Pre_GI: BLASTP Hits

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Query: NC_020134:2772500:2772942 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2772942, End: 2774909, Length: 1968

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016584:4363382:4375937437593743778321896Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar capping protein1e-106387
NC_015172:1075592:1086694108669410885951902Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein1e-94348
NC_015519:924000:9282699282699301281860Tepidanaerobacter sp. Re1 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein2e-72273
NC_014377:1546124:1558623155862315605421920Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar hook-associated 2 domain protein3e-72273
NC_015589:1240197:1259615125961512621192505Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein2e-67257
NC_010520:2937981:2944323294432329467582436Clostridium botulinum A3 str. Loch Maree, complete genomeFlagellar hook-associated protein 21e-64248
NC_009698:2727203:2735222273522227376572436Clostridium botulinum A str. Hall chromosome, complete genomeflagellar hook-associated protein 22e-62240
NC_009697:2790277:2798296279829628007312436Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar hook-associated protein 22e-62240
NC_009495:2876865:2884884288488428873192436Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar hook-associated protein 22e-62240
NC_012563:3090954:3098973309897331014082436Clostridium botulinum A2 str. Kyoto, complete genomeFlagellar hook-associated protein 22e-62240
NC_012658:2930244:2936480293648029389152436Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar hook-associated protein 26e-62239
NC_010516:2900057:2903973290397329064352463Clostridium botulinum B1 str. Okra, complete genomeflagellar hook-associated protein7e-62238
NC_017297:2905138:2908640290864029110782439Clostridium botulinum F str. 230613 chromosome, complete genomeFlagellar hook-associated protein 22e-60233
NC_009699:2901497:2908502290850229109402439Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar hook-associated protein 22e-60233
NC_010424:1857062:1874966187496618767861821Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar hook-associated 2 domain protein3e-51203
NC_013791:1082951:1092897109289710947351839Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar hook-associated protein FliD4e-51203
NC_009454:2201987:2202923220292322044791557Pelotomaculum thermopropionicum SI, complete genomeflagellar capping protein6e-51202
NC_015913:624859:6321566321566345552400Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar hook-associated protein2e-48194
NC_021182:2921000:2928875292887529308361962Clostridium pasteurianum BC1, complete genomeflagellar capping protein2e-47191
NC_009922:2672396:2695052269505226970401989Alkaliphilus oremlandii OhILAs, complete genomeflagellar hook-associated 2 domain protein4e-46186
NC_016012:561687:5717695717695741622394Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar hook-associated protein8e-46185
NC_019897:128610:1802221802221817601539Thermobacillus composti KWC4 chromosome, complete genomeflagellar capping protein4e-41170
NC_006510:3133965:3135321313532131368231503Geobacillus kaustophilus HTA426, complete genomeflagellar hook-associated protein7e-41169
NC_013411:3251500:3251509325150932530111503Geobacillus sp. Y412MC61, complete genomeflagellar hook-associated 2 domain protein4e-40166
NC_020210:3169258:3169840316984031713451506Geobacillus sp. GHH01, complete genomeflagellar hook-associated protein II7e-40166
NC_014614:2434017:2456460245646024580671608Clostridium sticklandii, complete genomeflagellar hook-associated capping protein 2 (HAP2)2e-37157
NC_017195:3426000:3431830343183034333261497Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar hook-associated protein 26e-37156
NC_019896:577594:5905905905905920861497Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar protein Cap6e-37155
NC_011830:4399642:4409276440927644108081533Desulfitobacterium hafniense DCB-2, complete genomeflagellar hook-associated 2 domain protein9e-37155
NC_010723:801215:8085098085098105962088Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar cap protein FliD9e-37155
NC_015565:1920329:1925979192597919277091731Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeflagellar hook-associated 2 domain-containing protein2e-36154
NC_014328:1046958:1066406106640610687632358Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar hook-associated protein6e-35149
NC_010674:828191:8313318313318334182088Clostridium botulinum B str. Eklund 17B, complete genomeflagellar cap protein FliD2e-34147
NC_017295:2286911:2297673229767322995891917Clostridium acetobutylicum EA 2018 chromosome, complete genomeFlagellar hook-associated protein FliD3e-34147
NC_012914:6583000:6590018659001865917961779Paenibacillus sp. JDR-2, complete genomeflagellar hook-associated 2 domain protein5e-34146
NC_014650:376070:3998783998784014491572Geobacillus sp. Y4.1MC1 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein3e-33143
NC_015660:391627:4112594112594128301572Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar hook-associated 2 domain-containing protein4e-33143
NC_015425:1207314:1219749121974912207741026Clostridium botulinum BKT015925 chromosome, complete genomeflagellar cap protein fliD2e-32141
NC_004193:2553630:2559639255963925611201482Oceanobacillus iheyensis HTE831, complete genomeflagellar hook-associated protein 25e-32139
NC_016641:945284:9490099490099504811473Paenibacillus terrae HPL-003 chromosome, complete genomeflagellar capping protein6e-32139
NC_018664:239000:2612382612382630701833Clostridium acidurici 9a chromosome, complete genomeflagellar hook-associated protein 21e-31138
