Pre_GI: BLASTP Hits

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Query: NC_020134:2237421:2247999 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2247999, End: 2248769, Length: 771

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017208:3816753:385386838538683854641774Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribonuclease HII3e-53208
NC_011969:3575988:358576435857643586537774Bacillus cereus Q1 chromosome, complete genomeribonuclease hii8e-53207
NC_003909:3606177:362915736291573629930774Bacillus cereus ATCC 10987, complete genomeribonuclease HII8e-53207
NC_011658:3603009:364180436418043642577774Bacillus cereus AH187 chromosome, complete genomeribonuclease HII3e-52205
NC_007530:3616828:365388636538863654659774Bacillus anthracis str. 'Ames Ancestor', complete genomeribonuclease HII1e-51203
NC_005945:3636321:365445436544543655227774Bacillus anthracis str. Sterne, complete genomeribonuclease HII1e-51203
NC_003997:3617000:365375936537593654532774Bacillus anthracis str. Ames, complete genomeribonuclease HII1e-51203
NC_012581:559182:584028584028584801774Bacillus anthracis str. CDC 684 chromosome, complete genomeribonuclease HII1e-51203
NC_012659:3617000:365378636537863654559774Bacillus anthracis str. A0248, complete genomeribonuclease HII1e-51203
NC_014171:3726054:373773537377353738508774Bacillus thuringiensis BMB171 chromosome, complete genomeribonuclease HII7e-52203
NC_014335:3589726:360461336046133605386774Bacillus cereus biovar anthracis str. CI chromosome, completeribonuclease HII2e-51202
NC_005957:3665657:367543236754323676205774Bacillus thuringiensis serovar konkukian str. 97-27, completeribonuclease HII2e-51202
NC_011772:3821917:382419338241933824966774Bacillus cereus G9842, complete genomeribonuclease HII4e-51201
NC_009848:1542978:155788315578831558647765Bacillus pumilus SAFR-032, complete genomeribonuclease HII4e-51201
UCMB5137:1159520:117677111767711177538768Bacillus atrophaeus UCMB-5137ribonuclease HII2e-48192
NC_016584:4860360:487549548754954876277783Desulfosporosinus orientis DSM 765 chromosome, complete genomeribonuclease HII1e-46186
NC_018515:3865522:388024138802413881023783Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeribonuclease HII4e-46184
NC_016826:929259:932956932956933735780Streptococcus infantarius subsp. infantarius CJ18 chromosome,ribonuclease HII2e-45182
NC_012471:1197534:120085812008581201631774Streptococcus equi subsp. equi 4047, complete genomeribonuclease HII5e-45181
NC_014624:2668157:266854926685492669337789Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein6e-45181
NC_013216:1219775:122327412232741224080807Desulfotomaculum acetoxidans DSM 771, complete genomeRibonuclease H1e-44179
NC_010382:1607013:162535616253561626117762Lysinibacillus sphaericus C3-41, complete genomeribonuclease HII1e-39163
NC_013199:1407742:142265514226551423413759Lactobacillus rhamnosus Lc 705, complete genomeRibonuclease HII (RNase HII)3e-39161
NC_015422:3581848:359769235976923598312621Alicycliphilus denitrificans K601 chromosome, complete genomeribonuclease H1e-38160
NC_014836:2325559:234480823448082345413606Desulfurispirillum indicum S5 chromosome, complete genomeribonuclease H8e-39160
NC_004461:921364:921364921364922134771Staphylococcus epidermidis ATCC 12228, complete genomeRNase HII2e-38159
NC_015966:2841420:286183828618382862434597Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeribonuclease H3e-38158
NC_016024:1974715:199796319979631998595633Candidatus Chloracidobacterium thermophilum B chromosome chromosomeRNase HII2e-37155
