Pre_GI: BLASTP Hits

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Query: NC_020134:301500:314479 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 314479, End: 314895, Length: 417

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017243:349144:366513366513366929417Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein6e-63238
NC_010321:947233:950963950963951379417Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein2e-62236
NC_010320:1860801:187446318744631874879417Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein2e-62236
NC_014538:1075720:107946510794651079881417Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein2e-62236
NC_014964:923681:943156943156943572417Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein2e-62236
NC_014209:1392115:140950714095071409923417Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function UPF00475e-62236
NC_014216:1197704:122457212245721224988417Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeprotein of unknown function UPF00478e-61231
NC_018607:2375344:237882523788252379241417Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein2e-60230
NC_011978:1812000:181767918176791818098420Thermotoga neapolitana DSM 4359, complete genomehypothetical protein3e-59226
NC_013642:505518:520772520772521191420Thermotoga naphthophila RKU-10, complete genomeprotein of unknown function UPF00472e-58224
NC_014836:1180454:119302711930271193443417Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein3e-58223
NC_013939:1841890:185978018597801860199420Deferribacter desulfuricans SSM1, complete genomehypothetical protein1e-53208
NC_020453:7409402:743160974316097432028420Agromonas oligotrophica S58 DNA, complete genomehypothetical protein7e-54208
NC_014820:1057826:107650110765011076920420Cenarchaeum symbiosum A, complete genomehypothetical protein2e-51200
NC_015435:120334:123036123036123440405Metallosphaera cuprina Ar-4 chromosome, complete genomehypothetical protein2e-22103
NC_003106:2060628:207643220764322076836405Sulfolobus tokodaii str. 7, complete genomehypothetical protein1e-21101
NC_003869:2099000:209907620990762099483408Thermoanaerobacter tengcongensis MB4, complete genomehypothetical protein6e-2199.4
NC_007181:55685:607976079761201405Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein1e-1995.1
NC_015518:614806:629287629287629697411Acidianus hospitalis W1 chromosome, complete genomehypothetical protein1e-1995.1
NC_007796:1731500:175739217573921757793402Methanospirillum hungatei JF-1, complete genomeprotein of unknown function UPF00472e-1994.4
NC_012726:287637:307260307260307673414Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein4e-1993.2
NC_008818:1127575:113772611377261138136411Hyperthermus butylicus DSM 5456, complete genomeuniversally conserved protein8e-1992.4
NC_014377:669216:673432673432673842411Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function UPF00471e-1891.7
NC_010730:813534:816106816106816504399Sulfurihydrogenibium sp. YO3AOP1, complete genomeprotein of unknown function UPF00472e-1890.9
NC_015557:905145:921095921095921496402Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein of unknown function UPF00477e-1889.4
NC_020411:905335:921285921285921686402Hydrogenobaculum sp. HO, complete genomesecondary thiamine-phosphate synthase enzyme7e-1889.4
NC_015587:905255:921205921205921606402Hydrogenobaculum sp. SHO chromosome, complete genomeprotein of unknown function UPF00477e-1889.4
NC_017295:1036348:103851310385131038911399Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein3e-1787
NC_015687:1037706:103888610388861039284399Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein3e-1787
NC_003030:1037885:103906510390651039463399Clostridium acetobutylicum ATCC 824, complete genomehypothetical protein3e-1787
NC_011126:922182:936040936040936441402Hydrogenobaculum sp. Y04AAS1, complete genomeprotein of unknown function UPF00474e-1786.7
NC_015732:773143:787528787528787920393Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein7e-1785.9
NC_010628:675445:695746695746696183438Nostoc punctiforme PCC 73102, complete genomeprotein of unknown function UPF00479e-1785.5
NC_013741:27353:436554365544065411Archaeoglobus profundus DSM 5631, complete genomeprotein of unknown function UPF00471e-1684.7
NC_015391:2059191:206485920648592065281423Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein4e-1683.6
NC_015680:369777:369777369777370178402Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein8e-1682.4
NC_007681:600187:617954617954618364411Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein1e-1582
NC_019942:987134:989256989256989672417Aciduliprofundum sp. MAR08-339, complete genomesecondary thiamine-phosphate synthase enzyme1e-1581.6
NC_014654:2138794:215204221520422152443402Halanaerobium sp. 'sapolanicus' chromosome, complete genomeprotein of unknown function UPF00474e-1580.1
NC_014122:726070:741018741018741416399Methanocaldococcus infernus ME chromosome, complete genomeprotein of unknown function UPF00474e-1580.1
NC_011899:86800:883788837888776399Halothermothrix orenii H 168, complete genomehypothetical protein1e-1375.1
NC_013967:1967896:196938119693811969806426Haloferax volcanii DS2 chromosome, complete genomeconserved hypothetical protein TIGR001491e-1374.7
NC_010723:2231834:224287022428702243277408Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein1e-1374.7
NC_015389:809474:839121839121839549429Coriobacterium glomerans PW2 chromosome, complete genomeprotein of unknown function UPF00472e-1374.3
NC_009831:2884851:290056229005622900981420Shewanella sediminis HAW-EB3, complete genomeprotein of unknown function UPF00478e-1372.4
