Pre_GI: BLASTP Hits

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Query: NC_020134:2295092:2296162 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2296162, End: 2297115, Length: 954

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017295:279633:298767298767299708942Clostridium acetobutylicum EA 2018 chromosome, complete genomeL-lactate dehydrogenase4e-109394
NC_003030:279643:298777298777299718942Clostridium acetobutylicum ATCC 824, complete genomeL-lactate dehydrogenase4e-109394
NC_015687:279641:298775298775299716942Clostridium acetobutylicum DSM 1731 chromosome, complete genomeL-lactate dehydrogenase4e-109394
NC_021182:2921000:294859029485902949555966Clostridium pasteurianum BC1, complete genomeL-lactate dehydrogenase7e-105380
NC_003366:128783:141837141837142790954Clostridium perfringens str. 13, complete genomeL-lactate dehydrogenase3e-101368
NC_015389:809474:850159850159851109951Coriobacterium glomerans PW2 chromosome, complete genomeL-lactate dehydrogenase3e-88325
NC_014377:1400544:140655414065541407495942Thermosediminibacter oceani DSM 16646 chromosome, complete genomeL-lactate dehydrogenase6e-88324
NC_014219:2509062:253089725308972531850954Bacillus selenitireducens MLS10 chromosome, complete genomeL-lactate dehydrogenase2e-86319
NC_009253:3017280:303247730324773033421945Desulfotomaculum reducens MI-1 chromosome, complete genomeL-lactate dehydrogenase2e-82305
NC_014171:4708282:471577647157764716720945Bacillus thuringiensis BMB171 chromosome, complete genomeL-lactate dehydrogenase2e-80299
NC_017208:4845281:485287548528754853819945Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeL-lactate dehydrogenase2e-80298
NC_017343:224777:247243247243248196954Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeL-lactate dehydrogenase1e-77290
NC_016605:233087:233087233087234064978Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeL-lactate dehydrogenase2e-73276
NC_021175:964224:979213979213980199987Streptococcus oligofermentans AS 1.3089, complete genomeL-lactate dehydrogenase1e-72273
NC_010673:82586:825868258683536951Borrelia hermsii DAH, complete genomeL-lactate dehydrogenase4e-69261
NC_011244:94756:947569475695718963Borrelia recurrentis A1, complete genomeL-lactate dehydrogenase4e-69261
NC_008710:79100:825188251883468951Borrelia turicatae 91E135, complete genomeL-lactate dehydrogenase6e-69261
NC_021182:4882494:488522148852214886183963Clostridium pasteurianum BC1, complete genomeL-lactate dehydrogenase3e-65248
NC_014335:4697293:4700943470094347020461104Bacillus cereus biovar anthracis str. CI chromosome, completeL-lactate dehydrogenase4e-64245
NC_004722:4899940:489994048999404900890951Bacillus cereus ATCC 14579, complete genomeL-lactate dehydrogenase8e-64244
NC_005957:4757215:4757215475721547584201206Bacillus thuringiensis serovar konkukian str. 97-27, completeL-lactate dehydrogenase8e-64244
NC_016771:4692772:469380846938084694758951Bacillus cereus NC7401, complete genomeL-lactate dehydrogenase9e-64244
NC_014171:4812340:481234048123404813290951Bacillus thuringiensis BMB171 chromosome, complete genomeL-lactate dehydrogenase9e-64244
NC_011969:4680836:468083646808364681786951Bacillus cereus Q1 chromosome, complete genomeL-lactate dehydrogenase9e-64244
NC_011658:4739951:473995147399514740901951Bacillus cereus AH187 chromosome, complete genomeL-lactate dehydrogenase9e-64244
NC_006274:4814601:481563748156374816587951Bacillus cereus E33L, complete genomeL-lactate dehydrogenase9e-64244
NC_011725:4944072:494407249440724945022951Bacillus cereus B4264 chromosome, complete genomeL-lactate dehydrogenase8e-64244
NC_007530:4744870:474756747475674748517951Bacillus anthracis str. 'Ames Ancestor', complete genomeL-lactate dehydrogenase7e-64244
