Pre_GI: BLASTP Hits

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Query: NC_020134:2801199:2806980 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2806980, End: 2807510, Length: 531

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014376:4048728:404872840487284049264537Clostridium saccharolyticum WM1 chromosome, complete genomeribosomal protein L172e-33141
NC_010001:4486170:448916244891624489698537Clostridium phytofermentans ISDg, complete genomeribosomal protein L178e-31132
NC_012563:3956500:395993539599353960276342Clostridium botulinum A2 str. Kyoto, complete genomeribosomal protein L176e-22103
NC_010516:3759136:376302437630243763365342Clostridium botulinum B1 str. Okra, complete genomeribosomal protein L176e-22103
NC_009495:3688138:369202636920263692367342Clostridium botulinum A str. ATCC 3502 chromosome, complete genome50S ribosomal protein L176e-22103
NC_009697:3659834:366801536680153668356342Clostridium botulinum A str. ATCC 19397 chromosome, complete50S ribosomal protein L176e-22103
NC_009698:3553365:356512435651243565465342Clostridium botulinum A str. Hall chromosome, complete genome50S ribosomal protein L176e-22103
NC_009699:3790917:379480537948053795146342Clostridium botulinum F str. Langeland chromosome, complete genome50S ribosomal protein L176e-22103
NC_012658:3778822:378271037827103783051342Clostridium botulinum Ba4 str. 657 chromosome, complete genome50S ribosomal protein L176e-22103
NC_017297:3787191:379341937934193793760342Clostridium botulinum F str. 230613 chromosome, complete genome50S ribosomal protein L176e-22103
NC_010520:3788702:379259037925903792931342Clostridium botulinum A3 str. Loch Maree, complete genomeribosomal protein L171e-21102
NC_003366:2731995:273681927368192737160342Clostridium perfringens str. 13, complete genome50S ribosomal protein L173e-21101
NC_008261:2957354:295946429594642959805342Clostridium perfringens ATCC 13124, complete genomeribosomal protein L173e-21101
NC_008262:2598920:260185226018522602193342Clostridium perfringens SM101, complete genomeribosomal protein L173e-21101
NC_015555:327562:367761367761368099339Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete50S ribosomal protein L171e-1995.9
NC_003030:3251941:325451232545123254856345Clostridium acetobutylicum ATCC 824, complete genome50S ribosomal protein L172e-1995.5
NC_015687:3252233:325613932561393256483345Clostridium acetobutylicum DSM 1731 chromosome, complete genome50S ribosomal protein L172e-1995.5
NC_017295:3250451:325376932537693254113345Clostridium acetobutylicum EA 2018 chromosome, complete genome50S ribosomal protein L172e-1995.5
NC_014393:4482896:448685244868524487193342Clostridium cellulovorans 743B chromosome, complete genome50S ribosomal protein L176e-1993.6
NC_014328:4387303:443110444311044431445342Clostridium ljungdahlii ATCC 49587 chromosome, complete genome50S ribosomal protein L177e-1993.2
NC_014624:3741764:374440037444003744741342Eubacterium limosum KIST612 chromosome, complete genome50S ribosomal protein L177e-1993.2
NC_004557:2711702:273249627324962732837342Clostridium tetani E88, complete genome50S ribosomal protein L171e-1892.8
NC_010723:223935:266774266774267115342Clostridium botulinum E3 str. Alaska E43, complete genomeribosomal protein L171e-1892.4
NC_011999:198769:217159217159217527369Macrococcus caseolyticus JCSC5402, complete genome50S ribosomal protein L172e-1892
NC_013171:1677543:168217116821711682512342Anaerococcus prevotii DSM 20548, complete genomeribosomal protein L172e-1892
NC_018664:2357882:235969923596992360040342Clostridium acidurici 9a chromosome, complete genome50S ribosomal protein L173e-1891.3
NC_021182:4557608:456100045610004561341342Clostridium pasteurianum BC1, complete genomeribosomal protein L173e-1788.2
NC_012121:1728913:173254217325421732910369Staphylococcus carnosus subsp. carnosus TM300, complete genome50S ribosomal protein L174e-1787.4