NC_011145:306623:326887326887327738852Anaeromyxobacter sp. K, complete genomeRibonuclease H2e-36152
NC_017030:6878319:690000469000046900882879Corallococcus coralloides DSM 2259 chromosome, complete genomeribonuclease HII2e-36152
NC_011661:1542335:154419815441981544809612Dictyoglomus turgidum DSM 6724, complete genomeRibonuclease H3e-36151
NC_007760:308500:324321324321325172852Anaeromyxobacter dehalogenans 2CP-C, complete genomeribonuclease H7e-36150
NC_014926:1483974:150502115050211505749729Thermovibrio ammonificans HB-1 chromosome, complete genomeRibonuclease H9e-36150
NC_011891:315182:335393335393336244852Anaeromyxobacter dehalogenans 2CP-1, complete genomeRibonuclease H1e-35150
NC_015846:445000:457566457566458159594Capnocytophaga canimorsus Cc5 chromosome, complete genomeribonuclease HII3e-35148
NC_011297:1357947:135981013598101360421612Dictyoglomus thermophilum H-6-12, complete genomeribonuclease HII7e-35147
NC_014483:1973233:198511019851101985757648Paenibacillus polymyxa E681 chromosome, complete genomeRibonuclease HII (RNase HII)2e-34146
NC_017243:2778427:279598827959882796668681Brachyspira intermedia PWS/A chromosome, complete genomeribonuclease HII2e-34145
NC_015844:1100664:111782211178221118427606Zobellia galactanivorans, complete genomeribonuclease HII7e-34144
NC_011059:1:199591995920579621Prosthecochloris aestuarii DSM 271, complete genomeRibonuclease H2e-32139
NC_014752:131994:150217150217150855639Neisseria lactamica ST-640, complete genomeribonuclease HII5e-32137
NC_016633:541559:548670548670549299630Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeribonuclease HII7e-32137
NC_014654:1529500:153231515323151533112798Halanaerobium sp. 'sapolanicus' chromosome, complete genomeRibonuclease H1e-31136
NC_020291:1437431:145086714508671451679813Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribonuclease HII1e-31136
NC_015638:1885041:188828818882881888887600Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeribonuclease H3e-31135
NC_015381:2859000:292778029277802928433654Burkholderia gladioli BSR3 chromosome 1, complete sequenceRibonuclease HII9e-31134
NC_006142:243899:243899243899244480582Rickettsia typhi str. Wilmington, complete genomeribonuclease HII8e-31134
NC_017062:244330:244330244330244911582Rickettsia typhi str. B9991CWPP chromosome, complete genomeribonuclease HII8e-31134
NC_017066:243913:243913243913244494582Rickettsia typhi str. TH1527 chromosome, complete genomeribonuclease HII8e-31134
NC_006832:252952:280074280074280736663Ehrlichia ruminantium str. Welgevonden, complete genomeRibonuclease HII7e-31134
NC_005295:272708:300081300081300719639Ehrlichia ruminantium str. Welgevonden, complete genomeribonuclease HII7e-31134
NC_006831:250074:276941276941277603663Ehrlichia ruminantium str. Gardel, complete genomeRibonuclease HII7e-31134
NC_014472:2275254:227939422793942279990597Flavobacteriales bacterium HTCC2170 chromosome, complete genomeribonuclease HII3e-30132
NC_015160:3749636:374963637496363750235600Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRibonuclease H3e-30132
NC_007799:968499:968499968499969128630Ehrlichia chaffeensis str. Arkansas, complete genomeribonuclease HII5e-30131
NC_015164:2305415:230634223063422306944603Bacteroides salanitronis DSM 18170 chromosome, complete genomeRibonuclease H4e-30131
NC_004663:4373902:439585143958514396453603Bacteroides thetaiotaomicron VPI-5482, complete genomeribonuclease HII2e-29129
NC_015496:1857900:186118618611861861824639Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRibonuclease H2e-29129
