Pre_GI: BLASTP Hits

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Query: NC_020134:343402:351333 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 351333, End: 352118, Length: 786

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009523:1746725:175603417560341756837804Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Csm3 family protein3e-29129
NC_012032:3110134:311972631197263120532807Chloroflexus sp. Y-400-fl, complete genomeCRISPR-associated RAMP protein, SSO1426 family4e-29128
NC_010175:3115021:312461331246133125419807Chloroflexus aurantiacus J-10-fl, complete genomeCRISPR-associated RAMP protein, SSO1426 family4e-29128
NC_015966:1316901:133159413315941332484891Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated RAMP protein2e-28126
NC_020134:343402:352111352111352971861Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated RAMP protein, SSO1426 family2e-1582.8
NC_012632:913000:924051924051924797747Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated RAMP protein4e-1478.6
NC_000961:135493:142867142867143742876Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1376.3
NC_011529:806000:823745823745824617873Thermococcus onnurineus NA1, complete genomehypothetical protein1e-1273.6
NC_002754:1269463:127828912782891279041753Sulfolobus solfataricus P2, complete genomehypothetical protein1e-1273.6
NC_012632:913000:923222923222924058837Sulfolobus islandicus M.16.27 chromosome, complete genomeCRISPR-associated RAMP protein2e-1272.8
NC_007181:1856455:186740218674021868238837Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein2e-1272.8
NC_007181:1856455:186824218682421868964723Sulfolobus acidocaldarius DSM 639, complete genome3e-1272.4
NC_009486:1103915:112344911234491124192744Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated RAMP Csm3 family protein5e-1168.2
NC_015435:1010973:102605910260591026868810Metallosphaera cuprina Ar-4 chromosome, complete genomeCRISPR-associated Csx7 family protein1e-1067
NC_012589:598000:605251605251606087837Sulfolobus islandicus L.S.2.15, complete genomeCRISPR-associated RAMP protein, SSO1426 family3e-1065.9
NC_016940:190986:202945202945203691747Saprospira grandis str. Lewin chromosome, complete genomeCRISPR-associated RAMP Csm3 family protein6e-1064.7
NC_002754:1269463:127902512790251279870846Sulfolobus solfataricus P2, complete genomehypothetical protein7e-1064.7
NC_014377:532816:536208536208537026819Thermosediminibacter oceani DSM 16646 chromosome, complete genomeCRISPR-associated protein, Csm3 family1e-0963.5
NC_013407:1205747:120989712098971210778882Methanocaldococcus vulcanius M7, complete genomeCRISPR-associated RAMP protein, Csm3 family2e-0963.2
NC_009718:1470972:150066315006631501391729Fervidobacterium nodosum Rt17-B1, complete genomeCRISPR-associated RAMP Csm3 family protein3e-0962.4
NC_014926:819163:828561828561829271711Thermovibrio ammonificans HB-1 chromosome, complete genomeCRISPR-associated RAMP protein, Csm3 family1e-0860.5
NC_013720:1405107:1415288141528814191063819Pirellula staleyi DSM 6068, complete genomeprotein of unknown function DUF3242e-0859.7
NC_012589:598000:604532604532605257726Sulfolobus islandicus L.S.2.15, complete genomeCRISPR-associated RAMP protein, SSO1426 family3e-0859.3
NC_000916:983500:995646995646996383738Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein4e-0858.5
NC_015388:1913118:192196319219631922811849Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeCRISPR-associated RAMP protein, Csm3 family3e-0755.5
NC_011060:2525367:253634325363432537200858Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated RAMP protein, Csm3 family4e-0755.5
NC_016610:2489415:250240925024092503047639Tannerella forsythia ATCC 43037 chromosome, complete genomeCsm3 family CRISPR-associated RAMP protein4e-0755.1