421819:4295424295424308671326Saprospira grandis str. Lewin chromosome, complete genomeCRISPR-associated protein8e-23109
NC_005230:32647:5153751537528051269Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein2e-22107
NC_015680:691457:6971956971956983881194Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated protein5e-22106
NC_008554:1664131:167685716768571677249393Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein7e-22105
NC_015388:1913118:192728519272851927674390Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehypothetical protein7e-21102
NC_008148:258292:2723452723452740571713Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated protein, TM18122e-20101
NC_014221:1786122:1800838180083818020941257Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, TM1812 family3e-20100
NC_007775:2546833:2569518256951825708371320Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein, TM1812 family1e-1688.6
NC_013926:974668:9817879817879830551269Aciduliprofundum boonei T469 chromosome, complete genomeCRISPR-associated protein, TM1812 family9e-1685.9
NC_013526:65495:7506775067763831317Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, TM1812 family1e-1585.1
NC_011420:3582500:3603701360370136053051605Rhodospirillum centenum SW, complete genomeCRISPR-associated protein, putative9e-1582.4
NC_013526:65495:7640076400777041305Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, TM1812 family9e-1272.4
NC_015577:3364985:337347633734763373874399Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein3e-1067.4
NC_011899:1603500:161076716107671611060294Halothermothrix orenii H 168, complete genomehypothetical protein1e-0965.5
NC_016940:421819:4314434314434326661224Saprospira grandis str. Lewin chromosome, complete genomeCRISPR-associated protein3e-0860.8