NC_010337:748467:7667547667547683341581Heliobacterium modesticaldum Ice1, complete genomeflagellar hook-associated protein 26e-30132
NC_004557:1826977:1830649183064918323191671Clostridium tetani E88, complete genomeflagellar cap protein fliD1e-29131
NC_019978:2260395:2270160227016022719111752Halobacteroides halobius DSM 5150, complete genomeflagellar capping protein2e-26121
NC_014378:261064:2641852641852659301746Acetohalobium arabaticum DSM 5501 chromosome, complete genomeflagellar hook-associated 2 domain protein2e-22108
NC_012491:5628000:5634609563460956361201512Brevibacillus brevis NBRC 100599, complete genomeflagellar hook-associated protein 25e-22106
NC_009617:4946000:4947583494758349491601578Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein8e-2099.4
NC_020291:4944835:4985389498538949869301542Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook-associated protein 23e-1894
NC_007503:861668:8729538729538743831431Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar hook-associated protein 26e-1892.8
NC_015391:2059191:2092001209200120934911491Carnobacterium sp. 17-4 chromosome, complete genomeflagellar hook-associated protein 28e-1789.4
NC_014387:605711:6217866217866233301545Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflagellar hook-associated protein FliD15e-1686.7
NC_018870:2232857:225232522523252253029705Thermacetogenium phaeum DSM 12270 chromosome, complete genomeflagellar hook protein 2 FliD6e-1686.3
NC_007644:779376:8020318020318039291899Moorella thermoacetica ATCC 39073, complete genomeFlagellar hook-associated 2-like8e-1582.8
NC_009831:66518:6651866518678941377Shewanella sediminis HAW-EB3, complete genomeflagellar hook-associated 2 domain protein2e-1481.6
NC_012778:263241:2632412632412653552115Eubacterium eligens ATCC 27750, complete genomeflagellar hook-associated protein 23e-1480.5
NC_009253:2615777:2635175263517526370131839Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein2e-1378.2
NC_015224:2017781:2032109203210920335091401Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar capping protein3e-1377.4
NC_008800:2695977:2720258272025827216581401Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar capping protein5e-1376.6
NC_016745:2913712:2927813292781329291981386Oceanimonas sp. GK1 chromosome, complete genomeputative flagellar hook-associated protein 26e-1376.6
NC_012781:3087467:3092978309297830956712694Eubacterium rectale ATCC 33656, complete genomeflagellar capping protein8e-1376.3
NC_013406:6568273:658218365821836583118936Paenibacillus sp. Y412MC10 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein1e-1275.9
NC_015425:1207314:121926412192641219710447Clostridium botulinum BKT015925 chromosome, complete genomeflagellar cap protein fliD2e-1275.1
NC_004547:1970686:1974065197406519754831419Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar hook-associated protein1e-1172.4
NC_011899:1807365:1824578182457818259241347Halothermothrix orenii H 168, complete genomeflagellar hook-associated 2 domain protein2e-1171.2
NC_006177:3192500:3198980319898032004101431Symbiobacterium thermophilum IAM 14863, complete genomeflagellar hook-associated protein2e-1067.8
NC_016514:2950860:2971563297156329729811419Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar hook-associated protein 22e-1067.8
NC_009138:1843998:1887624188762418896121989Herminiimonas arsenicoxydans, complete genomeputative FLAGELLAR HOOK-ASSOCIATED PROTEIN 2 (FILAMENT CAP PROTEIN)2e-0964.7
NC_014837:2586870:2592215259221525936511437Pantoea sp. At-9b chromosome, complete genomeflagellar hook-associated 2 domain-containing protein2e-0964.7
NC_009348:381752:3876633876633889461284Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafB4e-0963.9
NC_010002:661696:6839956839956854161422Delftia acidovorans SPH-1, complete genomeflagellar hook-associated 2 domain protein1e-0862.4
NC_012917:2921932:2940871294087129422951425Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar hook-associated 2 domain protein2e-0861.6
NC_011740:1189455:1209416120941612108221407Escherichia fergusonii ATCC 35469, complete genomeflagellar filament capping protein2e-0861.6
NC_008740:2905990:2908877290887729108501974Marinobacter aquaeolei VT8, complete genomeflagellar hook-associated 2 domain protein8e-0859.3
NC_014562:1844268:1844268184426818456891422Pantoea vagans C9-1 chromosome, complete genomeFlagellar hook-associated protein 21e-0758.9
NC_008570:1852286:1861893186189318633021410Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeflagellar hook-associated protein 22e-0758.5
NC_007759:1356439:1380533138053313836403108Syntrophus aciditrophicus SB, complete genomeflagellar hook and flagellar capping protein3e-0757.8
NC_015138:4905935:4909135490913549105711437Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar hook-associated 2 domain-containing protein5e-0757
NC_015424:1603000:1613923161392316153231401Aeromonas veronii B565 chromosome, complete genomeflagellar hook-associated protein 25e-0757
NC_009348:2836969:2844086284408628454801395Aeromonas salmonicida subsp. salmonicida A449, complete genomeflagellar hook-associated protein 28e-0756.2
NC_016112:806256:8260168260168273651350Methylomicrobium alcaliphilum chromosome, complete genomeflagellar hook-associated 2 domain-containing protein9e-0755.8
NC_015422:4395388:4395388439538843968331446Alicycliphilus denitrificans K601 chromosome, complete genomeflagellar hook-associated 2 domain-containing protein4e-0653.9
NC_014910:4026613:4027120402712040285651446Alicycliphilus denitrificans BC chromosome, complete genomeflagellar hook-associated 2 domain-containing protein4e-0653.9
NC_016816:1912366:1929663192966319310601398Pantoea ananatis LMG 5342, complete genomeflagellar hook-associated protein 2 FliD4e-0653.9