Pre_GI: BLASTP Hits

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Query: NC_020134:1941523:1956825 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1956825, End: 1958000, Length: 1176

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015634:2991669:3014642301464230157691128Bacillus coagulans 2-6 chromosome, complete genomecarboxynorspermidine decarboxylase3e-145514
NC_014484:371500:3727593727593739161158Spirochaeta thermophila DSM 6192 chromosome, complete genomecarboxynorspermidine decarboxylase5e-122437
NC_010995:1749054:1752186175218617534091224Cellvibrio japonicus Ueda107, complete genomecarboxynorspermidine decarboxylase1e-113409
NC_014935:918855:9326059326059337741170Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecarboxynorspermidine decarboxylase3e-108392
NC_009615:1067603:1089974108997410911131140Parabacteroides distasonis ATCC 8503 chromosome, complete genomecarboxynorspermidine decarboxylase5e-105381
NC_015510:8069440:8085347808534780864861140Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomecarboxynorspermidine decarboxylase2e-103375
NC_010655:2000025:2002974200297420041761203Akkermansia muciniphila ATCC BAA-835, complete genomecarboxynorspermidine decarboxylase1e-97357
NC_006347:2899653:2904955290495529060941140Bacteroides fragilis YCH46, complete genomecarboxynorspermidine decarboxylase1e-97356
NC_016776:2956444:2995893299589329970321140Bacteroides fragilis 638R, complete genomeputative carboxynorspermidine decarboxylase1e-97356
NC_003228:2973266:2978568297856829797071140Bacteroides fragilis NCTC 9343, complete genomeputative carboxynorspermidine decarboxylase1e-97356
NC_010729:265791:2844612844612855971137Porphyromonas gingivalis ATCC 33277, complete genomecarboxynorspermidine decarboxylase3e-91335
NC_015571:440605:4593424593424604781137Porphyromonas gingivalis TDC60, complete genomecarboxynorspermidine decarboxylase3e-91335
NC_002950:155873:1746111746111757471137Porphyromonas gingivalis W83, complete genomecarboxynorspermidine decarboxylase1e-90333
NC_015152:1602412:1623141162314116242561116Spirochaeta sp. Buddy chromosome, complete genomecarboxynorspermidine decarboxylase2e-79296
NC_005955:1540838:1553747155374715548441098Bartonella quintana str. Toulouse, complete genomeCarboxynorspermidine decarboxylase4e-67255
NC_005956:1888500:1901500190150019025971098Bartonella henselae str. Houston-1, complete genomeCarboxynorspermidine decarboxylase8e-66251
NC_008783:29972:3404934049351461098Bartonella bacilliformis KC583, complete genomecarboxynorspermidine decarboxylase1e-63244
NC_012846:2299282:2312231231223123133281098Bartonella grahamii as4aup, complete genomecarboxynorspermidine decarboxylase6e-64244
NC_003551:415803:4428174428174440341218Methanopyrus kandleri AV19, complete genomeDiaminopimelate decarboxylase9e-1065.1
NC_016012:104500:1227071227071239871281Candidatus Arthromitus sp. SFB-rat-Yit, complete genomediaminopimelate decarboxylase, lisA8e-0961.6
NC_020389:1936000:1939344193934419406061263Methanosarcina mazei Tuc01, complete genomeDiaminopimelate decarboxylase3e-0653.1