Pre_GI: BLASTP Hits

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Query: NC_020134:2772500:2772502 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2772502, End: 2772906, Length: 405

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020210:3169258:316925831692583169659402Geobacillus sp. GHH01, complete genomechaperone for the export of flagellin3e-31133
NC_009454:2201987:220248022024802202869390Pelotomaculum thermopropionicum SI, complete genomeflagellin-specific chaperone FliS1e-30131
NC_006510:3133965:313471731347173135118402Geobacillus kaustophilus HTA426, complete genomeflagellar protein FliS2e-30130
NC_009922:2672396:269459926945992694979381Alkaliphilus oremlandii OhILAs, complete genomeflagellar protein FliS4e-30129
NC_014650:376070:401490401490401888399Geobacillus sp. Y4.1MC1 chromosome, complete genomeflagellar protein FliS5e-30129
NC_015660:391627:412871412871413269399Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar protein FliS5e-30129
NC_009253:2615777:263394426339442634333390Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar protein FliS6e-30129
NC_015565:1920329:192474419247441925136393Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeflagellar protein FliS4e-29126
NC_019896:577594:592108592108592509402Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar protein FliS2e-27120
NC_017195:3426000:343140734314073431808402Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar protein FliS3e-27120
NC_015589:1240197:126298712629871263376390Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar protein FliS6e-27119
NC_018870:2232857:225144222514422251834393Thermacetogenium phaeum DSM 12270 chromosome, complete genomeflagellar protein FliS7e-27119
NC_014378:261064:272439272439272894456Acetohalobium arabaticum DSM 5501 chromosome, complete genomeHpt protein4e-26116
NC_014614:2434017:245605224560522456432381Clostridium sticklandii, complete genomeFliS8e-26115
NC_013791:1082951:108622010862201086618399Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar protein FliS2e-25114
NC_012781:3087467:309249130924913092886396Eubacterium rectale ATCC 33656, complete genomeflagellar protein2e-25114
NC_007644:779376:804107804107804523417Moorella thermoacetica ATCC 39073, complete genomeflagellar protein FliS1e-25114
NC_018664:239000:263118263118263516399Clostridium acidurici 9a chromosome, complete genomeflagellar protein FliS5e-25112
NC_012491:5628000:563421656342165634593378Brevibacillus brevis NBRC 100599, complete genomeflagellar protein FliS6e-25112
NC_010718:2337209:236678623667862367208423Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar protein FliS1e-24111
NC_015519:924000:930158930158930538381Tepidanaerobacter sp. Re1 chromosome, complete genomeflagellar protein FliS3e-24110
NC_015172:1075592:109079610907961091200405Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar protein FliS5e-24109
NC_010520:2937981:294681229468122947201390Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar protein FliS5e-24109
NC_009699:2901497:291099429109942911383390Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar protein FliS4e-24109
NC_017297:2905138:291113229111322911521390Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar protein FliS4e-24109
NC_009495:2876865:288737328873732887771399Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar protein FliS1e-23108
NC_012563:3090954:310146231014623101851390Clostridium botulinum A2 str. Kyoto, complete genomeflagellar protein FliS1e-23108
NC_009697:2790277:280078528007852801174390Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar protein FliS1e-23108
NC_009698:2727203:273771127377112738100390Clostridium botulinum A str. Hall chromosome, complete genomeflagellar protein FliS1e-23108
NC_012658:2930244:293897829389782939358381Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar protein FliS1e-23108
NC_016584:4363382:437459343745934374979387Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar biosynthetic protein FliS1e-23108
NC_004193:2553630:255922025592202559621402Oceanobacillus iheyensis HTE831, complete genomeflagellar protein FliS1e-23108
NC_004557:1826977:183234218323421832728387Clostridium tetani E88, complete genomeflagellar protein fliS7e-24108
NC_021182:2921000:293100429310042931390387Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FliS2e-23107
NC_014328:1046958:106571010657101066096387Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar protein FliS3e-23107
NC_007503:861668:874400874400874777378Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar protein FliS3e-23107
NC_014387:605711:623391623391623828438Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeflagellar protein FliS14e-23106