NC_017080:1194199:120858712085871209009423Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein1e-1271.6
NC_014655:2874640:287743428774342877865432Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein1e-1168.6
NC_018012:2159814:217268221726822173110429Thiocystis violascens DSM 198 chromosome, complete genomesecondary thiamine-phosphate synthase enzyme2e-1168.2
NC_008312:6869160:687112768711276871543417Trichodesmium erythraeum IMS101, complete genomeprotein of unknown function UPF00471e-1168.2
NC_015499:309394:323585323585323986402Thermodesulfobium narugense DSM 14796 chromosome, complete genomeprotein of unknown function UPF00471e-1168.2
NC_014363:1605349:161274216127421613170429Olsenella uli DSM 7084 chromosome, complete genomeprotein of unknown function UPF00471e-1168.2
NC_014374:1072218:114161311416131142023411Acidilobus saccharovorans 345-15 chromosome, complete genomehypothetical protein2e-1167.8
NC_015703:5649260:565141456514145651836423Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein3e-1167
NC_013421:4006085:402951440295144029933420Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function UPF00476e-1166.2
NC_015844:3524175:352548935254893525911423Zobellia galactanivorans, complete genomehypothetical protein2e-1064.7
NC_007604:41495:766147661477063450Synechococcus elongatus PCC 7942, complete genomehypothetical protein2e-1064.7
NC_016112:562570:566433566433566864432Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein2e-1064.3
NC_014472:294775:312976312976313398423Flavobacteriales bacterium HTCC2170 chromosome, complete genomehypothetical protein3e-1063.5
NC_018080:6048516:605024060502406050665426Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-1063.2
NC_010552:196457:212027212027212446420Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function UPF00478e-1062.4
NC_009078:74954:957469574696165420Burkholderia pseudomallei 1106a chromosome II, complete sequencehypothetical protein2e-0961.6
NC_007435:1914375:193482419348241935243420Burkholderia pseudomallei 1710b chromosome II, complete sequenceconserved hypothetical protein TIGR001492e-0961.6
NC_009075:92210:115628115628116047420Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein2e-0961.6
NC_006351:73000:963029630296721420Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-0961.6
NC_016609:5890292:592796459279645928386423Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein2e-0961.6
NC_016830:6589575:659462665946266595051426Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein1e-0961.6
NC_014532:2298628:231272923127292313148420Halomonas elongata DSM 2581, complete genomehypothetical protein2e-0960.8
NC_008319:787881:803842803842804501660Synechococcus sp. CC9311, complete genomehypothetical protein2e-0858.2
NC_020209:4549563:455460745546074555032426Pseudomonas poae RE*1-1-14, complete genomesecondary thiamine-phosphate synthase enzyme5e-0856.6
NC_015565:2827444:284671628467162847180465Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein1e-0755.1
NC_013061:2775623:279673527967352797157423Pedobacter heparinus DSM 2366, complete genomeprotein of unknown function UPF00472e-0754.7
NC_020181:3585898:361778336177833618199417Enterobacter aerogenes EA1509E, complete genomeFIG00638366: hypothetical protein4e-0753.5
NC_012125:4400636:440147844014784401894417Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-0649.7
NC_016857:4491976:449281844928184493234417Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein5e-0649.7
NC_016856:4482845:448506744850674485483417Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein5e-0649.7
NC_016832:4288980:428982242898224290238417Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-0649.7
NC_016810:4491975:449281744928174493233417Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-0649.7
NC_011147:4221000:422198442219844222400417Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-0649.7
NC_010102:4396500:439748143974814397897417Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0649.7
NC_004631:4300457:430129943012994301715417Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-0649.7
NC_003198:4315807:431664943166494317065417Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-0649.7
NC_006511:4225455:422629742262974226713417Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-0649.7
NC_016860:4575772:457661445766144577030417Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-0649.7
NC_016863:4431831:443267344326734433089417Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein5e-0649.7
NC_011294:4327904:432874643287464329162417Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-0649.7
NC_011274:4305812:430665443066544307070417Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-0649.7
NC_011205:4486142:448698444869844487400417Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-0649.7
NC_011094:4361238:436208043620804362496417Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-0649.7
NC_012912:777592:794703794703795122420Dickeya zeae Ech1591, complete genomeprotein of unknown function UPF00475e-0649.7
NC_011083:4466634:446747644674764467892417Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-0649.7
NC_006905:4405301:440614344061434406559417Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein5e-0649.7
NC_011080:4461851:446269344626934463109417Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-0649.7
NC_017046:4490500:449147844914784491894417Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein5e-0649.7
NC_003197:4470683:447152544715254471941417Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein5e-0649.7