NC_015759:536929:540883540883541269387Weissella koreensis KACC 15510 chromosome, complete genome50S ribosomal protein L175e-1683.6
NC_019970:336472:399070399070399408339Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosomal protein L171e-1582.4
NC_004193:119737:155464155464155817354Oceanobacillus iheyensis HTE831, complete genome50S ribosomal protein L171e-1582.4
NC_013921:1977444:199670419967041997042339Thermoanaerobacter italicus Ab9 chromosome, complete genomeribosomal protein L171e-1582.4
NC_014410:403776:443951443951444289339Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,ribosomal protein L171e-1582.4
NC_015958:2251619:227988222798822280220339Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome50S ribosomal protein L171e-1582.4
NC_014964:388458:428971428971429309339Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete50S ribosomal protein L171e-1582.4
NC_010320:918532:919493919493919831339Thermoanaerobacter sp. X514 chromosome, complete genome50S ribosomal protein L171e-1582.4
NC_010321:429720:433555433555433893339Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, complete50S ribosomal protein L171e-1582.4
NC_014209:1910109:192937719293771929715339Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,ribosomal protein L172e-1581.6
NC_014377:112992:142334142334142666333Thermosediminibacter oceani DSM 16646 chromosome, complete genomeLSU ribosomal protein L17P4e-1580.9
NC_017208:108134:144219144219144581363Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete50S ribosomal protein L179e-1579.7
NC_014171:109280:142171142171142533363Bacillus thuringiensis BMB171 chromosome, complete genome50S ribosomal protein L179e-1579.7
NC_016584:233486:252019252019252357339Desulfosporosinus orientis DSM 765 chromosome, complete genome50S ribosomal protein L171e-1479.3
NC_004461:1849176:185347418534741853842369Staphylococcus epidermidis ATCC 12228, complete genome50S ribosomal protein L171e-1479.3
NC_002976:1844901:184850118485011848869369Staphylococcus epidermidis RP62A, complete genomeribosomal protein L171e-1479.3
NC_014829:133305:171127171127171489363Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribosomal protein L174e-1477.8
NC_020995:245671:266301266301266681381Enterococcus casseliflavus EC20, complete genome50S ribosomal protein L176e-1477
NC_007929:1463295:148247114824711482854384Lactobacillus salivarius subsp. salivarius UCC118, complete genomeLSU ribosomal protein L17P6e-1477
NC_014484:591291:602352602352602795444Spirochaeta thermophila DSM 6192 chromosome, complete genome50S ribosomal protein L179e-1476.3
NC_015391:2523451:253471225347122535092381Carnobacterium sp. 17-4 chromosome, complete genome50S ribosomal protein L171e-1376.3
NC_010718:193231:235004235004235345342Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLSU ribosomal protein L17P1e-1375.9
NC_010376:186510:192967192967193362396Finegoldia magna ATCC 29328, complete genome50S ribosomal protein L172e-1375.5
NC_014720:1140765:115959611595961159937342Caldicellulosiruptor kronotskyensis 2002 chromosome, completeribosomal protein l173e-1374.7
NC_019978:178277:212421212421212762342Halobacteroides halobius DSM 5150, complete genomeribosomal protein L172e-1374.7
NC_013316:120759:121727121727122068342Clostridium difficile R20291, complete genome50S ribosomal protein L174e-1373.9
NC_009089:117980:117980117980118321342Clostridium difficile 630, complete genome50S ribosomal protein L174e-1373.9
NC_009437:2367842:239039723903972390738342Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeribosomal protein L176e-1373.6
NC_016629:2449731:246182324618232462260438Desulfovibrio africanus str. Walvis Bay chromosome, complete50S ribosomal protein L171e-1272.8
