Pre_GI: BLASTP Hits

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Query: NC_020134:2295092:2303944 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2303944, End: 2304861, Length: 918

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:1342172:134217213421721343071900Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein9e-64243
NC_015949:1887478:189138918913891892285897Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomehypothetical protein4e-45181
NC_013520:1860286:187702318770231877940918Veillonella parvula DSM 2008, complete genomehypothetical protein5e-44178
NC_016633:1898234:191317619131761914033858Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehypothetical protein5e-33141
NC_020409:393329:394641394641395522882Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein9e-27120
NC_009464:300422:316026316026316976951Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein2e-24113
NC_013895:35410:5031950319514071089Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein3e-21102
NC_015500:2636753:265903726590372659954918Treponema brennaborense DSM 12168 chromosome, complete genomeUncharacterized conserved protein UCP0186888e-1891.3