NC_003997:4745027:474744147474414748391951Bacillus anthracis str. Ames, complete genomeL-lactate dehydrogenase7e-64244
NC_005945:4747740:474877647487764749726951Bacillus anthracis str. Sterne, complete genomeL-lactate dehydrogenase7e-64244
NC_011773:4807911:480791148079114808861951Bacillus cereus AH820 chromosome, complete genomeL-lactate dehydrogenase7e-64244
NC_012659:4745053:474746747474674748417951Bacillus anthracis str. A0248, complete genomeL-lactate dehydrogenase7e-64244
NC_003909:4737882:473788247378824738832951Bacillus cereus ATCC 10987, complete genomeL-lactate dehydrogenase6e-64244
NC_011772:4875893:489862248986224899572951Bacillus cereus G9842, complete genomeL-lactate dehydrogenase5e-64244
NC_017208:4996992:499802449980244998974951Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeL-lactate dehydrogenase5e-64244
NC_013205:576583:576583576583577521939Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,L-lactate dehydrogenase1e-62239
NC_015385:1406419:140985414098541410795942Treponema succinifaciens DSM 2489 chromosome, complete genomeL-lactate dehydrogenase3e-62238
NC_015697:256000:275364275364276302939Lactobacillus reuteri SD2112 chromosome, complete genomeL-lactate dehydrogenase3e-58225
NC_017075:2733898:275762227576222758533912Rubrivivax gelatinosus IL144, complete genomeL-lactate dehydrogenase Ldh2e-57223
NC_019978:315346:315346315346316278933Halobacteroides halobius DSM 5150, complete genomeL-lactate dehydrogenase5e-57221
NC_014643:2056280:213641721364172137376960Rothia dentocariosa ATCC 17931 chromosome, complete genomemalate dehydrogenase (NAD)1e-56219
NC_020291:6216000:623125562312556232202948Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeL-lactate dehydrogenase 35e-56218
NC_010723:3530000:357499635749963575943948Clostridium botulinum E3 str. Alaska E43, complete genomeL-lactate dehydrogenase3e-55215
NC_015425:641000:643052643052644023972Clostridium botulinum BKT015925 chromosome, complete genomeL-lactate dehydrogenase7e-55214
NC_006055:689956:694198694198695151954Mesoplasma florum L1, complete genomeL-lactate dehydrogenase1e-52206
NC_010674:3674739:371761437176143718561948Clostridium botulinum B str. Eklund 17B, complete genomeL-lactate dehydrogenase3e-52205
NC_019908:748635:754388754388755338951Brachyspira pilosicoli P43/6/78 chromosome, complete genomeL-lactate dehydrogenase1e-48193
NC_014330:2457731:248535124853512486301951Brachyspira pilosicoli 95/1000 chromosome, complete genomeL-lactate dehydrogenase1e-48193
NC_012491:5914500:592861059286105929551942Brevibacillus brevis NBRC 100599, complete genomemalate dehydrogenase6e-46184
NC_012115:1122905:113331511333151134265951Nautilia profundicola AmH, complete genomemalate dehydrogenase, NAD-dependent3e-45182
NC_009674:3344000:334480333448033345741939Bacillus cytotoxicus NVH 391-98 chromosome, complete genomemalate dehydrogenase4e-45182
NC_014171:4447856:444785644478564448794939Bacillus thuringiensis BMB171 chromosome, complete genomemalate dehydrogenase3e-44179
NC_017200:4401945:440316044031604404098939Bacillus thuringiensis serovar finitimus YBT-020 chromosome,malate dehydrogenase4e-44178
NC_016779:4361140:436114043611404362078939Bacillus cereus F837/76 chromosome, complete genomemalate dehydrogenase4e-44178
NC_012659:4399094:439909443990944400032939Bacillus anthracis str. A0248, complete genomemalate dehydrogenase4e-44178
NC_005945:4399756:439975643997564400694939Bacillus anthracis str. Sterne, complete genomemalate dehydrogenase4e-44178
NC_003997:4399067:439906743990674400005939Bacillus anthracis str. Ames, complete genomemalate dehydrogenase4e-44178
NC_014335:4327584:432758443275844328522939Bacillus cereus biovar anthracis str. CI chromosome, completemalate dehydrogenase4e-44178
NC_012883:1462000:147752014775201478449930Thermococcus sibiricus MM 739, complete genomeMalate dehydrogenase1e-43177
