Pre_GI: BLASTP Hits

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Query: NC_020134:1783000:1799561 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1799561, End: 1800775, Length: 1215

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007613:3470314:350082135008213501468648Shigella boydii Sb227, complete genome2e-20100
NC_008258:3581583:359257435925743593220647Shigella flexneri 5 str. 8401, complete genome2e-1687
NC_004741:4132056:414096141409614141535575Shigella flexneri 2a str. 2457T, complete genome8e-1478.6
NC_007759:623116:640053640053640859807Syntrophus aciditrophicus SB, complete genomebeta-propeller domain of methanol dehydrogenase type protein1e-1790.9
NC_009699:564455:564455564455565315861Clostridium botulinum F str. Langeland chromosome, complete genomebeta-propeller domain-containing protein9e-22104
NC_017095:1927118:193707119370711937814744Fervidobacterium pennivorans DSM 9078 chromosome, complete genomebeta-propeller domain-containing protein, methanol dehydrogenase1e-32140
NC_008262:654000:659866659866660588723Clostridium perfringens SM101, complete genomecation transport ATPase yqgG9e-26118
NC_004193:79588:108544108544109242699Oceanobacillus iheyensis HTE831, complete genomecation-transporting ATPase1e-23111
NC_014614:260782:262425262425263273849Clostridium sticklandii, complete genomeconserved exported protein of unknown function4e-1892.8
NC_003198:3881221:388361338836133884308696Salmonella enterica subsp. enterica serovar Typhi str. CT18,conserved hyopthetical protein7e-1582
NC_005773:4539751:456429745642974564974678Pseudomonas syringae pv. phaseolicola 1448A, complete genomeDomain of unknown function (DUF477) family4e-0963.2
NC_007677:117625:134774134774135604831Salinibacter ruber DSM 13855, complete genomehypothetical protein2e-1997.1
NC_020210:2969862:299506229950622995739678Geobacillus sp. GHH01, complete genomehypothetical protein4e-1892.8
NC_012125:3879917:389773138977313898408678Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-1582
NC_014934:3786132:380457438045743805164591Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein2e-1170.9
NC_000853:960248:978912978912979628717Thermotoga maritima MSB8, complete genomehypothetical protein2e-29130
NC_014639:725577:740105740105740767663Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein2e-23110
NC_015167:1666000:166615816661581666670513Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein1e-0655.1
NC_011978:1581994:158369115836911584407717Thermotoga neapolitana DSM 4359, complete genomehypothetical protein2e-29130
NC_018704:81733:106292106292106987696Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein2e-23110
NC_012658:545840:557305557305558165861Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein1e-21104
NC_007498:2638671:265782626578262658533708Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein1e-20101
NC_008260:2142311:215668421566842157397714Alcanivorax borkumensis SK2, complete genomehypothetical protein1e-1997.8
NC_015422:2858228:285822828582282859112885Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein3e-1893.2
NC_015422:3493396:350939235093923510276885Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein4e-1376.3
NC_019897:73957:111616111616112362747Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein8e-30131
UCMB5137:808967:822816822816823478663Bacillus atrophaeus UCMB-5137hypothetical protein2e-23110
NC_017075:1233377:124732012473201248045726Rubrivivax gelatinosus IL144, complete genomehypothetical protein3e-21103
NC_012121:1676367:168005416800541680725672Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein7e-21102
NC_010376:606000:623855623855624694840Finegoldia magna ATCC 29328, complete genomehypothetical protein3e-1893.2
NC_010554:2872000:2886711288671128878891179Proteus mirabilis HI4320, complete genomehypothetical protein9e-1891.7
NC_002939:1601706:161824716182471619146900Geobacter sulfurreducens PCA, complete genomehypothetical protein1e-1687.8
NC_016002:1938749:195717319571731958036864Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein3e-1583.2
