Pre_GI: BLASTP Hits

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Query: NC_020134:343402:352111 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 352111, End: 352971, Length: 861

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015966:1316901:133249513324951333367873Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomehypothetical protein8e-1787.8
NC_012032:3110134:312052531205253121409885Chloroflexus sp. Y-400-fl, complete genomeprotein of unknown function DUF3243e-1685.9
NC_010175:3115021:312541231254123126296885Chloroflexus aurantiacus J-10-fl, complete genomeprotein of unknown function DUF3243e-1685.9
NC_003106:5970:134401344014279840Sulfolobus tokodaii str. 7, complete genomehypothetical protein7e-1581.3
NC_007181:1856455:186740218674021868238837Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein1e-1480.5
NC_012589:598000:605251605251606087837Sulfolobus islandicus L.S.2.15, complete genomeCRISPR-associated RAMP protein, SSO1426 family2e-1480.1
NC_020134:343402:351333351333352118786Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated RAMP protein, SSO1426 family6e-1478.2
NC_015966:1316901:133159413315941332484891Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated RAMP protein6e-1478.2
NC_009523:1746725:175684817568481757732885Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein1e-1377.4
NC_015435:1010973:102605910260591026868810Metallosphaera cuprina Ar-4 chromosome, complete genomeCRISPR-associated Csx7 family protein2e-1376.6
NC_002754:1269463:127902512790251279870846Sulfolobus solfataricus P2, complete genomehypothetical protein3e-1272.8
NC_012032:3110134:311972631197263120532807Chloroflexus sp. Y-400-fl, complete genomeCRISPR-associated RAMP protein, SSO1426 family7e-1168.2
NC_010175:3115021:312461331246133125419807Chloroflexus aurantiacus J-10-fl, complete genomeCRISPR-associated RAMP protein, SSO1426 family7e-1168.2
NC_012632:913000:924051924051924797747Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated RAMP protein2e-0756.2
NC_003106:5970:127181271813446729Sulfolobus tokodaii str. 7, complete genomehypothetical protein3e-0755.8
NC_002754:1269463:127828912782891279041753Sulfolobus solfataricus P2, complete genomehypothetical protein3e-0652.8