NC_014721:1777644:179960017996001799941342Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeribosomal protein l179e-1372.8
NC_015949:1180755:120258712025871202928342Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome50S ribosomal protein L179e-1372.8
NC_012034:1783912:180587118058711806212342Anaerocellum thermophilum DSM 6725, complete genomeribosomal protein L179e-1372.8
NC_014652:1032711:105222910522291052570342Caldicellulosiruptor hydrothermalis 108 chromosome, completeribosomal protein l179e-1372.8
NC_013928:1828099:184225818422581842644387Streptococcus mutans NN2025, complete genome50S ribosomal protein L171e-1272.4
NC_015516:131564:151105151105151485381Melissococcus plutonius ATCC 35311, complete genome50S ribosomal protein L17p2e-1272
NC_016938:136331:152985152985153365381Melissococcus plutonius DAT561 chromosome 1, complete genome50S ribosomal protein L17p2e-1271.6
NC_017098:652681:671656671656672189534Spirochaeta africana DSM 8902 chromosome, complete genome50S ribosomal protein L173e-1271.2
NC_014657:1540500:154082015408201541161342Caldicellulosiruptor owensensis OL chromosome, complete genomeribosomal protein l174e-1270.9
NC_014392:969498:988322988322988663342Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeribosomal protein L174e-1270.9
NC_015519:197836:228421228421228753333Tepidanaerobacter sp. Re1 chromosome, complete genome50S ribosomal protein L174e-1270.9
NC_013173:3132517:313826031382603138676417Desulfomicrobium baculatum DSM 4028, complete genomeribosomal protein L174e-1270.9
NC_012673:1540000:156117415611741561527354Exiguobacterium sp. AT1b, complete genomeribosomal protein L174e-1167.4
NC_010572:3314500:331820733182073318734528Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative 50S ribosomal protein L171e-1066.2
NC_013893:830282:849390849390849758369Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeLSU ribosomal protein L17p1e-1066.2
NC_017353:825856:844964844964845332369Staphylococcus lugdunensis N920143, complete genome50S ribosomal protein L171e-1066.2
NC_020164:701151:721229721229721597369Staphylococcus warneri SG1, complete genome50S ribosomal protein L171e-1066.2
NC_014165:597000:644409644409644981573Thermobispora bispora DSM 43833 chromosome, complete genome50S ribosomal protein L179e-1166.2
NC_002952:2390668:239367323936732394041369Staphylococcus aureus subsp. aureus MRSA252, complete genome50S ribosomal protein L171e-1065.9
NC_007793:2352953:235743823574382357806369Staphylococcus aureus subsp. aureus USA300, complete genome50S ribosomal protein L171e-1065.9
NC_003923:2301234:230613123061312306499369Staphylococcus aureus subsp. aureus MW2, complete genome50S ribosomal protein L171e-1065.9
NC_002745:2289829:229472622947262295094369Staphylococcus aureus subsp. aureus N315, complete genome50S ribosomal protein L171e-1065.9
NC_002951:2288674:229357122935712293939369Staphylococcus aureus subsp. aureus COL, complete genomeribosomal protein L171e-1065.9
NC_009782:2362000:236586423658642366232369Staphylococcus aureus subsp. aureus Mu3, complete genome50S ribosomal protein L171e-1065.9
NC_002953:2282236:228523622852362285604369Staphylococcus aureus subsp. aureus MSSA476, complete genome50S ribosomal protein L171e-1065.9
NC_002758:2359329:236422623642262364594369Staphylococcus aureus subsp. aureus Mu50, complete genome50S ribosomal protein L171e-1065.9
NC_007795:2299327:230422423042242304592369Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeribosomal protein L171e-1065.9
NC_010079:2352691:235758823575882357956369Staphylococcus aureus subsp. aureus USA300_TCH1516, completeribosomal protein L171e-1065.9
NC_007622:2239799:224469422446942245062369Staphylococcus aureus RF122, complete genome50S ribosomal protein L171e-1065.9
NC_009487:2390713:239452123945212394889369Staphylococcus aureus subsp. aureus JH9 chromosome, complete50S ribosomal protein L171e-1065.9
