Pre_GI: BLASTP Hits

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Query: NC_020134:205000:219469 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 219469, End: 220926, Length: 1458

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014388:55903:5660356603580691467Butyrivibrio proteoclasticus B316 chromosome 2, complete genomesugar ABC transporter substrate-binding protein2e-87323
NC_016935:4117485:4213319421331942149531635Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-24115
NC_015690:4361000:4447186444718644488201635Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-24114
NC_009328:1867971:1876034187603418776771644Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein2e-24114
NC_015690:1818333:1827340182734018288901551Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-24113
NC_016935:2347691:2357210235721023587601551Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-24113
NC_014915:1880748:1892356189235618940051650Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 11e-23111
NC_013411:2739989:2752418275241827540671650Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 11e-23111
NC_014479:736102:7497697497697513101542Bacillus subtilis subsp. spizizenii str. W23 chromosome, completelipoprotein3e-23110
NC_016935:2347691:2403704240370424054431740Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-23109
UCMB5137:303641:3193183193183208411524Bacillus atrophaeus UCMB-5137lipoprotein5e-23109
NC_000964:764118:7788667788667803741509Bacillus subtilis subsp. subtilis str. 168, complete genomelipoprotein4e-23109
NC_015690:1818333:1874016187401618756681653Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-22108
NC_017195:742298:7570477570477585551509Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completelipoprotein LplA1e-22108
NC_019896:3281193:3283105328310532846131509Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeLipoprotein LplA1e-22108
NC_015690:4592582:4612557461255746141311575Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-22108
NC_014976:2981777:2997425299742529989331509Bacillus subtilis BSn5 chromosome, complete genomelipoprotein6e-23108
NC_014639:227118:2408102408102423331524Bacillus atrophaeus 1942 chromosome, complete genomelipoprotein1e-22107
CP002207:227118:2408102408102423331524Bacillus atrophaeus 1942, complete genomelipoprotein1e-22107
NC_013406:3819577:3842729384272938443961668Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-22107
NC_013406:5066769:5112003511200351135981596Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-22107
NC_003305:1:1636016360179281569Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein [sugar]4e-22106
NC_016047:876875:8925298925298940371509Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completelipoprotein LplA6e-22105
NC_013406:3851877:3867011386701138687111701Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-21105
NC_016935:1306472:1327748132774813293731626Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-21102
NC_015690:3883243:3902653390265339042781626Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-21102
NC_016935:1365463:1367350136735013690141665Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein3e-1894
NC_015690:3941113:3942182394218239438461665Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein2e-1894
NC_010001:986500:1001005100100510025761572Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 13e-1893.6
NC_016935:4326644:4333504433350443350871584Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-1790.5
NC_015690:4592582:4617476461747646189781503Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-1790.5
NC_014652:163347:1770881770881787071620Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 13e-1687
NC_016935:2567039:2624595262459526261061512Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative multiple sugar transport system substrate-binding protein YtcQ3e-1687
NC_014652:1651671:1655312165531216569461635Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 15e-1686.3
NC_015690:2039215:2075053207505320765641512Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative multiple sugar transport system substrate-binding protein YtcQ6e-1685.9
NC_016935:5017317:5032020503202050336031584Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-1685.9
NC_015690:5263108:5277813527781352793961584Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-1685.5
NC_010001:615427:6154276154276171031677Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 11e-1585.1
NC_019897:1224798:1264380126438012660081629Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-1584
NC_016935:1365463:1431909143190914335161608Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative sugar ABC transporter7e-1582.4
NC_013406:5066769:5070236507023650718521617Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein8e-1582
NC_016641:3711972:3715558371555837172491692Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein1e-1481.6
NC_015690:3941113:4012501401250140141081608Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative sugar ABC transporter2e-1481.3
NC_013406:3583474:3586825358682535884531629Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-1376.3
NC_016582:10227196:1023986110239861102413931533Streptomyces bingchenggensis BCW-1 chromosome, complete genomeextracellular solute-binding protein1e-1274.7