NC_011830:1923158:192450619245061925468963Desulfitobacterium hafniense DCB-2, complete genomemalate dehydrogenase, NAD-dependent3e-43176
NC_009792:1479779:1500777150077715017931017Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-43174
NC_010628:2418000:242044424204442421397954Nostoc punctiforme PCC 73102, complete genomeLactate/malate dehydrogenase7e-43174
NC_009662:837500:843287843287844243957Nitratiruptor sp. SB155-2, complete genomemalate dehydrogenase, NAD-dependent5e-42171
NC_015496:2155816:217610121761012177027927Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomemalate dehydrogenase, NAD-dependent1e-41170
NC_009778:1717458:175043717504371751357921Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-41170
NC_014019:3543389:354920235492023550158957Bacillus megaterium QM B1551 chromosome, complete genomemalate dehydrogenase, NAD-dependent4e-41168
NC_015722:852000:866392866392867345954Candidatus Midichloria mitochondrii IricVA chromosome, completemalate/lactate dehydrogenase3e-40166
NC_015565:1511426:151142615114261512355930Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeMalate dehydrogenase1e-40166
NC_015589:2019370:202259520225952023524930Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemalate dehydrogenase NAD-dependent4e-40165
NC_009512:755658:772558772558773487930Pseudomonas putida F1, complete genomeLactate/malate dehydrogenase4e-39162
NC_014935:342491:367256367256368236981Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemalate dehydrogenase (nad)4e-39161
NC_007681:770267:782582782582783535954Methanosphaera stadtmanae DSM 3091, complete genomemalate/lactate dehydrogenase7e-39161
NC_014041:4093190:409634340963434097269927Zunongwangia profunda SM-A87 chromosome, complete genomemalate dehydrogenase7e-39161
NC_017986:3407913:343255534325553433484930Pseudomonas putida ND6 chromosome, complete genomeMalate dehydrogenase1e-38160
NC_007354:569321:597186597186598127942Ehrlichia canis str. Jake, complete genomeL-lactate dehydrogenase9e-39160
NC_018643:1:155121551216474963Alpha proteobacterium HIMB5 chromosome, complete genomemalate dehydrogenase (NAD)2e-38159
NC_012704:1979183:1995086199508619960931008Corynebacterium kroppenstedtii DSM 44385, complete genomeputative lactate dehydrogenase2e-38159
NC_005295:689500:713106713106714050945Ehrlichia ruminantium str. Welgevonden, complete genomemalate dehydrogenase6e-38158
NC_006831:664000:688572688572689525954Ehrlichia ruminantium str. Gardel, complete genomeMalate dehydrogenase6e-38157
NC_006832:668913:692944692944693897954Ehrlichia ruminantium str. Welgevonden, complete genomeMalate dehydrogenase6e-38157
NC_007205:221539:241897241897242859963Candidatus Pelagibacter ubique HTCC1062, complete genomeMalate dehydrogenase3e-37155
NC_013939:913890:921313921313922290978Deferribacter desulfuricans SSM1, complete genomemalate dehydrogenase9e-37154
NC_013407:333387:342451342451343392942Methanocaldococcus vulcanius M7, complete genomeMalate dehydrogenase (NADP(+))8e-37154
NC_014002:1129349:113097711309771131900924Methanohalophilus mahii DSM 5219 chromosome, complete genomemalate dehydrogenase (NAD)7e-37154
NC_013202:771161:777203777203778117915Halomicrobium mukohataei DSM 12286, complete genomeLactate/malate dehydrogenase4e-36152
NC_015672:699904:710302710302711276975Flexistipes sinusarabici DSM 4947 chromosome, complete genomeMalate dehydrogenase4e-36152
NC_000911:2777447:279542627954262796400975Synechocystis sp. PCC 6803, complete genome2-ketoacid dehydrogenase; malate dehydrogenase; lactate dehydrogenase4e-34145
NC_017039:2775275:279325427932542794228975Synechocystis sp. PCC 6803 substr. PCC-P, complete genome2-ketoacid dehydrogenase using malate or lactate as substrate4e-34145
