Pre_GI: BLASTP Hits

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Query: NC_020134:2772500:2777320 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2777320, End: 2777766, Length: 447

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:2661795:266792926679292668408480Clostridium thermocellum ATCC 27405, complete genomeprotein of unknown function DUF1802e-29127
NC_014652:1091610:109384810938481094306459Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein2e-24110
NC_014378:261064:261640261640262074435Acetohalobium arabaticum DSM 5501 chromosome, complete genomeprotein of unknown function DUF1806e-24109
NC_014650:376070:377608377608378051444Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein4e-22103
NC_009633:760872:776959776959777447489Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar assembly protein FliW2e-21101
NC_017297:2905138:291250429125042912935432Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein6e-2199.4
NC_009699:2901497:291236629123662912797432Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar assembly protein FliW6e-2199.4
NC_012563:3090954:310283231028323103263432Clostridium botulinum A2 str. Kyoto, complete genomeflagellar assembly factor FliW1e-2099
NC_009495:2876865:288874328887432889174432Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar assembly protein FliW1e-2099
NC_009697:2790277:280215528021552802586432Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar assembly protein FliW1e-2099
NC_009698:2727203:273908127390812739512432Clostridium botulinum A str. Hall chromosome, complete genomeflagellar assembly protein FliW1e-2099
NC_010520:2937981:294818429481842948615432Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein9e-2199
NC_019978:2260395:227441322744132274883471Halobacteroides halobius DSM 5150, complete genomehypothetical protein1e-2098.6
NC_012658:2930244:294033929403392940770432Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar assembly protein FliW3e-2097.4
NC_010516:2900057:290782729078272908258432Clostridium botulinum B1 str. Okra, complete genomehypothetical protein3e-2097.4
NC_007503:861668:862866862866863330465Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein3e-2097.4
NC_004557:1826977:183366018336601834139480Clostridium tetani E88, complete genomehypothetical protein8e-2095.9
NC_010718:2337209:237104123710412371496456Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF1801e-1995.5
NC_007759:1356439:137862513786251379101477Syntrophus aciditrophicus SB, complete genometransmembrane protein2e-1994.7
NC_004193:2553630:256178525617852562228444Oceanobacillus iheyensis HTE831, complete genomehypothetical protein5e-1993.2
NC_021182:2921000:293247229324722932897426Clostridium pasteurianum BC1, complete genomehypothetical protein7e-1992.8
NC_019897:128610:178074178074178511438Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein1e-1892
NC_014387:605711:618518618518618976459Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflagellar assembly protein FliW1e-1892
NC_018664:239000:253427253427253876450Clostridium acidurici 9a chromosome, complete genomeflagellar assembly factor FliW2e-1891.7
NC_014915:3259440:328090232809023281336435Geobacillus sp. Y412MC52 chromosome, complete genomeprotein of unknown function DUF1803e-1890.5
NC_015660:391627:393182393182393625444Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar assembly factor fliW7e-1889.4
NC_007644:779376:786307786307786783477Moorella thermoacetica ATCC 39073, complete genomeProtein of unknown function DUF1801e-1788.6
NC_017295:2286911:230091323009132301338426Clostridium acetobutylicum EA 2018 chromosome, complete genomeflagellar assembly protein FliW2e-1787.8
NC_012793:3035978:304137830413783041812435Geobacillus sp. WCH70, complete genomeprotein of unknown function DUF1802e-1787.4
NC_015425:1207314:121743312174331217864432Clostridium botulinum BKT015925 chromosome, complete genomeflagellar assembly factor FliW4e-1787
NC_006510:3133965:315514531551453155579435Geobacillus kaustophilus HTA426, complete genomehypothetical protein7e-1785.9
NC_014328:1046958:106425810642581064689432Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein7e-1785.9
NC_019896:577594:588304588304588735432Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein7e-1785.9
NC_017195:3426000:343518334351833435614432Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein7e-1785.9
NC_012108:4118888:414818341481834148611429Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein9e-1785.5
NC_007517:480303:485366485366485827462Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF1801e-1685.5
NC_014829:3877701:388184938818493882304456Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeprotein of unknown function DUF1802e-1581.6
NC_013522:698114:704193704193704672480Thermanaerovibrio acidaminovorans DSM 6589, complete genomeprotein of unknown function DUF1802e-1581.3
NC_013791:1082951:109956510995651100008444Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar assembly protein FliW2e-1581.3
NC_011567:2556915:255717625571762557613438Anoxybacillus flavithermus WK1, complete genomehypothetical protein4e-1580.5
NC_020291:4944835:498842049884204988845426Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar assembly factor FliW7e-1579.3
NC_010723:801215:806595806595807020426Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar assembly factor FliW2e-1477.8
NC_010337:748467:770172770172770633462Heliobacterium modesticaldum Ice1, complete genomehypothetical protein3e-1477.4
NC_009617:4946000:495058249505824951007426Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar assembly protein FliW1e-1375.5
NC_016616:2699350:270207827020782702518441Dechlorosoma suillum PS chromosome, complete genomehypothetical protein1e-1375.5
NC_011899:1807365:182785218278521828322471Halothermothrix orenii H 168, complete genomehypothetical protein2e-1374.7
NC_015589:1240197:126240512624051262827423Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehypothetical protein9e-1372.4
NC_010674:828191:829417829417829842426Clostridium botulinum B str. Eklund 17B, complete genomeflagellar assembly factor FliW1e-1272
NC_011653:466007:477031477031477468438Thermosipho africanus TCF52B, complete genometransmembrane protein7e-1269.3
NC_015565:1920329:192528219252821925704423Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeFlagellar assembly factor fliW2e-1168.2
NC_013223:724394:725582725582726046465Desulfohalobium retbaense DSM 5692, complete genomeprotein of unknown function DUF1804e-1166.6
NC_008011:924392:933304933304933993690Lawsonia intracellularis PHE/MN1-00, complete genomehypothetical protein5e-1166.6
NC_016641:945284:952486952486952932447Paenibacillus terrae HPL-003 chromosome, complete genomeflagellar assembly protein FliW6e-1166.2
NC_016012:561687:570687570687571094408Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar assembly factor FliW1e-0962.4
NC_015913:624859:631074631074631481408Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar assembly protein FliW9e-1062.4
NC_013406:6568273:658442865844286584850423Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein3e-0960.5
NC_012914:6583000:660244866024486602828381Paenibacillus sp. JDR-2, complete genomeprotein of unknown function DUF1805e-0959.7
NC_009253:2615777:263449226344922634902411Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein2e-0857.8
NC_009454:2201987:220461622046162205038423Pelotomaculum thermopropionicum SI, complete genomeflagellar assembly protein FliW5e-0856.6
NC_014394:1989418:200679120067912007270480Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein2e-0754.3
NC_014098:3030274:305011430501143050554441Bacillus tusciae DSM 2912 chromosome, complete genomeprotein of unknown function DUF1801e-0652