Pre_GI: BLASTP Hits

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Query: NC_020134:205000:215390 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 215390, End: 216313, Length: 924

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015416:1039144:104021210402121041177966Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein6e-25114
NC_013741:1068170:1086027108602710874151389Archaeoglobus profundus DSM 5631, complete genomeRadical SAM domain protein3e-22105
NC_018870:2537350:2547893254789325489151023Thermacetogenium phaeum DSM 12270 chromosome, complete genomecoenzyme PQQ synthesis protein E2e-21103
NC_014844:1773424:1786864178686417879161053Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein4e-21102
NC_018876:2380018:2394099239409923951541056Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein6e-21101
NC_013939:1460142:1471512147151214725761065Deferribacter desulfuricans SSM1, complete genomeradical SAM domain protein7e-21101
NC_003552:661579:6772296772296782781050Methanosarcina acetivorans C2A, complete genomeheme d1 biosynthesis protein NirJ3e-2099.4
NC_012622:940990:9590429590429601781137Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein1e-1997.1
NC_012623:1631985:1631985163198516331211137Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein1e-1997.1
NC_019977:828427:8429508429508441071158Methanomethylovorans hollandica DSM 15978, complete genomeputative heme d1 biosynthesis radical SAM protein NirJ24e-1995.5
NC_008701:37219:4525245252464211170Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-1893.6
NC_002754:1661000:1665410166541016665461137Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-4)7e-1891.7
NC_012623:1631985:1633094163309416341461053Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein2e-1790.1
NC_012622:940990:9580179580179590691053Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein2e-1790.1
NC_002754:1661000:1666519166651916675711053Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-5)7e-1788.2
NC_015589:1630461:165416316541631655155993Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRadical SAM domain-containing protein1e-1687.4
NC_014314:404315:4219644219644231091146Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein4e-1582
NC_011832:2760000:2769856276985627709321077Candidatus Methanosphaerula palustris E1-9c, complete genomeRadical SAM domain protein4e-1479
NC_009033:653462:6708496708496723691521Staphylothermus marinus F1, complete genomeRadical SAM domain protein4e-1479
NC_013665:849508:8828538828538839801128Methanocella paludicola SANAE, complete genomehypothetical protein1e-1273.6
NC_018691:2810949:2832067283206728331581092Alcanivorax dieselolei B5 chromosome, complete genomeCoenzyme PQQ synthesis protein E3e-1272.8
NC_007298:1824335:1828630182863018297571128Dechloromonas aromatica RCB, complete genomeCoenzyme PQQ biosynthesis protein E9e-1271.2
NC_020389:1777409:179374717937471794421675Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein2e-1170.1
NC_014219:1736000:1758158175815817592761119Bacillus selenitireducens MLS10 chromosome, complete genomeRadical SAM domain protein8e-1168.2
NC_009778:2951207:2950074295007429512101137Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1067.4
NC_013282:923500:9408649408649420001137Cronobacter turicensis, complete genomeCoenzyme PQQ synthesis protein E1e-1067.4
NC_014220:2037560:2037560203756020389151356Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRadical SAM domain protein3e-1066.2
NC_018645:4490957:4499339449933945003911053Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein6e-1065.1
NC_014960:1735786:1753105175310517545201416Anaerolinea thermophila UNI-1, complete genomehypothetical protein8e-1064.7
NC_015379:2482901:2498872249887225000411170Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,coenzyme PQQ synthesis protein E4e-0962.4
NC_015379:6226661:6262271626227162634401170Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,coenzyme PQQ synthesis protein E4e-0962.4
NC_014387:2297304:2314241231424123156411401Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeradical SAM domain-containing protein7e-0961.6
NC_019977:828427:8457208457208469041185Methanomethylovorans hollandica DSM 15978, complete genomeputative Fe-S oxidoreductase9e-0961.2
NC_021182:300415:3140133140133153921380Clostridium pasteurianum BC1, complete genomeputative Fe-S oxidoreductase2e-0859.7
NC_015172:1471501:1473392147339214747351344Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRadical SAM domain protein3e-0859.3
NC_007643:889755:8969628969628980261065Rhodospirillum rubrum ATCC 11170, complete genomeRadical SAM4e-0859.3
NC_012470:1946968:1963790196379019649081119Streptococcus equi subsp. zooepidemicus, complete genomeRadical SAM superfamily protein4e-0858.9
NC_013855:1268424:1290168129016812912861119Azospirillum sp. B510 plasmid pAB510a, complete sequencepyrroloquinoline quinone biosynthesis protein E4e-0858.9
NC_020304:129321:1501321501321511661035Desulfocapsa sulfexigens DSM 10523, complete genomeradical SAM additional 4Fe4S-binding domain-containing protein5e-0858.5
NC_012563:122000:1354321354321368141383Clostridium botulinum A2 str. Kyoto, complete genomeradical SAM domain protein8e-0858.2
NC_010516:127000:1412891412891426711383Clostridium botulinum B1 str. Okra, complete genomeradical SAM domain protein8e-0858.2
NC_009495:128000:1414961414961428781383Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeradical SAM domain protein8e-0858.2
NC_009697:120117:1342991342991356811383Clostridium botulinum A str. ATCC 19397 chromosome, completeradical SAM domain-containing protein8e-0858.2
NC_009698:120119:1343011343011356831383Clostridium botulinum A str. Hall chromosome, complete genomeradical SAM domain-containing protein8e-0858.2
NC_009699:122000:1363051363051376871383Clostridium botulinum F str. Langeland chromosome, complete genomeradical SAM domain-containing protein8e-0858.2
NC_017297:122383:1365701365701379521383Clostridium botulinum F str. 230613 chromosome, complete genomeradical SAM domain-containing protein8e-0858.2
NC_008825:2761499:2761499276149927627431245Methylibium petroleiphilum PM1, complete genomecoenzyme PQQ synthesis protein E7e-0858.2
NC_012658:125500:1389411389411403231383Clostridium botulinum Ba4 str. 657 chromosome, complete genomeradical SAM domain-containing protein1e-0757.8
NC_014500:1862000:1896102189610218975291428Dickeya dadantii 3937 chromosome, complete genomeRadical SAM domain heme biosynthesis protein2e-0757
NC_018870:2537350:254669025466902547640951Thermacetogenium phaeum DSM 12270 chromosome, complete genomeradical SAM domain-containing protein3e-0756.2
NC_014314:404315:4207894207894219671179Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein3e-0756.2
NC_020389:1777409:179664317966431797062420Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein3e-0755.8
NC_014391:4617688:4634310463431046355331224Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeradical SAM domain-containing protein4e-0755.8
NC_015519:2580310:2580310258031025816651356Tepidanaerobacter sp. Re1 chromosome, complete genomeRadical SAM domain-containing protein4e-0755.5
NC_014623:9363409:9368610936861093696291020Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeradical sam domain-containing protein5e-0652
NC_014219:1736000:1736116173611617372521137Bacillus selenitireducens MLS10 chromosome, complete genomeRadical SAM domain protein5e-0652