NC_017052:2775263:279324227932422794216975Synechocystis sp. PCC 6803 substr. PCC-N, complete genome2-ketoacid dehydrogenase using malate or lactate as substrate4e-34145
NC_017277:2776264:279424327942432795217975Synechocystis sp. PCC 6803, complete genome2-ketoacid dehydrogenase using malate or lactate as substrate4e-34145
NC_012440:1080675:108357510835751084573999Persephonella marina EX-H1, complete genomemalate dehydrogenase3e-34145
NC_012438:565419:570649570649571647999Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemalate dehydrogenase2e-33143
NC_017059:3163319:3175500317550031766061107Rhodospirillum photometricum DSM 122, complete genomemalate dehydrogenase2e-33143
NC_015380:412277:427925427925428887963Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomemalate dehydrogenase5e-33141
NC_002947:737924:762063762063762899837Pseudomonas putida KT2440, complete genomemalate dehydrogenase7e-33141
NC_014774:671695:682926682926683888963Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completemalate dehydrogenase1e-32140
NC_004829:64000:790877908780058972Mycoplasma gallisepticum R, complete genomeMdh3e-32139
NC_010730:627465:640958640958641956999Sulfurihydrogenibium sp. YO3AOP1, complete genomeLactate/malate dehydrogenase3e-32139
NC_007517:1515493:152425115242511525204954Geobacter metallireducens GS-15, complete genomeMalate dehydrogenase, NAD-dependent2e-31136
NC_002939:1601706:160880416088041609757954Geobacter sulfurreducens PCA, complete genomemalate dehydrogenase3e-31135
NC_019907:819165:831502831502832464963Liberibacter crescens BT-1 chromosome, complete genomemalate dehydrogenase2e-30133
NC_006085:15246:152461524616214969Propionibacterium acnes KPA171202, complete genomeL-lactate dehydrogenase3e-30132
NC_016512:15102:151021510216070969Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeL-lactate dehydrogenase3e-30132
NC_016516:15102:151021510216070969Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeL-lactate dehydrogenase3e-30132
NC_015873:1411718:143216514321651433121957Megasphaera elsdenii DSM 20460, complete genomeL-lactate dehydrogenase3e-30132
NC_014039:15236:152361523616204969Propionibacterium acnes SK137 chromosome, complete genomelactate/malate dehydrogenase, NAD binding domain protein7e-30131
NC_016511:15100:151001510016068969Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeL-lactate dehydrogenase2e-29129
NC_008599:903530:914784914784915704921Campylobacter fetus subsp. fetus 82-40, complete genomemalate dehydrogenase1e-28127
NC_007796:1291671:130486213048621305734873Methanospirillum hungatei JF-1, complete genomeLactate/malate dehydrogenase2e-25116
NC_014299:82584:863858638587338954Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceL-lactate dehydrogenase2e-22106
NC_003106:1809137:182722418272241828159936Sulfolobus tokodaii str. 7, complete genomehypothetical L-lactate dehydrogenase3e-2099
NC_019960:260997:269370269370270362993Prevotella dentalis DSM 3688 chromosome 1, complete sequencemalate/lactate dehydrogenase2e-1377
NC_014448:9419:317033170332605903Mycoplasma hyorhinis HUB-1 chromosome, complete genomeL-lactate dehydrogenase 28e-1374.7
NC_015671:2011462:2014064201406420151521089Cellvibrio gilvus ATCC 13127 chromosome, complete genomeLactate/malate dehydrogenase2e-1170.1
NC_011761:2641481:2690132269013226911991068Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completelactate/malate dehydrogenase family protein2e-1066.6
NC_011206:2549132:2589971258997125910381068Acidithiobacillus ferrooxidans ATCC 53993, complete genomeLactate/malate dehydrogenase2e-1066.6
NC_013716:4824541:483944048394404840378939Citrobacter rodentium ICC168, complete genomemalate dehydrogenase1e-0757.8
NC_015501:868909:868909868909869907999Porphyromonas asaccharolytica DSM 20707 chromosome, completeLactate/malate dehydrogenase2e-0653.9