NC_012778:263241:265404265404265790387Eubacterium eligens ATCC 27750, complete genomeflagellar protein FliS2e-22104
NC_010337:748467:765675765675766085411Heliobacterium modesticaldum Ice1, complete genomeflagellar protein flis2e-22104
NC_010424:1857062:187680518768051877209405Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar protein FliS3e-22103
NC_014377:1546124:155822115582211558607387Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar protein FliS6e-22102
NC_010516:2900057:290645729064572906843387Clostridium botulinum B1 str. Okra, complete genomeflagellar protein FliS7e-22102
NC_010723:801215:808112808112808489378Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar protein FliS2e-21101
NC_016641:945284:948611948611948994384Paenibacillus terrae HPL-003 chromosome, complete genomeflagellar protein fliS2e-21100
NC_015425:1207314:121878112187811219182402Clostridium botulinum BKT015925 chromosome, complete genomeflagellar protein FliS2e-21100
NC_011830:4399642:440886944088694409261393Desulfitobacterium hafniense DCB-2, complete genomeflagellar protein FliS6e-2199.4
NC_013406:6568273:658141665814166581817402Paenibacillus sp. Y412MC10 chromosome, complete genomeflagellar protein FliS1e-2098.6
NC_010674:828191:830933830933831310378Clostridium botulinum B str. Eklund 17B, complete genomeflagellar protein FliS2e-2097.8
NC_011899:1807365:182155618215561821978423Halothermothrix orenii H 168, complete genomeflagellar protein FliS2e-2097.4
NC_020291:4944835:498705849870584987438381Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar assembly protein FliS5e-2096.3
NC_019897:128610:181778181778182164387Thermobacillus composti KWC4 chromosome, complete genomeflagellar biosynthetic protein FliS2e-1994.4
NC_017295:2286911:229960822996082299988381Clostridium acetobutylicum EA 2018 chromosome, complete genomeFlagellar protein FliS3e-1994
NC_009617:4946000:494920949492094949589381Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar protein FliS6e-1992.8
NC_019978:2260395:226732122673212267740420Halobacteroides halobius DSM 5150, complete genomeflagellar biosynthetic protein FliS7e-1889.4
NC_015391:2059191:209097420909742091342369Carnobacterium sp. 17-4 chromosome, complete genomeflagellar protein FliS1e-1788.6
NC_012914:6583000:658957865895786590003426Paenibacillus sp. JDR-2, complete genomeflagellar protein FliS6e-1786.3
NC_007517:480303:489861489861490283423Geobacter metallireducens GS-15, complete genomeFlagellar protein FliS5e-1683.2
NC_020304:3447847:344875534487553449222468Desulfocapsa sulfexigens DSM 10523, complete genomeflagellar biosynthetic protein FliS1e-1478.6
NC_013093:2599591:260761626076162608014399Actinosynnema mirum DSM 43827, complete genomeflagellar protein FliS6e-1476.3
NC_013223:724394:761168761168761626459Desulfohalobium retbaense DSM 5692, complete genomeflagellar protein FliS3e-1373.9
NC_015913:624859:631758631758632138381Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar protein FliS3e-1373.6
NC_012880:1765920:182034418203441820751408Dickeya dadantii Ech703, complete genomeflagellar protein FliS4e-1373.6
NC_013851:2211120:223816322381632238564402Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar protein FliS4e-1373.6
NC_008340:774206:786827786827787264438Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar protein FliS4e-1373.2
NC_008740:2905990:290843929084392908843405Marinobacter aquaeolei VT8, complete genomeflagellar protein FliS2e-1270.9
NC_014500:3023762:305026930502693050679411Dickeya dadantii 3937 chromosome, complete genomeflagellar biosynthesis protein fliS3e-1270.5
NC_006177:3192500:319856331985633198946384Symbiobacterium thermophilum IAM 14863, complete genomeflagellar protein5e-1269.7
NC_012793:3035978:305122630512263051654429Geobacillus sp. WCH70, complete genomeflagellar protein FliS5e-1269.7
NC_016514:2950860:297299529729952973399405Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar protein fliS9e-1268.9
NC_006510:3133965:316241831624183162843426Geobacillus kaustophilus HTA426, complete genomeflagellar biosynthesis1e-1168.9
NC_011567:2556915:256420025642002564640441Anoxybacillus flavithermus WK1, complete genomeFlagellin-specific chaperone FliS1e-1168.6
NC_008800:2695977:272166927216692722067399Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar protein FliS2e-1168.2
NC_011740:1189455:120898712089871209397411Escherichia fergusonii ATCC 35469, complete genomeflagellar protein potentiates polymerization3e-1167.4
NC_009092:1504363:156976115697611570171411Shewanella loihica PV-4, complete genomeflagellar protein FliS3e-1167.4
NC_012912:1788308:179429917942991794709411Dickeya zeae Ech1591, complete genomeflagellar protein FliS4e-1167
NC_016816:1912366:192923819292381929648411Pantoea ananatis LMG 5342, complete genomeflagellar biosynthesis protein FliS4e-1167