NC_009662:222964:224216224216224764549Nitratiruptor sp. SB155-2, complete genomeribonuclease HII4e-29128
NC_014329:1407880:144037114403711441093723Corynebacterium pseudotuberculosis FRC41 chromosome, completeribonuclease HII4e-29128
NC_017300:1426975:143772914377291438451723Corynebacterium pseudotuberculosis 1002 chromosome, completeRibonuclease HII4e-29128
NC_017301:1425293:144011714401171440839723Corynebacterium pseudotuberculosis C231 chromosome, completeRibonuclease HII4e-29128
NC_017192:2153461:215346121534612154033573Arcobacter sp. L, complete genomeribonuclease HII9e-29127
NC_014934:869715:894068894068894664597Cellulophaga algicola DSM 14237 chromosome, complete genomeribonuclease h2e-28126
NC_016932:1414226:142497514249751425697723Corynebacterium pseudotuberculosis 316 chromosome, complete genomeribonuclease HII4e-28125
NC_000918:1353310:137452113745211375111591Aquifex aeolicus VF5, complete genomeRNase HII4e-28125
NC_015577:2203835:222375222237522224327576Treponema azotonutricium ZAS-9 chromosome, complete genomeribonuclease HII2e-28125
NC_010520:2635750:263802726380272638836810Clostridium botulinum A3 str. Loch Maree, complete genomeribonuclease HII6e-28124
NC_007413:1570000:157282115728211573498678Anabaena variabilis ATCC 29413, complete genomeRibonuclease HII/HIII8e-28124
NC_019771:2816732:281890928189092819586678Anabaena cylindrica PCC 7122, complete genomeRNase HII9e-28124
NC_002935:1534889:153849115384911539180690Corynebacterium diphtheriae NCTC 13129, complete genomeribonuclease HII1e-27123
NC_016782:1520324:152681715268171527506690Corynebacterium diphtheriae 241 chromosome, complete genomeribonuclease HII1e-27123
NC_016786:1519481:152708215270821527771690Corynebacterium diphtheriae HC01 chromosome, complete genomeribonuclease HII1e-27123
NC_016790:1480441:149434414943441495033690Corynebacterium diphtheriae VA01 chromosome, complete genomeribonuclease HII1e-27123
NC_014248:685656:703684703684704349666Nostoc azollae 0708 chromosome, complete genomeribonuclease H1e-27123
NC_019949:956791:966414966414967013600Mycoplasma cynos C142 complete genomeRibonuclease HII1e-27123
NC_016788:1509943:152184915218491522538690Corynebacterium diphtheriae HC04 chromosome, complete genomeribonuclease HII2e-27122
NC_016787:1509831:151838415183841519073690Corynebacterium diphtheriae HC03 chromosome, complete genomeribonuclease HII2e-27122
NC_014328:1379437:139319713931971394054858Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ribonuclease HII2e-27122
NC_007109:1105251:112296211229621123543582Rickettsia felis URRWXCal2, complete genomeribonuclease HII2e-27122
NC_003272:5184000:518637551863755187052678Nostoc sp. PCC 7120, complete genomeribonuclease HII5e-27121
NC_009495:2571732:257501025750102575819810Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeribonuclease HII4e-27121
NC_003103:266013:268353268353268934582Rickettsia conorii str. Malish 7, complete genomeribonuclease HII4e-27121
NC_002967:1589069:159126415912641591860597Treponema denticola ATCC 35405, complete genomeribonuclease HII9e-27120
NC_009840:1485383:151964815196481520265618Prochlorococcus marinus str. MIT 9215, complete genomeRibonuclease HII and HIII1e-26120
NC_008816:1416711:144986614498661450483618Prochlorococcus marinus str. AS9601, complete genomeRibonuclease HII and HIII5e-26118
NC_009663:2363841:236625023662502366816567Sulfurovum sp. NBC37-1, complete genomeribonuclease HII8e-26117
NC_009802:1886000:190289419028941903448555Campylobacter concisus 13826, complete genomeribonuclease HII7e-25114