NC_016609:6361862:638239763823976383314918Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein4e-1272.8
NC_019897:3025871:304368730436873044415729Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein6e-30132
CP002207:725577:740105740105740767663Bacillus atrophaeus 1942, complete genomehypothetical protein2e-23110
NC_017297:564727:564727564727565587861Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein9e-22104
NC_014624:1369642:138427013842701384953684Eubacterium limosum KIST612 chromosome, complete genomemagnesium transporting ATPase protein C9e-1271.6
NC_009089:3935500:394606339460633946749687Clostridium difficile 630, complete genomeMagnesium transporting ATPase protein C1e-1274.3
NC_014041:4335948:435022643502264350672447Zunongwangia profunda SM-A87 chromosome, complete genomemembrane protein, MgtC4e-1375.9
NC_012947:248000:255783255783256430648Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeMg(2+) transport ATPase2e-21103
NC_013361:4566779:457602445760244576671648Escherichia coli O26:H11 str. 11368 chromosome, complete genomeMg(2+) transport ATPase3e-21103
NC_013353:4313462:432246543224654323112648Escherichia coli O103:H2 str. 12009, complete genomeMg(2+) transport ATPase inner membrane protein2e-21103
NC_017265:1715035:172385417238541724552699Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Mg(2+) transport ATPase protein C4e-1686.3
NC_003143:1880000:188742218874221888132711Yersinia pestis CO92, complete genomeMg(2+) transport ATPase protein C3e-1686.7
NC_005810:1976000:198368619836861984396711Yersinia pestis biovar Microtus str. 91001, complete genomeMg(2+) transport ATPase protein C9e-1788.2
NC_009381:2009842:202182520218252022523699Yersinia pestis Pestoides F chromosome, complete genomeMg(2+) transport ATPase protein C4e-1686.3
NC_014029:2607666:262002126200212620719699Yersinia pestis Z176003 chromosome, complete genomeMg(2+) transport ATPase protein C4e-1686.3
NC_015759:760671:762920762920763579660Weissella koreensis KACC 15510 chromosome, complete genomeMg2 transporter-C (MgtC) family protein5e-22105
NC_016863:3905875:392578739257873926482696Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1Mg2+ transport protein7e-1582
NC_009348:2738742:274520127452012745689489Aeromonas salmonicida subsp. salmonicida A449, complete genomeMg2+ transporter2e-1273.9
NC_016845:2781438:278480827848082785488681Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,MgtC family magnesium transporter3e-1480.1
NC_010498:1117938:112152611215261122239714Escherichia coli SMS-3-5, complete genomemgtC family protein2e-1584.3
NC_008261:676000:681964681964682686723Clostridium perfringens ATCC 13124, complete genomeMgtC family protein3e-26119
NC_009659:1984980:199812419981241998570447Janthinobacterium sp. Marseille chromosome, complete genomeMgtC family protein6e-0755.8
NC_014640:4293430:429539642953964296085690Achromobacter xylosoxidans A8 chromosome, complete genomeMgtC family protein 27e-1582
NC_014215:322362:325426325426326154729Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,MgtC, Mg2+ transporter protein4e-1582.8
NC_009485:1604942:164236016423601643058699Bradyrhizobium sp. BTAi1 chromosome, complete genomeMgtC-magnesium transport family protein6e-1685.5
NC_014171:4708282:472512947251294725809681Bacillus thuringiensis BMB171 chromosome, complete genomeMgtC/SapB family membrane protein8e-1788.6
NC_017208:4845281:486119048611904861870681Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMgtC/SapB family membrane protein9e-1788.2
NC_003454:822804:839330839330840064735Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeMGTC/SAPB Family membrane protein1e-20101
NC_010582:1771591:178767917876791788389711Streptococcus pneumoniae CGSP14, complete genomemgtC/SapB family protein2e-20100
NC_010468:231000:238753238753239400648Escherichia coli ATCC 8739, complete genomeMgtC/SapB transporter2e-21103
CP002516:246767:254392254392255039648Escherichia coli KO11, complete genomeMgtC/SapB transporter2e-21103
NC_014618:1103239:110423911042391104922684Enterobacter cloacae SCF1 chromosome, complete genomeMgtC/SapB transporter1e-1481.3