NC_009632:2391397:239439723943972394765369Staphylococcus aureus subsp. aureus JH1 chromosome, complete50S ribosomal protein L171e-1065.9
NC_009641:2357468:236195323619532362321369Staphylococcus aureus subsp. aureus str. Newman chromosome,50S ribosomal protein L171e-1065.9
NC_017351:2335753:234065123406512341019369Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete50S ribosomal protein L171e-1065.9
NC_017347:2350802:235569923556992356067369Staphylococcus aureus subsp. aureus T0131 chromosome, complete50S ribosomal protein L171e-1065.9
NC_017343:2212780:221767722176772218045369Staphylococcus aureus subsp. aureus ECT-R 2, complete genome50S ribosomal protein L171e-1065.9
NC_017342:1012555:103273210327321033100369Staphylococcus aureus subsp. aureus TCH60 chromosome, complete50S ribosomal protein L171e-1065.9
NC_017341:2384736:238963323896332390001369Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,50S ribosomal protein L171e-1065.9
NC_017338:2296906:230071423007142301082369Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete50S ribosomal protein L171e-1065.9
NC_017337:2319847:232433123243312324699369Staphylococcus aureus subsp. aureus ED133 chromosome, complete50S ribosomal protein L171e-1065.9
NC_016941:2234937:223937622393762239744369Staphylococcus aureus subsp. aureus MSHR1132, complete genome50S ribosomal protein L171e-1065.9
NC_016928:2249907:225438722543872254755369Staphylococcus aureus subsp. aureus M013 chromosome, complete50S ribosomal protein L171e-1065.9
NC_016912:2170615:217551221755122175880369Staphylococcus aureus subsp. aureus VC40 chromosome, complete50S ribosomal protein L171e-1065.9
NC_013450:2306431:231091623109162311284369Staphylococcus aureus subsp. aureus ED98, complete genome50S ribosomal protein L171e-1065.9
NC_007168:813957:832962832962833333372Staphylococcus haemolyticus JCSC1435, complete genome50S ribosomal protein L172e-1065.5
NC_016114:2960989:296469329646932965199507Streptomyces flavogriseus ATCC 33331 chromosome, complete genome50S ribosomal protein L172e-1065.1
NC_016751:857359:861240861240861650411Marinitoga piezophila KA3 chromosome, complete genome50S ribosomal protein L172e-1065.1
NC_015953:4385419:442111944211194421625507Streptomyces sp. SirexAA-E chromosome, complete genome50S ribosomal protein L173e-1064.7
NC_007517:687276:714423714423714959537Geobacter metallireducens GS-15, complete genomeribosomal protein L173e-1064.7
NC_018750:4728870:475067147506714751135465Streptomyces venezuelae ATCC 10712, complete genomeLSU ribosomal protein L17p3e-1064.7
NC_007716:517356:518258518258518614357Aster yellows witches'-broom phytoplasma AYWB, complete genomeLSU ribosomal protein L17P5e-1063.9
NC_007350:692041:712225712225712593369Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,50S ribosomal protein L176e-1063.5
NC_005072:1458799:147469714746971475047351Prochlorococcus marinus subsp. pastoris str. CCMP1986, complete50S ribosomal protein L171e-0962.4
NC_010546:4144449:416345441634544163804351Cyanothece sp. ATCC 51142 chromosome circular, complete sequence50S ribosomal protein L172e-0962
NC_006360:221345:243812243812244174363Mycoplasma hyopneumoniae 232, complete genome50S ribosomal protein L172e-0962
NC_019771:4459000:447829544782954478645351Anabaena cylindrica PCC 7122, complete genome50S ribosomal protein L172e-0961.6
NC_012806:105133:142248142248142610363Mycoplasma conjunctivae, complete genome50S ribosomal protein L176e-0960.5
NC_008820:2027977:204708220470822047432351Prochlorococcus marinus str. MIT 9303, complete genome50S ribosomal protein L179e-0959.7
NC_009718:1207360:120873312087331209116384Fervidobacterium nodosum Rt17-B1, complete genomeribosomal protein L171e-0859.3
NC_017096:1081904:108271710827171083073357Caldisericum exile AZM16c01, complete genome50S ribosomal protein L171e-0859.3
