Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:205000:216577 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 216577, End: 216900, Length: 324

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009464:379377:405172405172405516345Uncultured methanogenic archaeon RC-I, complete genomepredicted rhodanese-like protein1e-1272
NC_018691:2863659:288791128879112888573663Alcanivorax dieselolei B5 chromosome, complete genomeRhodanese-like protein9e-1268.9
NC_016628:935420:946272946272946970699Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator6e-1166.2
NC_013406:4023367:403406540340654034742678Paenibacillus sp. Y412MC10 chromosome, complete genomeArsR family transcriptional regulator7e-1062.8
NC_015422:3513689:353075335307533531418666Alicycliphilus denitrificans K601 chromosome, complete genomeRhodanese-like protein2e-0857.8
NC_006350:1938631:196467619646761965008333Burkholderia pseudomallei K96243 chromosome 1, complete sequence3e-0857
NC_007498:1072112:107843610784361079095660Pelobacter carbinolicus DSM 2380, complete genomeArsR family transcriptional regulator6e-0856.2
CP002207:3584000:359744135974413598097657Bacillus atrophaeus 1942, complete genomeArsR family transcriptional regulator1e-0755.1
NC_014639:3584000:359744135974413598097657Bacillus atrophaeus 1942 chromosome, complete genomeArsR family transcriptional regulator1e-0755.1
NC_019842:484933:498564498564499220657Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,arsR family transcriptional regulator3e-0754.3
NC_012962:3933715:398134039813403982011672Photorhabdus asymbiotica, complete genomeTranscriptional regulator4e-0753.5
NC_008789:707916:726020726020726676657Halorhodospira halophila SL1, complete genomeRhodanese domain protein5e-0753.1
NC_013892:3745749:376138637613863762069684Xenorhabdus bovienii SS-2004 chromosome, complete genometranscriptional regulator, ArsR family/rhodanese-like domain protein8e-0752.4
NC_015759:726612:739630739630740280651Weissella koreensis KACC 15510 chromosome, complete genomeputative transcriptional regulator1e-0651.6
NC_012440:1080675:109974410997441100151408Persephonella marina EX-H1, complete genomerhodanese domain protein1e-0651.6
NC_020244:2509000:252334025233402523681342Bacillus subtilis XF-1, complete genomehypothetical protein2e-0651.6
NC_015949:1887478:1903596190359619052841689Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-0650.8