Pre_GI: BLASTP Hits

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Query: NC_020134:205000:212816 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 212816, End: 214189, Length: 1374

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013741:1068170:1086027108602710874151389Archaeoglobus profundus DSM 5631, complete genomeRadical SAM domain protein1e-27124
NC_015589:1630461:165416316541631655155993Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRadical SAM domain-containing protein4e-25116
NC_009033:653462:6708496708496723691521Staphylothermus marinus F1, complete genomeRadical SAM domain protein1e-24114
NC_018876:2380018:2394099239409923951541056Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein2e-23110
NC_013939:1460142:1471512147151214725761065Deferribacter desulfuricans SSM1, complete genomeradical SAM domain protein2e-22107
NC_003552:661579:6772296772296782781050Methanosarcina acetivorans C2A, complete genomeheme d1 biosynthesis protein NirJ2e-22107
NC_019977:828427:8429508429508441071158Methanomethylovorans hollandica DSM 15978, complete genomeputative heme d1 biosynthesis radical SAM protein NirJ25e-22105
NC_015416:1039144:104021210402121041177966Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein1e-21104
NC_014314:404315:4219644219644231091146Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein3e-20100
NC_010814:3332088:3341308334130833423721065Geobacter lovleyi SZ, complete genomeRadical SAM domain protein1e-1894.7
NC_012470:1946968:1963790196379019649081119Streptococcus equi subsp. zooepidemicus, complete genomeRadical SAM superfamily protein2e-1894
NC_012622:940990:9580179580179590691053Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein4e-1893.2
NC_012623:1631985:1633094163309416341461053Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein4e-1893.2
NC_012623:1631985:1631985163198516331211137Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein5e-1892.8
NC_012622:940990:9590429590429601781137Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein5e-1892.8
NC_014206:2912945:2915986291598629171041119Geobacillus sp. C56-T3 chromosome, complete genomeradical SAM protein1e-1791.3
NC_021171:1661923:1677549167754916787181170Bacillus sp. 1NLA3E, complete genomeradical SAM protein2e-1790.9
NC_018870:2537350:2547893254789325489151023Thermacetogenium phaeum DSM 12270 chromosome, complete genomecoenzyme PQQ synthesis protein E2e-1790.5
NC_014915:727631:7408457408457419631119Geobacillus sp. Y412MC52 chromosome, complete genomeRadical SAM domain protein5e-1789.4
NC_013411:1587689:1600903160090316020211119Geobacillus sp. Y412MC61, complete genomeRadical SAM domain protein5e-1789.4
NC_002754:1661000:1665410166541016665461137Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-4)7e-1789
NC_014219:1736000:1758158175815817592761119Bacillus selenitireducens MLS10 chromosome, complete genomeRadical SAM domain protein7e-1685.5
NC_018870:2537350:254669025466902547640951Thermacetogenium phaeum DSM 12270 chromosome, complete genomeradical SAM domain-containing protein6e-1582.4
NC_014844:1773424:1786864178686417879161053Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein7e-1582.4
NC_002754:1661000:1666519166651916675711053Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-5)9e-1582
NC_014830:3156873:3156873315687331580931221Intrasporangium calvum DSM 43043 chromosome, complete genomeRadical SAM domain protein4e-1479.7
NC_014960:1735786:1753105175310517545201416Anaerolinea thermophila UNI-1, complete genomehypothetical protein5e-1479.3
NC_015873:1193843:1203710120371012050201311Megasphaera elsdenii DSM 20460, complete genomehypothetical protein9e-1478.6
NC_015320:790137:8092578092578104171161Archaeoglobus veneficus SNP6 chromosome, complete genomeRadical SAM domain-containing protein1e-1378.2
NC_013174:23421:5606456064572241161Jonesia denitrificans DSM 20603, complete genomeRadical SAM domain protein5e-1375.9
NC_014219:1736000:1736116173611617372521137Bacillus selenitireducens MLS10 chromosome, complete genomeRadical SAM domain protein1e-1275.1
NC_011126:281926:3003313003313014071077Hydrogenobaculum sp. Y04AAS1, complete genomeRadical SAM domain protein1e-1274.7
NC_013665:849508:8828538828538839801128Methanocella paludicola SANAE, complete genomehypothetical protein2e-1274.3
NC_011832:2760000:2769856276985627709321077Candidatus Methanosphaerula palustris E1-9c, complete genomeRadical SAM domain protein3e-1273.6
NC_013665:849508:8817538817538828531101Methanocella paludicola SANAE, complete genomehypothetical protein3e-1170.1
NC_014507:2479221:2494030249403024950611032Methanoplanus petrolearius DSM 11571 chromosome, complete genomeRadical SAM domain-containing protein6e-1169.3
NC_020304:129321:1501321501321511661035Desulfocapsa sulfexigens DSM 10523, complete genomeradical SAM additional 4Fe4S-binding domain-containing protein1e-1068.2
NC_020389:1777409:179664317966431797062420Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein2e-1067.4
NC_008553:329458:3473143473143483931080Methanosaeta thermophila PT, complete genomeRadical SAM domain protein8e-0962
NC_015164:1877981:1890970189097018920491080Bacteroides salanitronis DSM 18170 chromosome, complete genomeRadical SAM domain-containing protein3e-0860.5
NC_018876:2380018:2396813239681323980031191Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein7e-0858.9
NC_014623:9363409:9368610936861093696291020Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeradical sam domain-containing protein1e-0758.5
NC_020389:1777409:179374717937471794421675Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein3e-0757
NC_018645:4490957:4499339449933945003911053Desulfobacula toluolica Tol2, complete genomeradical SAM domain-containing protein3e-0757
NC_012632:87590:1020641020641030981035Sulfolobus islandicus M.16.27 chromosome, complete genomeradical SAM protein4e-0756.6
NC_012588:87592:1008541008541018881035Sulfolobus islandicus M.14.25 chromosome, complete genomeradical SAM protein4e-0756.6
NC_012589:87592:1008541008541018881035Sulfolobus islandicus L.S.2.15, complete genomeRadical SAM domain protein4e-0756.6
NC_013769:87582:1008601008601018941035Sulfolobus islandicus L.D.8.5 chromosome, complete genomeradical SAM protein4e-0756.6
NC_017276:85380:1027421027421037761035Sulfolobus islandicus REY15A chromosome, complete genomeradical SAM protein5e-0756.2
NC_012470:1370418:1380446138044613814771032Streptococcus equi subsp. zooepidemicus, complete genomeradical SAM superfamily protein5e-0756.2
NC_007681:696252:7141157141157152871173Methanosphaera stadtmanae DSM 3091, complete genomepredicted arylsulfatase regulatory protein3e-0653.9