Pre_GI: BLASTP Hits

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Query: NC_020134:205000:222919 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 222919, End: 224586, Length: 1668

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011830:3081726:3088092308809230894891398Desulfitobacterium hafniense DCB-2, complete genomepeptidase M56 BlaR11e-76287
NC_019897:763412:777767777767778588822Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein9e-57221
NC_007907:1996194:2003205200320520042121008Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-50201
NC_011295:1263500:1281797128179712842472451Coprothermobacter proteolyticus DSM 5265, complete genomepeptidase, M56 family protein2e-39164
NC_014377:321949:3262133262133275591347Thermosediminibacter oceani DSM 16646 chromosome, complete genomepeptidase M56 BlaR19e-27122
NC_020291:1266885:1284041128404112863442304Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomepeptidase M56, BlaR12e-24114
NC_009617:1255762:1274011127401112763202310Clostridium beijerinckii NCIMB 8052 chromosome, complete genomepeptidase M56, BlaR12e-23111
NC_014721:508000:5084625084625112332772Caldicellulosiruptor kristjanssonii 177R1B chromosome, completepeptidase m56 blar18e-21102
NC_015977:3215770:3266112326611232679081797Roseburia hominis A2-183 chromosome, complete genomeBeta-lactamase1e-1998.6
NC_014376:3593500:3594074359407435958731800Clostridium saccharolyticum WM1 chromosome, complete genomeBeta-lactamase1e-1998.2
NC_016048:4163225:4179570417957041809371368Oscillibacter valericigenes Sjm18-20, complete genomepeptidase M56 family protein2e-1894.7
NC_013406:1145268:1153996115399611558731878Paenibacillus sp. Y412MC10 chromosome, complete genomepeptidase M56 BlaR18e-1789
NC_016935:3103430:3106187310618731079861800Paenibacillus mucilaginosus 3016 chromosome, complete genomeregulatory protein BlaR13e-1687.4
NC_010337:2848360:2854407285440728566232217Heliobacterium modesticaldum Ice1, complete genomepeptidase m56, blar1 domain protein3e-1687.4
NC_016584:487613:5036925036925057312040Desulfosporosinus orientis DSM 765 chromosome, complete genomeantirepressor regulating drug resistance protein3e-1687.4
NC_016584:138348:1574701574701593561887Desulfosporosinus orientis DSM 765 chromosome, complete genomeexopolysaccharide biosynthesis protein2e-1687.4
NC_015690:2553837:2556660255666025584591800Paenibacillus mucilaginosus KNP414 chromosome, complete genomeregulatory protein BlaR11e-1585.5
NC_016627:4270949:4285191428519142878122622Clostridium clariflavum DSM 19732 chromosome, complete genomeantirepressor regulating drug resistance protein2e-1584.7
NC_016048:4047922:4082644408264440842061563Oscillibacter valericigenes Sjm18-20, complete genomepeptidase M56 family protein5e-1583.2
NC_009012:1901492:1920800192080019230642265Clostridium thermocellum ATCC 27405, complete genomepeptidase M56, BlaR18e-1582.4
NC_016627:4159406:4167873416787341694801608Clostridium clariflavum DSM 19732 chromosome, complete genomeantirepressor regulating drug resistance protein1e-1481.6
NC_016048:3063888:3071623307162330727801158Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-1378.2
NC_010337:2848360:2866244286624428683972154Heliobacterium modesticaldum Ice1, complete genomepeptidase m56, blar1 domain protein8e-1375.9
NC_021184:207492:2191412191412213722232Desulfotomaculum gibsoniae DSM 7213, complete genomeantirepressor regulating drug resistance protein4e-1066.6
NC_005125:3158667:3176193317619331781481956Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-1066.6
NC_010995:1139867:1155076115507611565901515Cellvibrio japonicus Ueda107, complete genomepeptidase, M56 family5e-0859.7
NC_013893:1723939:1722192172219217239491758Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeBeta-lactamase regulatory sensor-transducer BlaR14e-0653.5
NC_017347:2724313:2724313272431327260701758Staphylococcus aureus subsp. aureus T0131 chromosome, completeBlaR14e-0653.5