NC_007511:1147696:117849511784951179202708Burkholderia sp. 383 chromosome 2, complete sequenceMgtC/SapB transporter5e-1375.9
NC_009633:587562:588277588277589002726Alkaliphilus metalliredigens QYMF chromosome, complete genomeMgtC/SapB transporter3e-30132
NC_009922:2721343:274582227458222746499678Alkaliphilus oremlandii OhILAs, complete genomeMgtC/SapB transporter1e-25117
NC_014618:4114004:413756841375684138224657Enterobacter cloacae SCF1 chromosome, complete genomeMgtC/SapB transporter6e-23108
NC_016902:246767:254392254392255039648Escherichia coli KO11FL chromosome, complete genomeMgtC/SapB transporter2e-21103
NC_013894:1194458:119624511962451196913669Thermocrinis albus DSM 14484 chromosome, complete genomeMgtC/SapB transporter2e-1997.1
NC_013440:1624561:164090416409041641377474Haliangium ochraceum DSM 14365, complete genomeMgtC/SapB transporter5e-1789.4
NC_014314:576465:639671639671640084414Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeMgtC/SapB transporter9e-1788.2
NC_011992:3752867:376314037631403763868729Acidovorax ebreus TPSY, complete genomeMgtC/SapB transporter1e-1171.6
NC_015914:5470926:547549154754915475919429Cyclobacterium marinum DSM 745 chromosome, complete genomeMgtC/SapB transporter2e-0964.3
NC_010676:897801:915913915913916620708Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMgtC/SapB transporter2e-1274.3
NC_014652:757381:767295767295767945651Caldicellulosiruptor hydrothermalis 108 chromosome, completemgtc/sapb transporter5e-37155
NC_010001:232976:251342251342252022681Clostridium phytofermentans ISDg, complete genomeMgtC/SapB transporter5e-28125
NC_015277:6213304:621330462133046213975672Sphingobacterium sp. 21 chromosome, complete genomeMgtC/SapB transporter7e-26118
NC_015160:2191919:219667521966752197337663Odoribacter splanchnicus DSM 20712 chromosome, complete genomeMgtC/SapB transporter1e-22107
NC_011206:123791:146114146114146818705Acidithiobacillus ferrooxidans ATCC 53993, complete genomeMgtC/SapB transporter4e-1479.7
NC_010515:2691000:271977827197782720485708Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceMgtC/SapB transporter1e-1377.8
NC_011004:2457778:247669324766932477169477Rhodopseudomonas palustris TIE-1, complete genomeMgtC/SapB transporter4e-1169.7
NC_010625:1513436:153308215330821533576495Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceMgtC/SapB transporter3e-0860.1
NC_014152:1430156:143263214326321433303672Thermincola sp. JR, complete genomeMgtC/SapB transporter5e-37155
NC_014219:83888:101687101687102397711Bacillus selenitireducens MLS10 chromosome, complete genomeMgtC/SapB transporter2e-29130
NC_015275:1573916:157444415744441575139696Clostridium lentocellum DSM 5427 chromosome, complete genomeMgtC/SapB transporter7e-26118
NC_010473:3722571:375102337510233751670648Escherichia coli str. K-12 substr. DH10B, complete genomepredicted Mg(2+) transport ATPase inner membrane protein2e-21103
NC_000913:3624826:365327836532783653925648Escherichia coli K12, complete genomepredicted Mg(2+) transport ATPase inner membrane protein2e-21103
AP010958:4313462:432246543224654323112648Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted Mg(2+) transport ATPase inner membrane protein2e-21103
CP002185:3822470:385103438510343851609576Escherichia coli W, complete genomepredicted Mg(2+) transport ATPase inner membrane protein6e-1995.5
AC_000091:3976888:398451339845133985160648Escherichia coli W3110 DNA, complete genomepredicted Mg(2+) transport ATPase inner membrane protein2e-21103
NC_003366:728859:734586734586735311726Clostridium perfringens str. 13, complete genomeprobable Mg2+ transport protein3e-26120
NC_005125:637333:642318642318642806489Gloeobacter violaceus PCC 7421, complete genomeprobable transport ATPase8e-1065.5
NC_013132:1652477:167272516727251673519795Chitinophaga pinensis DSM 2588, complete genomeprotein of unknown function DUF4774e-1685.9
NC_010552:293703:314715314715315548834Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function DUF4776e-1685.5
NC_010682:1763769:178912917891291789989861Ralstonia pickettii 12J chromosome 1, complete sequenceprotein of unknown function DUF4776e-1582
