Pre_GI: BLASTP Hits

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Query: NC_020134:2772500:2783624 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2783624, End: 2784049, Length: 426

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2661795:267420426742042674647444Clostridium thermocellum ATCC 27405, complete genomeregulatory protein, MerR5e-24109
NC_009922:2721343:273038727303872730812426Alkaliphilus oremlandii OhILAs, complete genomeconserved hypothetical protein5e-2199.8
NC_009633:760872:772340772340772753414Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar protein1e-2098.6
NC_018664:239000:246368246368246793426Clostridium acidurici 9a chromosome, complete genomeflagellar operon protein YvyF3e-2097.1
NC_019978:2260395:227905322790532279451399Halobacteroides halobius DSM 5150, complete genomeflagellar operon protein TIGR038262e-1787.4
NC_013205:2610956:264971726497172650145429Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,hypothetical protein6e-1682.8
NC_006510:3133965:315953231595323159942411Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-1374.3
NC_014915:3259440:328527732852773285687411Geobacillus sp. Y412MC52 chromosome, complete genomeFlagellar operon protein YvyF3e-1373.9
NC_014829:3877701:388736938873693887800432Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeFlagellar operon protein YvyF7e-1372.8
NC_013406:6568273:658888465888846589294411Paenibacillus sp. Y412MC10 chromosome, complete genomeflagellar protein1e-1271.6
NC_011567:2556915:256142525614252561835411Anoxybacillus flavithermus WK1, complete genomeUncharacterized membrane protein2e-1270.9
NC_019897:128610:173629173629174045417Thermobacillus composti KWC4 chromosome, complete genomeflagellar operon protein3e-1270.5
NC_012793:3035978:304785630478563048263408Geobacillus sp. WCH70, complete genomeflagellar protein8e-1269.3
NC_016047:3599095:359993835999383600357420Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein9e-1268.9
NC_017195:3426000:343955134395513439970420Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYvyF4e-1167
NC_019896:577594:583948583948584367420Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein4e-1167
NC_016641:945284:956527956527956937411Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-1065.1
NC_016935:75186:9977899778100191414Paenibacillus mucilaginosus 3016 chromosome, complete genomeflagellar protein5e-1063.2
NC_015690:75223:9974599745100158414Paenibacillus mucilaginosus KNP414 chromosome, complete genomeflagellar protein5e-1063.2
NC_012914:6583000:660696666069666607385420Paenibacillus sp. JDR-2, complete genomeflagellar protein2e-0961.6
NC_004193:2553630:256609625660962566509414Oceanobacillus iheyensis HTE831, complete genomeflagellar protein3e-0857.4