Pre_GI: BLASTP Hits

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Query: NC_020134:205000:207280 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 207280, End: 208380, Length: 1101

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016012:396910:4122264122264138271602Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeputative peptidase M286e-1892
NC_011772:5222917:5239866523986652412661401Bacillus cereus G9842, complete genomeputative aminopeptidase3e-1789.7
NC_006274:5155395:5168746516874651701461401Bacillus cereus E33L, complete genomeaminopeptidase4e-1789.4
NC_005957:5091150:5104300510430051057001401Bacillus thuringiensis serovar konkukian str. 97-27, completeaminopeptidase4e-1789.4
NC_012472:5126186:5139290513929051406901401Bacillus cereus 03BB102, complete genomeputative aminopeptidase4e-1789.4
NC_016779:5079460:5092574509257450939741401Bacillus cereus F837/76 chromosome, complete genomeaminopeptidase Y4e-1789.4
NC_011969:5063283:5076570507657050779701401Bacillus cereus Q1 chromosome, complete genomeaminopeptidase4e-1789.4
NC_008600:5113765:5126840512684051282791440Bacillus thuringiensis str. Al Hakam, complete genomeaminopeptidase4e-1789.4
NC_011773:5144990:5158619515861951600191401Bacillus cereus AH820 chromosome, complete genomeputative aminopeptidase4e-1789
NC_014335:5038601:5051994505199450533941401Bacillus cereus biovar anthracis str. CI chromosome, completeaminopeptidase6e-1788.6
NC_010184:5120359:5123472512347251248691398Bacillus weihenstephanensis KBAB4, complete genomepeptidase M282e-1687
NC_017208:5339331:5353184535318453545841401Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeaminopeptidase Y2e-1687
NC_012581:5085915:5098570509857050999701401Bacillus anthracis str. CDC 684 chromosome, complete genomeputative aminopeptidase5e-1685.9
NC_009953:1581088:1581088158108815826471560Salinispora arenicola CNS-205 chromosome, complete genomeaminopeptidase Y1e-1481.3
NC_010718:2551000:2571967257196725737211755Natranaerobius thermophilus JW/NM-WN-LF, complete genomepeptidase M284e-1479.3
NC_008255:32455:4050140501416851185Cytophaga hutchinsonii ATCC 33406, complete genomeaminopeptidase2e-1377
NC_005125:2811986:2818205281820528195391335Gloeobacter violaceus PCC 7421, complete genomeprobable aminopeptidase5e-1375.9
NC_013947:1665994:169184116918411692716876Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidase M288e-1375.1
NC_013967:1687825:1708769170876917101031335Haloferax volcanii DS2 chromosome, complete genomeaminopeptidase3e-1273.2
NC_015144:367278:3867013867013878371137Weeksella virosa DSM 16922 chromosome, complete genomepeptidase M281e-1171.2
NC_008536:1778500:1785573178557317873961824Solibacter usitatus Ellin6076, complete genomepeptidase M283e-1169.7
NC_013958:29548:4612346123471241002Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequencepeptidase M283e-1169.7
NC_013757:1212308:1242465124246512439101446Geodermatophilus obscurus DSM 43160, complete genomeAminopeptidase Y3e-1169.7
NC_014623:4740221:4740221474022147430042784Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepeptidase m281e-1067.4
NC_014655:17641:3535835358365121155Leadbetterella byssophila DSM 17132 chromosome, complete genomepeptidase m283e-1066.6
NC_013061:1856969:1872305187230518735791275Pedobacter heparinus DSM 2366, complete genomepeptidase M286e-1065.5
NC_010943:325739:3472673472673489191653Stenotrophomonas maltophilia K279a, complete genomeputative peptidase6e-1065.5
NC_015947:280095:3031283031283047801653Burkholderia sp. JV3 chromosome, complete genomepeptidase M287e-1065.1
NC_020126:5152359:5167590516759051703912802Myxococcus stipitatus DSM 14675, complete genomeM28 family peptidase8e-1065.1
NC_009092:3057319:3057319305731930589051587Shewanella loihica PV-4, complete genomepeptidase M283e-0963.2
NC_016012:1312352:1323613132361313250881476Candidatus Arthromitus sp. SFB-rat-Yit, complete genomepeptidase M284e-0962.8
NC_010162:12652197:1265219712652197126542512055Sorangium cellulosum 'So ce 56', complete genomehypothetical protein5e-0962.4
NC_015846:1395358:1419677141967714207021026Capnocytophaga canimorsus Cc5 chromosome, complete genomeputative leucine aminopeptidase4e-0859.3
NC_009800:2889928:2894000289400028950371038Escherichia coli HS, complete genomealkaline phosphatase isozyme conversion peptidase5e-0858.9
NC_010468:1029471:1046266104626610473031038Escherichia coli ATCC 8739, complete genomepeptidase M285e-0858.9
NC_010473:2963951:2967145296714529681821038Escherichia coli str. K-12 substr. DH10B, complete genomeaminopeptidase in alkaline phosphatase isozyme conversion5e-0858.9
AC_000091:2872000:2875237287523728762741038Escherichia coli W3110 DNA, complete genomeaminopeptidase in alkaline phosphatase isozyme conversion5e-0858.9
NC_000913:2873443:2874603287460328756401038Escherichia coli K12, complete genomeaminopeptidase in alkaline phosphatase isozyme conversion5e-0858.9
NC_012759:2757826:2760415276041527614521038Escherichia coli BW2952 chromosome, complete genomealkaline phosphatase isozyme conversion aminopeptidase5e-0858.9
NC_018748:1842400:1842400184240018438811482Emticicia oligotrophica DSM 17448 chromosome, complete genomepeptidase M281e-0758.2
NC_009614:2431005:2435223243522324362421020Bacteroides vulgatus ATCC 8482 chromosome, complete genomeaminopeptidase3e-0756.2
NC_011146:63912:6508765087660941008Geobacter bemidjiensis Bem, complete genomepeptidase M284e-0755.8
NC_014414:2467639:2469308246930824710681761Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein7e-0755.5
NC_020126:7372685:7373575737357573751851611Myxococcus stipitatus DSM 14675, complete genomeM28 family peptidase1e-0654.3
NC_013850:985331:1001752100175210028071056Klebsiella variicola At-22 chromosome, complete genomepeptidase M282e-0654.3
NC_017294:1385576:1400124140012414016021479Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomepeptidase M282e-0654.3
NC_015913:1422444:1433728143372814352061479Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein2e-0654.3
NC_015638:1914000:1922841192284119239291089Lacinutrix sp. 5H-3-7-4 chromosome, complete genomepeptidase M283e-0653.1
NC_015277:6213304:1263312633142131581Sphingobacterium sp. 21 chromosome, complete genomepeptidase M287e-0652