NC_015275:882022:893928893928894716789Clostridium lentocellum DSM 5427 chromosome, complete genomeprotein of unknown function DUF4774e-22106
NC_007925:1448726:145171714517171452589873Rhodopseudomonas palustris BisB18, complete genomeprotein of unknown function DUF4779e-1788.2
NC_007517:1515493:153368115336811534553873Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF4776e-1685.9
NC_015555:863173:885231885231886034804Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeprotein of unknown function DUF4778e-23108
NC_012108:4907430:492113049211304922095966Desulfobacterium autotrophicum HRM2, complete genomeputative Beta-propeller domains of methanol dehydrogenase type1e-1894.4
NC_012658:545840:555950555950556786837Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative lipoprotein4e-21102
NC_012759:3529657:354177235417723542419648Escherichia coli BW2952 chromosome, complete genomeputative Mg(2+) transport ATPase2e-21103
NC_012731:2739964:274333527433352744030696Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative Mg(2+) transport ATPase3e-1479.7
NC_011001:2085986:208598620859862086693708Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative Mg(2+) transport ATPase1e-1377.8
NC_011748:3983432:402036340203634021010648Escherichia coli 55989, complete genomeputative Mg(2+) transport ATPase3e-21103
NC_008800:2298000:229861222986122299271660Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative Mg(2+) transport ATPase3e-23109
NC_012967:3549880:358474635847463585393648Escherichia coli B str. REL606 chromosome, complete genomeputative Mg(2+) transport ATPase2e-21103
NC_011415:3887997:390039739003973901044648Escherichia coli SE11 chromosome, complete genomeputative Mg(2+) transport ATPase2e-21103
NC_011741:3709081:371924037192403719887648Escherichia coli IAI1 chromosome, complete genomeputative Mg(2+) transport ATPase2e-21103
NC_013508:1862896:188541718854171886070654Edwardsiella tarda EIB202, complete genomeputative Mg(2+) transport ATPase3e-24113
NC_016822:3946500:395929339592933959940648Shigella sonnei 53G, complete genomeputative Mg(2+) transport ATPase2e-21103
NC_013364:4306000:431474443147444315391648Escherichia coli O111:H- str. 11128, complete genomeputative Mg(2+) transport ATPase inner membrane protein2e-21103
CU928145:3983432:402036340203634021010648Escherichia coli 55989 chromosome, complete genomeputative Mg(2+) transport ATPase inner membrane protein3e-21103
CU928160:3709081:371924037192403719887648Escherichia coli IAI1 chromosome, complete genomeputative Mg(2+) transport ATPase inner membrane protein2e-21103
NC_007952:1293024:131401613140161314723708Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative Mg+2 transporter, MgtC/SapB family4e-1273.2
NC_014334:589526:594818594818595489672Lactobacillus casei str. Zhang chromosome, complete genomeputative Mg2+ Transporter-C (MgtC) Family3e-1996.7
NC_009801:3956917:396706639670663967713648Escherichia coli E24377A, complete genomeputative Mg2+ transporter-C (MgtC) family protein2e-21103
NC_010658:3622610:363305836330583633705648Shigella boydii CDC 3083-94, complete genomeputative Mg2+ transporter-C (MgtC) family protein3e-21103
NC_009800:3685651:369656636965663697213648Escherichia coli HS, complete genomeputative Mg2+ transporter-C (MgtC) family protein2e-21103
NC_009138:1583988:159425115942511594691441Herminiimonas arsenicoxydans, complete genomeputative MgtC/SapB transporter (partial)2e-0653.9
NC_007384:3741708:374933337493333749980648Shigella sonnei Ss046, complete genomeputative transport ATPase2e-21103
NC_010159:2955562:296814229681422968840699Yersinia pestis Angola, complete genomeputative transporter, Mg2+ transporter-C (MgtC) family4e-1686.3
NC_006322:717953:732424732424733116693Bacillus licheniformis ATCC 14580, complete genomeSapB2e-1480.5
NC_006270:718169:732641732641733333693Bacillus licheniformis ATCC 14580, complete genomeSapB2e-1480.5
NC_013172:3141739:315204831520483152782735Brachybacterium faecium DSM 4810, complete genomeuncharacterized membrane protein2e-1893.6
NC_011567:2327870:234636823463682347045678Anoxybacillus flavithermus WK1, complete genomeUncharacterized membrane protein9e-1478.6