NC_009091:1423677:142696614269661427583618Prochlorococcus marinus str. MIT 9301, complete genomeRibonuclease HII and HIII1e-24113
NC_008817:1476473:147977014797701480399630Prochlorococcus marinus str. MIT 9515, complete genomeRibonuclease HII and HIII4e-24111
NC_017367:1333811:135085313508531351467615Helicobacter pylori F57, complete genomeribonuclease HII5e-21101
NC_004432:1310322:133333713333371333993657Mycoplasma penetrans HF-2, complete genomeribonuclease HII2e-2099.4
NC_017371:1358000:137433113743311374936606Helicobacter pylori Gambia94/24 chromosome, complete genomeribonuclease HII2e-2099.4
NC_012039:53497:697776977770328552Campylobacter lari RM2100, complete genomeribonuclease HII8e-2097.4
NC_017368:1300000:131619513161951316809615Helicobacter pylori F16, complete genomeribonuclease HII1e-1997.1
NC_000921:1343701:136104413610441361673630Helicobacter pylori J99, complete genomeRIBONUCLEASE HII1e-1997.1
NC_017375:1317398:133440213344021335016615Helicobacter pylori 83 chromosome, complete genomeribonuclease HII2e-1996.7
NC_017361:1303553:132086413208641321478615Helicobacter pylori SouthAfrica7 chromosome, complete genomeribonuclease HII2e-1996.3
NC_017063:1362000:137820513782051378819615Helicobacter pylori ELS37 chromosome, complete genomeribonuclease HII3e-1995.9
NC_014560:1309470:132667113266711327285615Helicobacter pylori SJM180 chromosome, complete genomeribonuclease HII3e-1995.5
NC_017365:77150:806418064181255615Helicobacter pylori F30, complete genomeribonuclease HII2e-1892.8
NC_017358:1342000:135799313579931358607615Helicobacter pylori Cuz20 chromosome, complete genomeribonuclease HII4e-1891.7
NC_008229:118000:121877121877122458582Helicobacter acinonychis str. Sheeba, complete genomehypothetical protein1e-1790.5
NC_014643:1986440:199734719973471998141795Rothia dentocariosa ATCC 17931 chromosome, complete genomeribonuclease HII2e-1686.3
NC_013949:1163456:118097911809791181710732Helicobacter mustelae 12198 chromosome, complete genomeribonuclease HII4e-1582
NC_017376:1324000:134039213403921341006615Helicobacter pylori SNT49 chromosome, complete genomeribonuclease HII3e-1582
NC_017372:1373766:139074313907431391357615Helicobacter pylori India7 chromosome, complete genomeribonuclease HII6e-1581.3
NC_004463:8401060:842780784278078428142336Bradyrhizobium japonicum USDA 110, complete genomesimilar to ribonuclease HII9e-1580.9
NC_011498:1345623:136275713627571363371615Helicobacter pylori P12, complete genomeribonuclease hII9e-1580.5
NC_014644:1456689:148495714849571485640684Gardnerella vaginalis ATCC 14019 chromosome, complete genomeribonuclease HII8e-1477.4
NC_014471:1153438:115453611545361155234699Ignisphaera aggregans DSM 17230 chromosome, complete genomeribonuclease HII3e-0962.4
NC_017355:1299874:131698513169851317449465Helicobacter pylori v225d chromosome, complete genomeRibonuclease HII6e-0961.2
NC_015931:1653604:166140016614001662104705Pyrolobus fumarii 1A, complete genomeribonuclease HII2e-0859.3
NC_013849:1396051:141049714104971411132636Ferroglobus placidus DSM 10642 chromosome, complete genomeribonuclease HII3e-0755.8
NC_013926:920279:920279920279920917639Aciduliprofundum boonei T469 chromosome, complete genomeribonuclease HII2e-0652.8
NC_009637:602079:624020624020624739720Methanococcus maripaludis C7 chromosome, complete genomeribonuclease HII3e-0652.4
NC_015847:1418036:143996714399671440695729Methanococcus maripaludis XI chromosome, complete genomeribonuclease HII3e-0652.4
NC_005791:1334880:135564513556451356373729Methanococcus maripaludis S2, complete genomeRibonuclease HII4e-0652