NC_009616:979861:100296110029611003344384Thermosipho melanesiensis BI429 chromosome, complete genome50S ribosomal protein L172e-0858.9
NC_011653:1226035:125014912501491250532384Thermosipho africanus TCF52B, complete genomeribosomal protein L172e-0858.5
NC_017955:4888990:489098448909844891778795Modestobacter marinus, complete genome50S ribosomal protein L172e-0858.2
NC_008609:708886:736762736762737145384Pelobacter propionicus DSM 2379, complete genomeribosomal protein L174e-0857.8
NC_008312:4643190:464319046431904643540351Trichodesmium erythraeum IMS101, complete genomeribosomal protein L176e-0857
NC_017095:1429298:143538714353871435773387Fervidobacterium pennivorans DSM 9078 chromosome, complete genome50S ribosomal protein L178e-0856.6
NC_007516:347824:364687364687365037351Synechococcus sp. CC9605, complete genome50S ribosomal protein L178e-0856.6
NC_011296:1365998:136962713696271370028402Thermodesulfovibrio yellowstonii DSM 11347, complete genomeribosomal protein L178e-0856.6
NC_010814:1390817:140952914095291409903375Geobacter lovleyi SZ, complete genomeribosomal protein L178e-0856.6
NC_015682:736746:760834760834761334501Thermodesulfobacterium sp. OPB45 chromosome, complete genome50S ribosomal protein L171e-0755.8
NC_015957:690817:705190705190705741552Streptomyces violaceusniger Tu 4113 chromosome, complete genome50S ribosomal protein L171e-0755.8
NC_015707:705628:715543715543715929387Thermotoga thermarum DSM 5069 chromosome, complete genome50S ribosomal protein L17P2e-0755.5
NC_014727:368698:369660369660370043384Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,50S ribosomal protein l172e-0755.5
NC_013757:4707960:470834047083404709029690Geodermatophilus obscurus DSM 43160, complete genomeribosomal protein L173e-0754.7
NC_014774:1120383:113123511312351131576342Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete50S ribosomal protein L174e-0754.3
NC_014921:777047:781008781008781481474Mycoplasma fermentans M64 chromosome, complete genome50S ribosomal protein l175e-0753.9
NC_011726:213956:219615219615219965351Cyanothece sp. PCC 8801, complete genomeribosomal protein L177e-0753.5
NC_013161:212941:218600218600218950351Cyanothece sp. PCC 8802, complete genomeribosomal protein L177e-0753.5
NC_004668:191732:212357212357212740384Enterococcus faecalis V583, complete genomeribosomal protein L176e-0753.5
NC_017316:157254:177324177324177707384Enterococcus faecalis OG1RF chromosome, complete genome50S ribosomal protein L176e-0753.5
NC_013771:1171251:118977611897761190126351Cyanobacterium UCYN-A, complete genomeLSU ribosomal protein L17P6e-0753.5
NC_009091:1423677:145925314592531459603351Prochlorococcus marinus str. MIT 9301, complete genome50S ribosomal protein L173e-0651.6
NC_018645:4049831:405343740534374053793357Desulfobacula toluolica Tol2, complete genome50S ribosomal protein L17 RplQ2e-0651.6
NC_009840:1485383:155610915561091556459351Prochlorococcus marinus str. MIT 9215, complete genome50S ribosomal protein L173e-0651.2
NC_008816:1476209:148559914855991485949351Prochlorococcus marinus str. AS9601, complete genome50S ribosomal protein L173e-0651.2
NC_007577:1517000:152588315258831526233351Prochlorococcus marinus str. MIT 9312, complete genomeribosomal protein L173e-0651.2
NC_002939:3108907:311455631145563115083528Geobacter sulfurreducens PCA, complete genomeribosomal protein L174e-0650.8
NC_011026:1284966:130859213085921309101510Chloroherpeton thalassium ATCC 35110, complete genomeribosomal protein L174e-0650.8
NC_010831:2448070:245176524517652452265501Chlorobium phaeobacteroides BS1, complete genomeribosomal protein L177e-0650.1
NC_013223:2337049:233931823393182339716399Desulfohalobium retbaense DSM 5692, complete genomeribosomal protein L178e-0649.7
NC_013517:4208939:421255542125554212905351Sebaldella termitidis ATCC 33386, complete genomeribosomal protein L179e-0649.7