NC_009664:570768:577618577618578034417Kineococcus radiotolerans SRS30216, complete genomeflagellar protein FliS7e-1165.9
NC_015968:2845751:285157928515792851989411Enterobacter asburiae LF7a chromosome, complete genomeflagellar protein FliS7e-1165.9
NC_016112:806256:827372827372827794423Methylomicrobium alcaliphilum chromosome, complete genomeB-type flagellar protein fliS7e-1165.9
NC_016616:1861852:187072918707291871172444Dechlorosoma suillum PS chromosome, complete genomeflagellar biosynthetic protein FliS1e-1065.5
NC_013592:1730505:173527017352701735686417Dickeya dadantii Ech586, complete genomeflagellar protein FliS9e-1165.5
NC_007575:192095:208925208925209323399Sulfurimonas denitrificans DSM 1251, complete genomeflagellar protein FliS1e-1065.1
NC_007759:1356439:137996713799671380491525Syntrophus aciditrophicus SB, complete genomeflagellin-specific chaperone2e-1064.3
NC_015224:2017781:203170020317002032041342Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar protein FliS3e-1063.9
NC_015138:4905935:490862349086234909069447Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar protein FliS4e-1063.5
NC_020260:1293860:132360613236061324016411Cronobacter sakazakii Sp291, complete genomeflagellar protein FliS4e-1063.5
NC_009778:1222273:124699412469941247404411Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1063.5
NC_016012:561687:571440571440571751312Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar protein fliS4e-1063.5
NC_014910:4026613:402661340266134027053441Alicycliphilus denitrificans BC chromosome, complete genomeflagellar protein flis3e-1063.5
NC_009439:3104000:310894531089453109325381Pseudomonas mendocina ymp, complete genomeflagellar protein FliS7e-1062.8
NC_005085:4157257:417726841772684177705438Chromobacterium violaceum ATCC 12472, complete genomeprobable flagellar protein FliS1e-0962
NC_004547:1970686:197361519736151974025411Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar protein FliS3e-0960.5
NC_014562:1844268:184569818456981846105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar protein fliS4e-0960.1
NC_015733:4253961:426173842617384262133396Pseudomonas putida S16 chromosome, complete genomeflagellar protein FliS4e-0960.1
NC_012917:2921932:294232229423222942732411Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar protein FliS5e-0959.7
NC_014121:1357339:137321813732181373628411Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelagellar protein FliS1e-0858.9
NC_007508:2277640:230054923005492300962414Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellin-specific chaperone FliS1e-0858.5
NC_009922:2672396:267941026794102679895486Alkaliphilus oremlandii OhILAs, complete genomeflagellar protein FliS2e-0858.2
NC_015850:1497998:151710915171091517486378Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar biosynthesis protein fliS3e-0857.4
NC_012108:4118888:414690741469074147332426Desulfobacterium autotrophicum HRM2, complete genomeFliS3e-0857.4
NC_009434:2006500:201584820158482016234387Pseudomonas stutzeri A1501, complete genomeflagellar protein FliS5e-0856.6
NC_014837:2586870:259366225936622594069408Pantoea sp. At-9b chromosome, complete genomeflagellar protein FliS6e-0856.2
NC_016745:2913712:292711429271142927500387Oceanimonas sp. GK1 chromosome, complete genomeflagellar protein FliS7e-0855.8
NC_013791:2839516:285394528539452854370426Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar protein FliS1e-0755.5
NC_009348:381752:389001389001389393393Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafC2e-0754.7
NC_015731:990000:100017010001701000598429Nitrosomonas sp. Is79A3 chromosome, complete genomeflagellar protein FliS2e-0754.3
NC_016884:3219030:322683832268383227269432Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeflagellar protein FliS3e-0753.9
NC_015757:2343193:235100123510012351438438Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein3e-0753.9
NC_015276:3669263:368070836807083681130423Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar protein FliS4e-0753.5
NC_008570:1852286:186332818633281863750423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeflagellar protein FliS6e-0752.8
NC_015740:1845370:185346618534661853852387Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellar protein FliS6e-0752.8
NC_015424:1603000:161534816153481615770423Aeromonas veronii B565 chromosome, complete genomeflagellar protein FliS6e-0752.8
NC_009439:3104000:310939831093983109790393Pseudomonas mendocina ymp, complete genomeflagellar protein FliS2e-0651.6
NC_009348:2836969:284363828436382844060423Aeromonas salmonicida subsp. salmonicida A449, complete genomeflagellar protein FliS3e-0650.4
NC_015563:606783:624564624564624977414Delftia sp. Cs1-4 chromosome, complete genomeflagellar protein FliS5e-0649.7