Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:301500:329146 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 329146, End: 329868, Length: 723

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015949:71474:904529045291156705Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeTraX family protein3e-23108
NC_019968:1147409:115454311545431155190648Prevotella dentalis DSM 3688 chromosome 2, complete sequenceTraX protein4e-1994.7
NC_019896:1483073:153862715386271539301675Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFimbrial assembly - like protein FimC1e-1686.7
NC_009614:4201098:422663342266334227328696Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein3e-1685.5
NC_013192:171000:192074192074192802729Leptotrichia buccalis DSM 1135, complete genomehypothetical protein1e-1584
NC_014370:885937:907856907856908497642Prevotella melaninogenica ATCC 25845 chromosome chromosome I,protein TraX2e-1583.2
NC_006582:883922:899897899897900688792Bacillus clausii KSM-K16, complete genomehypothetical protein1e-1273.2
NC_021175:1635796:165695316569531657711759Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein6e-1271.2
NC_020207:1872000:187786318778631878654792Enterococcus faecium NRRL B-2354, complete genomehypothetical protein6e-1064.7
NC_013192:232778:280339280339281118780Leptotrichia buccalis DSM 1135, complete genomeTraX family protein1e-0860.1