NC_013406:3583474:3619295361929536208961602Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-1273.6
NC_020210:1908000:1915324191532419170361713Geobacillus sp. GHH01, complete genomesugar ABC transporter substrate-binding protein4e-1273.2
NC_014720:154111:1804561804561820361581Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 14e-1273.2
NC_004193:3325612:3341057334105733426911635Oceanobacillus iheyensis HTE831, complete genomehypothetical protein8e-1272.4
NC_015690:1929599:1956367195636719579831617Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-1272.4
NC_016935:2460795:2487578248757824891941617Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-1272.4
NC_015732:684000:6981306981306997161587Spirochaeta caldaria DSM 7334 chromosome, complete genomeextracellular solute-binding protein family 11e-1172
NC_013526:105195:1131991131991142991101Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 11e-1171.6
NC_006087:237500:2634602634602646291170Leifsonia xyli subsp. xyli str. CTCB07, complete genomemaltose/trehalose porter3e-1170.1
NC_014392:1935130:1937088193708819386831596Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 13e-1170.1
NC_014657:1775929:1792442179244217940371596Caldicellulosiruptor owensensis OL chromosome, complete genomeextracellular solute-binding protein family 13e-1170.1
NC_016641:1369424:1370725137072513719181194Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-1168.9
NC_013521:302574:3069633069633085761614Sanguibacter keddieii DSM 10542, complete genomeABC-type sugar transport system, periplasmic component8e-1168.9
NC_019970:929666:9337029337029353751674Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family1e-1068.6
NC_016641:3711972:3726839372683937284461608Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-1066.2
NC_015588:2281354:2289171228917122907871617Isoptericola variabilis 225 chromosome, complete genomeextracellular solute-binding protein family 14e-1066.2
NC_013406:4478000:4481653448165344833321680Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0964.7
NC_017179:2895571:2895571289557128968451275Clostridium difficile BI1, complete genomeextracellular solute-binding protein2e-0964.3
NC_013315:2887559:2887559288755928888331275Clostridium difficile CD196 chromosome, complete genomeextracellular solute-binding protein2e-0964.3
NC_013316:2968000:2968117296811729693911275Clostridium difficile R20291, complete genomeputative extracellular solute-binding protein2e-0964.3
NC_015152:2831566:2851234285123428528051572Spirochaeta sp. Buddy chromosome, complete genomeextracellular solute-binding protein family 12e-0963.9
NC_009617:4436837:4459569445956944611851617Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular solute-binding protein6e-0962.8
NC_015555:1792242:1804740180474018064071668Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeextracellular solute-binding protein family 16e-0962.8
NC_016935:4233223:4262426426242642640811656Paenibacillus mucilaginosus 3016 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-0962.4
NC_015690:4469775:4508042450804245096971656Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-0962.4
NC_014410:989698:9937249937249953971674Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 19e-0962
NC_014206:1745203:1759149175914917608191671Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0860.8
NC_014392:2350577:2351618235161823532641647Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeextracellular solute-binding protein family 13e-0860.5
NC_015690:1967244:2005630200563020071381509Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-0860.5
NC_014410:989698:1010411101041110120871677Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 11e-0758.5
NC_015690:7785875:7785875778587577872091335Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0757.4
NC_013411:2767400:2781619278161927829831365Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 13e-0757
NC_014915:1909275:1921556192155619229171362Geobacillus sp. Y412MC52 chromosome, complete genomeextracellular solute-binding protein family 13e-0757
NC_014720:383587:4059244059244075701647Caldicellulosiruptor kronotskyensis 2002 chromosome, completeextracellular solute-binding protein family 15e-0756.2
NC_011593:391297:3971513971513985601410Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,family 1 extracellular solute-binding protein5e-0756.2
NC_017219:391100:3969663969663983541389Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative ABC transporter substrate binding component6e-0756.2
NC_019897:1224798:1232541123254112338751335Thermobacillus composti KWC4 chromosome, complete genomesugar ABC transporter substrate-binding protein2e-0654.3
NC_013521:302574:3359023359023371611260Sanguibacter keddieii DSM 10542, complete genomeABC-type sugar transport system, periplasmic component3e-0653.9
NC_015671:874500:8980898980898994231335Cellvibrio gilvus ATCC 13127 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0652.8
NC_004460:1313468:1337845133784513389751131Vibrio vulnificus CMCP6 chromosome II, complete sequenceperiplasmic maltose-binding protein5e-0652.8
NC_016582:11820671:1182934511829345118309371593Streptomyces bingchenggensis BCW-1 chromosome, complete genomeextracellular solute-binding protein7e-0652.4
NC_015436:440033:4482914482914498201530Spirochaeta coccoides DSM 17374 chromosome, complete genomeextracellular solute-binding protein family 19e-0652